Pay0011014 (gene) Melon (Payzawat) v1

Overview
NamePay0011014
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionAAA_11 domain-containing protein
Locationchr03: 10570186 .. 10573223 (+)
RNA-Seq ExpressionPay0011014
SyntenyPay0011014
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACTCGCATTCTTTCAATTTTTTGTTTTTCTATGATAGCTTGCATTCTTAATCTTTTCCCCTTTAGTCTTCCCAATGCAATTTCAATCTGAATAGGTTTCGTGGATGTGCAGATAAATGATTAAAGGGTTATGTTGTTTATTTTGGTGATTTCTGCTATTTTCCATTGCAAAAGAAAAAAATGCAAATGTTTATAAATCATATATACGTATACTTTGCCACCTCTTTCAGAAGAGAGTTATCGCATTTGTAATACACGAAAGAAATGTAATACATAATTTTAAATCCTTTAATATTTTGGTCCAAAGTTCAGAAAAGAGGTTCTAAATGCTCTCCGAGTGAAATTTACACTTGCTCTCTGAGGTTCTAAGTGTGTTTTTCATCCTTTTCTAAACTCATATCAAAATATCATTATCTTGTGACAAATAATAATATGTGACAAAGTTGTTTTGGTTAAAAGCAAGTCTGTGGCACGAAAAGTATGTTGTTAATTCTCTATAAATTGAGGTTGTCATGTCAGTTTCATATTTACACGTATTCATAATCAAATTTCATTTAATGAGTGACATATTTGTTTAACAGCTTTCAGCTATACCACAGATGTGATGTTGGAGCAGGTTCTTGTTAGTAGTTCTCTTTAGGGAGTCCGGTTCGTTTGGCAATTGCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTCTTTTTTCTATTTCATGGAATTTATGGCTGGAGAGAAATAGGATATTCTTATGGATACATAAAATTATTGGAGGAGGTTTGGAGTGTGAAAAATTTAAATGCCTCTCTTCGGGAAATTTTGTTTTAAAGAGTTATGTGATATGTGTTATTTTTTGTTCTTATCAATTAGAGCAATCTCTTGTTATGTTGCTTTATGTCTTGTTTTGTTCTCTGTTGTTCGAAAGTTCTTTTCAGTAGGTTCTGATGATGGTGGAGATGGGAAAAAGCCAAAAAACTCACTAAAGTGTGCACAATGTTCCTTCCTTTAACAAAAACATTTACAAGGTTCTTGCATTCATCTTCACATTAAATTTAGTTCGGAGTTACTTTTCAGAATTATTTTTATGCTGCAAAGCTTTTAGTACATAGAGCTTTATCCTTTTGGTGACAGGCTATATGATACTTGGTTCACTTCAGTCTATGCCTCTTTCAGGTTGACTGCCCATTTCTTAATTCTCTTGGGGCAAGGAGAGCTGAGGAAGTAGTGGATAGTGGACTTGGGAGCCGAGAATGGGGAAAGTCTGATCCTTTCTCTTTTTTATTCTAGTGATGTAATGCAATACCTTTTTCTTTTATTTCCTTTTTTAAAAATGATTTTCAGTCTTCTATTTTATCTTTTTCCTTCTCATTATTATTCTTATCCAAAAATGCACTTCTATGAATATATTGTTTTTATTCAGAAAATAAGGCTGTTTGGAAAGCATGTCTTGGAACAAATTTCAAACACAAAGGGTCTCACTTCTGGATTGGAGTTTCTTTGTTCTTCTGACTACTCATTATCTGTCATCTTTCTGGGAAAGAGACATGCACTGAAACTGGTAATCGAAATTCTAATCTAAGCTAGGTTTGTATTAATATTTGGTTGAAGTTGTTTAGAAACCAGGTAGTAAGTGTTAGTTAGCTCTTAGTGGTCTTAAAGGGTTCATGATTTTTATACGAGAATGCAATTAGGAAGAAGTAAAGTGTATGGGATTATCTCTATGTTGAATAAATTATTAATTTTATAGTAATTGTACATGATATGTAAGAGATCTATTAGATATTAACTTAATAATTTGTGGCTTATTATAATATTTTAAGTATATAAATTAAATAAAAGGAAAAGTTTTAAAAGGCTAAAGGTGGTTTTAGACGGGGGGAGAAAGGATTTCAGGGTGCGAAGGCCTAATCCTTTAAAAGGATCCCCTTCCTTGAGTAGCTCTTTTTTTCGTACGTTTATTTATTCTTCTCTATTAGTTGAGTCAACTTTTTCTGCTCTATAAATCGCCTTGGGAAGAAGATACCTTGTTAGTTGGCCAGGTTTACTATATTCTTTGTAACTGGACAATGAATGCTGACATCAATGGTAGATGGAATGTGAGATTCGACATATGAGAAAGAGAAGTTGAACTTTCTCCTTCATAACTAGTAGTTTCAACTATGGGATTCCTTTCTGAGATATGTATTTACCTTCATTTTCATTGTTTCTATTCTATTTCGATAAGCATTGTCTCAACAATTTTTTGATGCTTTGATACATCTTGCAACTCCTTTATAATAATTGTTCAAGCACATATCTTTCACTGCTTTTGTTACTATCAAGGGTGACTGGCCTTCCCAATCATAATTTACAAGAGATTTAAAGGATTTGCTTTGTTTCATAAGATTTGAATGAGTGTGGTTTATGGTGTTGACTGCTCATACTGTTCTTACGTGATTCTATTGTAAACTGCTTAATGTAAAATGTAAGATGATGTGCTTCTAGTTGATGAATGATTGCAAGGCTGAAAATGGAAGCTCTAGAGGTTGATTTTCGATGTTGTTGATTTTGTTGTTATTTTTCCACAAATTGCTATGAAATTGTTTTGGTATGTAATCTTTGGAATGTCAGTGTCTTTGTGATTTTTTTTTTCTTTTTATTTATAGGCTTTTCACATAAGAAGATTATCGACTTTTTTAGCAAAGCAAACTCAATCGCAAGCTTCTCCTTTAGGAGAATCTTTTCTTTACCACTTCTCAGTCAGCATGGTATAGAAATTCTTGTGCAAGTATGCTTGTCAATCCCTGTTTATAACTCTAGAGCTAGTCTACTATGTAATTAGATGCATTCTTCGTTGTGCTTCTTGTTGGAACTATTAGATTTTTTAGTTTTTGGCATTCTTTGTCGCTTCTTTTATAATTTTTTACCGGCATAAGTAATGCAATAACTATTTGATAAAATATTGCTGTTTGAACCAATTTTAACTTGACATTATTGTATTTTGGTTTAGGTTGTGGAATTCAAGTTTGTATTTGAAGCCAAGTTCATTCAAGTTCATTGA

