Pay0011006 (gene) Melon (Payzawat) v1

Overview


Name	Pay0011006
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Small polypeptide DEVIL 4
Location	chr05: 15710924 .. 15711727 (+)
RNA-Seq Expression	Pay0011006
Synteny	Pay0011006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATGGGAGTTTGTCTGGTGGGTTAAGGGGACAAAGGCAGAGGGGTTTGATGGTCCAATTCCCGCTGAGACCTTCTCTTTTCTCTATATATATATAAGAAGCAGAATCCTTCTTTCCCCTAAACATTTCTTCAACCAAAGCAATCCAATTGACACAACAAAACAAACAACGTCACACACAAATTAAAATGAAGATCATGATGATGTCGAGTAGTGGAAGCTCCAAGAGAAGGCTTTCATCATCTCCAAGTAGAGGATTTGGAGGAGTTCTTAGAGAGCAAAGGGCTAAGCTTTACATTATTAGAAGATGTGTTGTTATGCTTCTTTGTTGGCATGATTAATTAGATGGTGTTATTGAAGATCAACAAAATTAACACAATAGGTTTTTCTTCTTCTTCTTTTTTTTTTCTTTTTTTTTTTTTCCAAATTATTGTTTTTATTTAATTATTTTGGAGTGTAAATAGAGGGTAGCTAGGAAGAGAAAGACGACATGGATGGAAGAGTTTTTTTCTTTTTCCACGACAGATTTTTGGTAGATTTAATTTGGCCTTGTTCTGGGTCACAAGATGTGTAAAAATATTAGAGGGAAAAAGGAAACTCTTAATTATCAACTTTGGATCTACTTTTTGATTTCATCTCTTTCTTTTTCTTTCTAAAGTGAATTTGGATATGTTTTCCTTCTTGTCTCTTTCTTTCCTGTCCTTGAGTATTGAGCATTTGGAGTGTTTTGACTTTGCCCACTTGATCAAAATGAAACCACATATTAATTAATGGGCCTTGTTCTCTCTTTATCTGTAGATC

mRNA sequence

ATGAAAATGGGAGTTTGTCTGGTGGGTTAAGGGGACAAAGGCAGAGGGGTTTGATGGTCCAATTCCCGCTGAGACCTTCTCTTTTCTCTATATATATATAAGAAGCAGAATCCTTCTTTCCCCTAAACATTTCTTCAACCAAAGCAATCCAATTGACACAACAAAACAAACAACGTCACACACAAATTAAAATGAAGATCATGATGATGTCGAGTAGTGGAAGCTCCAAGAGAAGGCTTTCATCATCTCCAAGTAGAGGATTTGGAGGAGTTCTTAGAGAGCAAAGGGCTAAGCTTTACATTATTAGAAGATGTGTTGTTATGCTTCTTTGTTGGCATGATTAATTAGATGGTGTTATTGAAGATCAACAAAATTAACACAATAGGTTTTTCTTCTTCTTCTTTTTTTTTTCTTTTTTTTTTTTTCCAAATTATTGTTTTTATTTAATTATTTTGGAGTGTAAATAGAGGGTAGCTAGGAAGAGAAAGACGACATGGATGGAAGAGTTTTTTTCTTTTTCCACGACAGATTTTTGGTAGATTTAATTTGGCCTTGTTCTGGGTCACAAGATGTGTAAAAATATTAGAGGGAAAAAGGAAACTCTTAATTATCAACTTTGGATCTACTTTTTGATTTCATCTCTTTCTTTTTCTTTCTAAAGTGAATTTGGATATGTTTTCCTTCTTGTCTCTTTCTTTCCTGTCCTTGAGTATTGAGCATTTGGAGTGTTTTGACTTTGCCCACTTGATCAAAATGAAACCACATATTAATTAATGGGCCTTGTTCTCTCTTTATCTGTAGATC

Coding sequence (CDS)

