Pay0010986 (gene) Melon (Payzawat) v1

Overview


Name	Pay0010986
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr09: 6395191 .. 6395627 (+)
RNA-Seq Expression	Pay0010986
Synteny	Pay0010986

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGCGATTCTTTTAACAAGTGTTATGAATTTATTCTTTTAATACAATTCACTGATTTACTATTGAATTTGACAGCCATATCTAGATCATGGAAGTGCAAGGGGAGGCTGTCTCTAAGGTATTCTTTTCTTGGACCAAGTTACATTTCTACTCTTCTATGCCTTCTGCATCTCTTCCATCTTTACTGTTCCACTTCAGTACTGGAGTTGGACCTTGGCCAGTTGGTCCTCGAAATTGTTGCCCTCCAAACCCAAGTTCTGAATCGGAAGTAGGAGATTTCGGATCTGCTCTTATCACGAAGGTTAGAGGCTTCGGCTTTGAATTGGAAGGAAATGTGAGAGAGTTGGGGAATTGCAGTGAGGAGATGGAATGGCCCCCATGGGAGGCGACACATGAGCTTGAGGATAAACTCACCCCTCTGTGCTTGCTGTAA

mRNA sequence

ATGGTTTGCGATTCTTTTAACAAGTGTTATGAATTTATTCTTTTAATACAATTCACTGATTTACTATTGAATTTGACAGCCATATCTAGATCATGGAAGTGCAAGGGGAGGCTGTCTCTAAGTACTGGAGTTGGACCTTGGCCAGTTGGTCCTCGAAATTGTTGCCCTCCAAACCCAAGTTCTGAATCGGAAGTAGGAGATTTCGGATCTGCTCTTATCACGAAGGTTAGAGGCTTCGGCTTTGAATTGGAAGGAAATGTGAGAGAGTTGGGGAATTGCAGTGAGGAGATGGAATGGCCCCCATGGGAGGCGACACATGAGCTTGAGGATAAACTCACCCCTCTGTGCTTGCTGTAA

Coding sequence (CDS)

ATGGTTTGCGATTCTTTTAACAAGTGTTATGAATTTATTCTTTTAATACAATTCACTGATTTACTATTGAATTTGACAGCCATATCTAGATCATGGAAGTGCAAGGGGAGGCTGTCTCTAAGTACTGGAGTTGGACCTTGGCCAGTTGGTCCTCGAAATTGTTGCCCTCCAAACCCAAGTTCTGAATCGGAAGTAGGAGATTTCGGATCTGCTCTTATCACGAAGGTTAGAGGCTTCGGCTTTGAATTGGAAGGAAATGTGAGAGAGTTGGGGAATTGCAGTGAGGAGATGGAATGGCCCCCATGGGAGGCGACACATGAGCTTGAGGATAAACTCACCCCTCTGTGCTTGCTGTAA

Protein sequence

MVCDSFNKCYEFILLIQFTDLLLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPSSESEVGDFGSALITKVRGFGFELEGNVRELGNCSEEMEWPPWEATHELEDKLTPLCLL

Homology

[Close]

BLAST of Pay0010986 vs. ExPASy TrEMBL
Match: A0A1S3CL28 (uncharacterized protein LOC103501668 OS=Cucumis melo OX=3656 GN=LOC103501668 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.1e-65
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MVCDSFNKCYEFILLIQFTDLLLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPS 60
           MVCDSFNKCYEFILLIQFTDLLLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPS
Sbjct: 1   MVCDSFNKCYEFILLIQFTDLLLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPS 60

Query: 61  SESEVGDFGSALITKVRGFGFELEGNVRELGNCSEEMEWPPWEATHELEDKLTPLCLL 119
           SESEVGDFGSALITKVRGFGFELEGNVRELGNCSEEMEWPPWEATHELEDKLTPLCLL
Sbjct: 61  SESEVGDFGSALITKVRGFGFELEGNVRELGNCSEEMEWPPWEATHELEDKLTPLCLL 118

[Close]

BLAST of Pay0010986 vs. ExPASy TrEMBL
Match: A0A5D3C339 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002390 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.2e-42
Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 22   LLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPSSESEVGDFGSALITKVRGFGF 81
            L++  AISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPSSESEVGDFGSALITKVRGFGF
Sbjct: 1022 LISTNAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPSSESEVGDFGSALITKVRGFGF 1081

Query: 82   ELEGNVRELGNCSEEMEWPPWEATH 107
            ELEGNVRELGNCSEEM+WPPWEATH
Sbjct: 1082 ELEGNVRELGNCSEEMKWPPWEATH 1106

[Close]

BLAST of Pay0010986 vs. NCBI nr
Match: XP_008463534.1 (PREDICTED: uncharacterized protein LOC103501668 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 8.4e-65
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MVCDSFNKCYEFILLIQFTDLLLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPS 60
           MVCDSFNKCYEFILLIQFTDLLLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPS
Sbjct: 1   MVCDSFNKCYEFILLIQFTDLLLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPS 60

Query: 61  SESEVGDFGSALITKVRGFGFELEGNVRELGNCSEEMEWPPWEATHELEDKLTPLCLL 119
           SESEVGDFGSALITKVRGFGFELEGNVRELGNCSEEMEWPPWEATHELEDKLTPLCLL
Sbjct: 61  SESEVGDFGSALITKVRGFGFELEGNVRELGNCSEEMEWPPWEATHELEDKLTPLCLL 118

[Close]

BLAST of Pay0010986 vs. NCBI nr
Match: TYK05750.1 (uncharacterized protein E5676_scaffold98G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 181.4 bits (459), Expect = 4.5e-42
Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 22   LLNLTAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPSSESEVGDFGSALITKVRGFGF 81
            L++  AISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPSSESEVGDFGSALITKVRGFGF
Sbjct: 1022 LISTNAISRSWKCKGRLSLSTGVGPWPVGPRNCCPPNPSSESEVGDFGSALITKVRGFGF 1081

Query: 82   ELEGNVRELGNCSEEMEWPPWEATH 107
            ELEGNVRELGNCSEEM+WPPWEATH
Sbjct: 1082 ELEGNVRELGNCSEEMKWPPWEATH 1106

The following BLAST results are available for this feature:

BLAST of Pay0010986 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0010986 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CL28	4.1e-65	100.00	uncharacterized protein LOC103501668 OS=Cucumis melo OX=3656 GN=LOC103501668 PE=...	[more]
A0A5D3C339	2.2e-42	94.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Pay0010986 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463534.1	8.4e-65	100.00	PREDICTED: uncharacterized protein LOC103501668 [Cucumis melo]	[more]
TYK05750.1	4.5e-42	94.12	uncharacterized protein E5676_scaffold98G002390 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0010986 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0010986.1	Pay0010986.1	mRNA