mRNA sequence

ATGGTACTCGCATTCTTTCAATTTTTTAAAATAAGGCTGTTTGGAAAGCATGTCTTGGAACAAATTTCAAACACAAAGGGTCTCACTTCTGGATTGGAGTTTCTTTGTTCTTCTGACTACTCATTATCTGTCATCTTTCTGGGAAAGAGACATGCACTGAAACTGGTTGTGGAATTCAAGTTTGTATTTGAAGCCAAGTTCATTCAAGTTCATTGA

Coding sequence (CDS)

ATGGTACTCGCATTCTTTCAATTTTTTAAAATAAGGCTGTTTGGAAAGCATGTCTTGGAACAAATTTCAAACACAAAGGGTCTCACTTCTGGATTGGAGTTTCTTTGTTCTTCTGACTACTCATTATCTGTCATCTTTCTGGGAAAGAGACATGCACTGAAACTGGTTGTGGAATTCAAGTTTGTATTTGAAGCCAAGTTCATTCAAGTTCATTGA

Protein sequence

MVLAFFQFFKIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLVVEFKFVFEAKFIQVH
Homology
[Close]
BLAST of Pay0011014 vs. ExPASy TrEMBL
Match: A0A1S3BDH7 (uncharacterized protein LOC103488695 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488695 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20
Identity = 65/106 (61.32%), Postives = 68/106 (64.15%), Query Frame = 0 

Query: 1   MVLAFF-QFFKIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL---- 60
           ++L+FF    KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL    
Sbjct: 9   LILSFFYSSDKIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLAFHI 68

Query: 61  ------------------------------VVEFKFVFEAKFIQVH 72
                                         VVEFKFVFEAKFIQVH
Sbjct: 69  RRLSTFLAKQTQSQASPLGESFLYHFSVSMVVEFKFVFEAKFIQVH 114

[Close]
BLAST of Pay0011014 vs. ExPASy TrEMBL
Match: A0A1S3BDH8 (uncharacterized protein LOC103488695 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488695 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20
Identity = 62/96 (64.58%), Postives = 62/96 (64.58%), Query Frame = 0 

Query: 10 KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL-------------- 69
          KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL              
Sbjct: 4  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLAFHIRRLSTFLAKQ 63

Query: 70 --------------------VVEFKFVFEAKFIQVH 72
                              VVEFKFVFEAKFIQVH
Sbjct: 64 TQSQASPLGESFLYHFSVSMVVEFKFVFEAKFIQVH 99

[Close]
BLAST of Pay0011014 vs. ExPASy TrEMBL
Match: A0A5A7V0K3 (Helicase SEN1 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00530 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 10  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLV 57
           K+R FGKHVLEQISNTKGL+ GLEFLCSS++SLS +FLG RHALKLV
Sbjct: 689 KVRQFGKHVLEQISNTKGLSCGLEFLCSSEHSLSAVFLGMRHALKLV 735

[Close]
BLAST of Pay0011014 vs. ExPASy TrEMBL
Match: A0A1S4E3P9 (uncharacterized protein LOC103500612 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103500612 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 10  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLV 57
           K+R FGKHVLEQISNTKGL+ GLEFLCSS++SLS +FLG RHALKLV
Sbjct: 678 KVRQFGKHVLEQISNTKGLSCGLEFLCSSEHSLSAVFLGMRHALKLV 724

[Close]
BLAST of Pay0011014 vs. ExPASy TrEMBL
Match: A0A1S3CGF3 (uncharacterized protein LOC103500612 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500612 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 10  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLV 57
           K+R FGKHVLEQISNTKGL+ GLEFLCSS++SLS +FLG RHALKLV
Sbjct: 457 KVRQFGKHVLEQISNTKGLSCGLEFLCSSEHSLSAVFLGMRHALKLV 503

[Close]
BLAST of Pay0011014 vs. NCBI nr
Match: XP_008445773.1 (PREDICTED: uncharacterized protein LOC103488695 isoform X2 [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 62/96 (64.58%), Postives = 62/96 (64.58%), Query Frame = 0 

Query: 10 KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL-------------- 69
          KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL              
Sbjct: 4  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLAFHIRRLSTFLAKQ 63

Query: 70 --------------------VVEFKFVFEAKFIQVH 72
                              VVEFKFVFEAKFIQVH
Sbjct: 64 TQSQASPLGESFLYHFSVSMVVEFKFVFEAKFIQVH 99

[Close]
BLAST of Pay0011014 vs. NCBI nr
Match: XP_008445765.1 (PREDICTED: uncharacterized protein LOC103488695 isoform X1 [Cucumis melo] >XP_008445766.1 PREDICTED: uncharacterized protein LOC103488695 isoform X1 [Cucumis melo] >XP_008445769.1 PREDICTED: uncharacterized protein LOC103488695 isoform X1 [Cucumis melo] >XP_008445770.1 PREDICTED: uncharacterized protein LOC103488695 isoform X1 [Cucumis melo] >XP_008445772.1 PREDICTED: uncharacterized protein LOC103488695 isoform X1 [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 65/106 (61.32%), Postives = 68/106 (64.15%), Query Frame = 0 