ATGAAGATCATGATGATGTCGAGTAGTGGAAGCTCCAAGAGAAGGCTTTCATCATCTCCAAGTAGAGGATTTGGAGGAGTTCTTAGAGAGCAAAGGGCTAAGCTTTACATTATTAGAAGATGTGTTGTTATGCTTCTTTGTTGGCATGATTAA

Protein sequence

MKIMMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD

Homology

[Close]

BLAST of Pay0011006 vs. ExPASy Swiss-Prot
Match: Q9SAF8 (Small polypeptide DEVIL 4 OS=Arabidopsis thaliana OX=3702 GN=DVL4 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.6e-10
Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 10 GSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          G SKRR+S   S+G G VL+EQRAKLYIIRRCVVMLLCWHD
Sbjct: 4  GGSKRRVS---SKGLGAVLKEQRAKLYIIRRCVVMLLCWHD 41

[Close]

BLAST of Pay0011006 vs. ExPASy Swiss-Prot
Match: Q6IM95 (Small polypeptide DEVIL 6 OS=Arabidopsis thaliana OX=3702 GN=DVL6 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.8e-10
Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 10 GSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          G  KRR+SS  SRG GGVLREQRAKLYII+RCVVMLLCW D
Sbjct: 2  GVLKRRVSS--SRGLGGVLREQRAKLYIIKRCVVMLLCWQD 40

[Close]

BLAST of Pay0011006 vs. ExPASy Swiss-Prot
Match: Q6X5T8 (Small polypeptide DEVIL 5 OS=Arabidopsis thaliana OX=3702 GN=DVL5 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 7.6e-10
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 7  SSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          SS G +KR++    SRG GGV+REQ+AKLYIIRRCVVMLLCWHD
Sbjct: 6  SSVGGTKRKMW---SRGVGGVVREQKAKLYIIRRCVVMLLCWHD 46

[Close]

BLAST of Pay0011006 vs. ExPASy Swiss-Prot
Match: Q6X5U0 (Small polypeptide DEVIL 3 OS=Arabidopsis thaliana OX=3702 GN=DVL3 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.3e-06
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 21 SRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          ++  GG L+EQ+ +LYIIRRCVVML+CWHD
Sbjct: 11 NKKLGGYLKEQKGRLYIIRRCVVMLICWHD 40

[Close]

BLAST of Pay0011006 vs. ExPASy Swiss-Prot
Match: Q6X5V0 (Small polypeptide DEVIL 1 OS=Arabidopsis thaliana OX=3702 GN=DVL1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.5e-05
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1  MKIMMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          MK +MMSS+  SK +   S SR  G  ++EQ+ ++YIIRRC+VMLLC HD
Sbjct: 3  MKRVMMSSAERSKEK-KRSISRRLGKYMKEQKGRIYIIRRCMVMLLCSHD 51

[Close]

BLAST of Pay0011006 vs. ExPASy TrEMBL
Match: A0A1S4DU14 (uncharacterized protein LOC103485763 OS=Cucumis melo OX=3656 GN=LOC103485763 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-17
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0


Query: 1  MKIMMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          MK+MMMSSSGSSKRRLS+SPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 1  MKMMMMSSSGSSKRRLSTSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 50

[Close]

BLAST of Pay0011006 vs. ExPASy TrEMBL
Match: A0A6J1E3C6 (uncharacterized protein LOC111025664 OS=Momordica charantia OX=3673 GN=LOC111025664 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.3e-14
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0


Query: 4  MMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          M ++S GSSKRRL+SSP+RGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 3  MNLNSGGSSKRRLNSSPTRGFGGVLREQRAKLYIIRRCVVMLLCWHD 49

[Close]

BLAST of Pay0011006 vs. ExPASy TrEMBL
Match: A0A6J1EU31 (uncharacterized protein LOC111436587 OS=Cucurbita moschata OX=3662 GN=LOC111436587 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.9e-13
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0


Query: 4  MMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          M ++ SGSSKRR+ SSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 3  MSLNGSGSSKRRI-SSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 48

[Close]

BLAST of Pay0011006 vs. ExPASy TrEMBL
Match: A0A6J1IDN2 (uncharacterized protein LOC111472196 OS=Cucurbita maxima OX=3661 GN=LOC111472196 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-12
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 4  MMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          M ++ SGSSKRR+ S PSRGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 3  MSLNGSGSSKRRI-SCPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 48

[Close]

BLAST of Pay0011006 vs. ExPASy TrEMBL
Match: A0A5N5H9Q0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_015998 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-11
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 4  MMMSSSGS---SKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          M M SSGS   SKRRLSSS S+G GGVLREQRA+LYIIRRCVVMLLCWHD
Sbjct: 1  MKMGSSGSMAGSKRRLSSSSSKGLGGVLREQRARLYIIRRCVVMLLCWHD 50

[Close]

BLAST of Pay0011006 vs. NCBI nr
Match: XP_016899479.1 (PREDICTED: uncharacterized protein LOC103485763 [Cucumis melo] >XP_016899480.1 PREDICTED: uncharacterized protein LOC103485763 [Cucumis melo])

HSP 1 Score: 97.4 bits (241), Expect = 3.6e-17
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0


Query: 1  MKIMMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          MK+MMMSSSGSSKRRLS+SPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 1  MKMMMMSSSGSSKRRLSTSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 50

[Close]

BLAST of Pay0011006 vs. NCBI nr
Match: XP_004138925.1 (uncharacterized protein LOC101205568 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 2.3e-16
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0


Query: 1  MKIMMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          MK+ MMSS GSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 1  MKMTMMSSGGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 50

[Close]

BLAST of Pay0011006 vs. NCBI nr
Match: XP_038875556.1 (uncharacterized protein LOC120067970 [Benincasa hispida])

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-14
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0


Query: 4  MMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          MMMSSSGSSKRR+ SSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 3  MMMSSSGSSKRRI-SSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 48

[Close]

BLAST of Pay0011006 vs. NCBI nr
Match: XP_022159251.1 (uncharacterized protein LOC111025664 [Momordica charantia])

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0


Query: 4  MMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          M ++S GSSKRRL+SSP+RGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 3  MNLNSGGSSKRRLNSSPTRGFGGVLREQRAKLYIIRRCVVMLLCWHD 49

[Close]

BLAST of Pay0011006 vs. NCBI nr
Match: XP_022930103.1 (uncharacterized protein LOC111436587 [Cucurbita moschata] >XP_023552920.1 uncharacterized protein LOC111810443 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 81.6 bits (200), Expect = 2.1e-12
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0


Query: 4  MMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          M ++ SGSSKRR+ SSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD
Sbjct: 3  MSLNGSGSSKRRI-SSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 48

[Close]

BLAST of Pay0011006 vs. TAIR 10
Match: AT1G13245.1 (ROTUNDIFOLIA like 17 )

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-11
Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 10 GSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          G SKRR+S   S+G G VL+EQRAKLYIIRRCVVMLLCWHD
Sbjct: 4  GGSKRRVS---SKGLGAVLKEQRAKLYIIRRCVVMLLCWHD 41

[Close]

BLAST of Pay0011006 vs. TAIR 10
Match: AT3G25717.1 (ROTUNDIFOLIA like 16 )

HSP 1 Score: 63.9 bits (154), Expect = 4.1e-11
Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 10 GSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          G  KRR+SS  SRG GGVLREQRAKLYII+RCVVMLLCW D
Sbjct: 2  GVLKRRVSS--SRGLGGVLREQRAKLYIIKRCVVMLLCWQD 40

[Close]

BLAST of Pay0011006 vs. TAIR 10
Match: AT1G68825.1 (ROTUNDIFOLIA like 15 )

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-11
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 7  SSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          SS G +KR++    SRG GGV+REQ+AKLYIIRRCVVMLLCWHD
Sbjct: 6  SSVGGTKRKMW---SRGVGGVVREQKAKLYIIRRCVVMLLCWHD 46

[Close]

BLAST of Pay0011006 vs. TAIR 10
Match: AT1G68825.2 (ROTUNDIFOLIA like 15 )