Query: 1   MVLAFF-QFFKIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL---- 60
           ++L+FF    KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKL    
Sbjct: 9   LILSFFYSSDKIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLAFHI 68

Query: 61  ------------------------------VVEFKFVFEAKFIQVH 72
                                         VVEFKFVFEAKFIQVH
Sbjct: 69  RRLSTFLAKQTQSQASPLGESFLYHFSVSMVVEFKFVFEAKFIQVH 114

[Close]
BLAST of Pay0011014 vs. NCBI nr
Match: KAA0059329.1 (helicase SEN1 isoform X4 [Cucumis melo var. makuwa])

HSP 1 Score: 81.3 bits (199), Expect = 3.8e-12
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 10  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLV 57
           K+R FGKHVLEQISNTKGL+ GLEFLCSS++SLS +FLG RHALKLV
Sbjct: 689 KVRQFGKHVLEQISNTKGLSCGLEFLCSSEHSLSAVFLGMRHALKLV 735

[Close]
BLAST of Pay0011014 vs. NCBI nr
Match: XP_016902852.1 (PREDICTED: uncharacterized protein LOC103500612 isoform X2 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 3.8e-12
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 10  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLV 57
           K+R FGKHVLEQISNTKGL+ GLEFLCSS++SLS +FLG RHALKLV
Sbjct: 506 KVRQFGKHVLEQISNTKGLSCGLEFLCSSEHSLSAVFLGMRHALKLV 552

[Close]
BLAST of Pay0011014 vs. NCBI nr
Match: XP_016902853.1 (PREDICTED: uncharacterized protein LOC103500612 isoform X4 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 3.8e-12
Identity = 38/47 (80.85%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 10  KIRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLV 57
           K+R FGKHVLEQISNTKGL+ GLEFLCSS++SLS +FLG RHALKLV
Sbjct: 678 KVRQFGKHVLEQISNTKGLSCGLEFLCSSEHSLSAVFLGMRHALKLV 724

[Close]
BLAST of Pay0011014 vs. TAIR 10
Match: AT1G16800.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.5e-06
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0 

Query: 11  IRLFGKHVLEQISNTKGLTSGLEFLCSSDYSLSVIFLGKRHALKLV 57
           +R FGK +LE +SNT+GL+ GL+FLCS    L  +  G RH L+ V
Sbjct: 564 VRQFGKSMLEHVSNTRGLSCGLKFLCSQTSHLLFVSSGVRHVLQQV 609

The following BLAST results are available for this feature:
BLAST of Pay0011014 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0011014 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BDH75.3e-2061.32uncharacterized protein LOC103488695 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BDH85.3e-2064.58uncharacterized protein LOC103488695 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7V0K31.8e-1280.85Helicase SEN1 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A1S4E3P91.8e-1280.85uncharacterized protein LOC103500612 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CGF31.8e-1280.85uncharacterized protein LOC103500612 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Pay0011014 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445773.11.1e-1964.58PREDICTED: uncharacterized protein LOC103488695 isoform X2 [Cucumis melo][more]
XP_008445765.11.1e-1961.32PREDICTED: uncharacterized protein LOC103488695 isoform X1 [Cucumis melo] >XP_00... [more]
KAA0059329.13.8e-1280.85helicase SEN1 isoform X4 [Cucumis melo var. makuwa][more]
XP_016902852.13.8e-1280.85PREDICTED: uncharacterized protein LOC103500612 isoform X2 [Cucumis melo][more]
XP_016902853.13.8e-1280.85PREDICTED: uncharacterized protein LOC103500612 isoform X4 [Cucumis melo][more]
BLAST of Pay0011014 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G16800.11.5e-0650.00P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0011014.1Pay0011014.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004386 helicase activity