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-11
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 7  SSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          SS G +KR++    SRG GGV+REQ+AKLYIIRRCVVMLLCWHD
Sbjct: 6  SSVGGTKRKMW---SRGVGGVVREQKAKLYIIRRCVVMLLCWHD 46

[Close]

BLAST of Pay0011006 vs. TAIR 10
Match: AT5G16023.1 (ROTUNDIFOLIA like 18 )

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-06
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 1  MKIMMMSSSGSSKRRLSSSPSRGFGGVLREQRAKLYIIRRCVVMLLCWHD 51
          MK +MMSS+  SK +   S SR  G  ++EQ+ ++YIIRRC+VMLLC HD
Sbjct: 3  MKRVMMSSAERSKEK-KRSISRRLGKYMKEQKGRIYIIRRCMVMLLCSHD 51

The following BLAST results are available for this feature:

BLAST of Pay0011006 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAF8	2.6e-10	78.05	Small polypeptide DEVIL 4 OS=Arabidopsis thaliana OX=3702 GN=DVL4 PE=2 SV=1	[more]
Q6IM95	5.8e-10	80.49	Small polypeptide DEVIL 6 OS=Arabidopsis thaliana OX=3702 GN=DVL6 PE=3 SV=1	[more]
Q6X5T8	7.6e-10	72.73	Small polypeptide DEVIL 5 OS=Arabidopsis thaliana OX=3702 GN=DVL5 PE=2 SV=1	[more]
Q6X5U0	2.3e-06	66.67	Small polypeptide DEVIL 3 OS=Arabidopsis thaliana OX=3702 GN=DVL3 PE=2 SV=1	[more]
Q6X5V0	1.5e-05	54.00	Small polypeptide DEVIL 1 OS=Arabidopsis thaliana OX=3702 GN=DVL1 PE=1 SV=1	[more]

BLAST of Pay0011006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DU14	1.7e-17	96.00	uncharacterized protein LOC103485763 OS=Cucumis melo OX=3656 GN=LOC103485763 PE=...	[more]
A0A6J1E3C6	5.3e-14	87.23	uncharacterized protein LOC111025664 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1EU31	9.9e-13	87.23	uncharacterized protein LOC111436587 OS=Cucurbita moschata OX=3662 GN=LOC1114365...	[more]
A0A6J1IDN2	3.8e-12	85.11	uncharacterized protein LOC111472196 OS=Cucurbita maxima OX=3661 GN=LOC111472196...	[more]
A0A5N5H9Q0	1.4e-11	82.00	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]

BLAST of Pay0011006 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899479.1	3.6e-17	96.00	PREDICTED: uncharacterized protein LOC103485763 [Cucumis melo] >XP_016899480.1 P...	[more]
XP_004138925.1	2.3e-16	94.00	uncharacterized protein LOC101205568 [Cucumis sativus]	[more]
XP_038875556.1	2.9e-14	95.74	uncharacterized protein LOC120067970 [Benincasa hispida]	[more]
XP_022159251.1	1.1e-13	87.23	uncharacterized protein LOC111025664 [Momordica charantia]	[more]
XP_022930103.1	2.1e-12	87.23	uncharacterized protein LOC111436587 [Cucurbita moschata] >XP_023552920.1 unchar...	[more]

BLAST of Pay0011006 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13245.1	1.9e-11	78.05	ROTUNDIFOLIA like 17	[more]
AT3G25717.1	4.1e-11	80.49	ROTUNDIFOLIA like 16	[more]
AT1G68825.1	5.4e-11	72.73	ROTUNDIFOLIA like 15	[more]
AT1G68825.2	5.4e-11	72.73	ROTUNDIFOLIA like 15	[more]
AT5G16023.1	1.1e-06	54.00	ROTUNDIFOLIA like 18	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 29..47 e-value: 3.0E-12 score: 46.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 4..50
None	No IPR available	PANTHER	PTHR33102:SF64	DVL5-RELATED	coord: 4..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0011006.1	Pay0011006.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane