Pay0010836 (gene) Melon (Payzawat) v1

Overview


Name	Pay0010836
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Protein RADIALIS-like 1
Location	chr01: 18494138 .. 18494374 (-)
RNA-Seq Expression	Pay0010836
Synteny	Pay0010836

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGTAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCTGAATGTTTCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTTATCGAAGATTAACGTGA

mRNA sequence

ATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGTAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCTGAATGTTTCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTTATCGAAGATTAACGTGA

Coding sequence (CDS)

ATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGTAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCTGAATGTTTCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTTATCGAAGATTAACGTGA

Protein sequence

MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

Homology

[Close]

BLAST of Pay0010836 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.5e-24
Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 0


Query: 5  TAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKH 64
          +  G   PW+ K+NKAFE+ALAVYDKDTP+RW NV++A+ G+T EEVK+HY++LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGEIPFPYRRLT 79
          IESG++PFP  R T
Sbjct: 63 IESGKVPFPNYRTT 76

[Close]

BLAST of Pay0010836 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.0e-22
Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 3  SMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDV 62
          SM+++G S  WTVKQNKAFE+ALAVYD+DTP+RW NV++A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFPYRRLT 79
          + IE+G +PFP  + T
Sbjct: 65 ESIENGHVPFPDYKTT 79

[Close]

BLAST of Pay0010836 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-21
Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 1  MASMTAHGPST-PWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLV 60
          MAS +    S+  WT KQNKAFE+ALA YD+DTP RW NV+K +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFPYRR 77
          +D+  IE+G +PFP  R
Sbjct: 61 QDINSIENGHVPFPNYR 77

[Close]

BLAST of Pay0010836 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-21
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYDKDTP+RW NV+KA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of Pay0010836 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.8e-19
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 10 STPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGE 69
          S+ WT KQNK FE+ALAVYDKDTP+RW NV+KA+G K+ EEVKRHY +LVED+ +IE   
Sbjct: 9  SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDL 68

Query: 70 IPFP 74
          +P P
Sbjct: 69 VPLP 72

[Close]

BLAST of Pay0010836 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASMTAHGPSTPWT KQNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DVKHIESGEIPFPYRRLT
Sbjct: 61 DVKHIESGEIPFPYRRLT 78

[Close]

BLAST of Pay0010836 vs. ExPASy TrEMBL
Match: A0A0A0K3K0 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.9e-29
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG S+ WT  +NKAFEKALA+YDKDTPERWLNV+KAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DV HIESG+IPFPYR+ T
Sbjct: 61 DVNHIESGQIPFPYRKST 77

[Close]

BLAST of Pay0010836 vs. ExPASy TrEMBL
Match: A0A6J1GKK4 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.9e-29
Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG +  WT KQNKAFEKALAVYD+DTPERWLNV+KAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYRR 77
          DVK IESGE+PFPY R
Sbjct: 61 DVKQIESGEVPFPYGR 76

[Close]

BLAST of Pay0010836 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.0e-29
Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG S  WT KQNKAFEKALA+YDKDTP+RWLNV+KAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYR 76
          DVKHIESG++PFPYR
Sbjct: 61 DVKHIESGKVPFPYR 74

[Close]

BLAST of Pay0010836 vs. ExPASy TrEMBL
Match: A0A0A0K3K5 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169590 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASMTAHGPST WT+ QNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVK HYQLLVE
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIESGEIPFP 74
          DVKHIESG +  P
Sbjct: 61 DVKHIESGRLIEP 73

[Close]

BLAST of Pay0010836 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 161.8 bits (408), Expect = 2.4e-36
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASMTAHGPSTPWT KQNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DVKHIESGEIPFPYRRLT
Sbjct: 61 DVKHIESGEIPFPYRRLT 78

[Close]

BLAST of Pay0010836 vs. NCBI nr
Match: KAE8645640.1 (hypothetical protein Csa_020521 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 8.7e-34
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASMTAHGPST WT+ QNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVK HYQLLVE
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DVKHIESGEIPFPYRR T
Sbjct: 61 DVKHIESGEIPFPYRRST 78

[Close]

BLAST of Pay0010836 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28
Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG +  WT KQNKAFEKALAVYD+DTPERWLNV+KAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYRR 77
          DVK IESGE+PFPY R
Sbjct: 61 DVKQIESGEVPFPYGR 76

[Close]

BLAST of Pay0010836 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG S  WT KQNKAFEKALA+YDKDTP+RWLNV+KAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYR 76
          DVKHIESG++PFPYR
Sbjct: 61 DVKHIESGKVPFPYR 74

[Close]

BLAST of Pay0010836 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG ST WT  +NKAFEKALA+YDKDTPERWLNV+KAIGGKTEE+VKRHYQLL+E
Sbjct: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DV HIE+G+IPFPYR  T
Sbjct: 61 DVNHIENGQIPFPYRNST 77

[Close]

BLAST of Pay0010836 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 4.3e-23
Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 3  SMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDV 62
          SM+++G S  WTVKQNKAFE+ALAVYD+DTP+RW NV++A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFPYRRLT 79
          + IE+G +PFP  + T
Sbjct: 65 ESIENGHVPFPDYKTT 79

[Close]

BLAST of Pay0010836 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 103.2 bits (256), Expect = 9.6e-23
Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 1  MASMTAHGPST-PWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLV 60
          MAS +    S+  WT KQNKAFE+ALA YD+DTP RW NV+K +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFPYRR 77
          +D+  IE+G +PFP  R
Sbjct: 61 QDINSIENGHVPFPNYR 77

[Close]

BLAST of Pay0010836 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-22
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYDKDTP+RW NV+KA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of Pay0010836 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-22
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYDKDTP+RW NV+KA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of Pay0010836 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 95.5 bits (236), Expect = 2.0e-20
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 10 STPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGE 69
          S+ WT KQNK FE+ALAVYDKDTP+RW NV+KA+G K+ EEVKRHY +LVED+ +IE   
Sbjct: 9  SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDL 68

Query: 70 IPFP 74
          +P P
Sbjct: 69 VPLP 72

The following BLAST results are available for this feature:

BLAST of Pay0010836 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58FS3	6.5e-24	62.16	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q9SIJ5	6.0e-22	63.16	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
F4JVB8	1.3e-21	62.34	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q1A173	2.3e-21	69.84	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q8GW75	2.8e-19	65.63	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]

BLAST of Pay0010836 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3V4	1.2e-36	97.44	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K3K0	6.9e-29	82.05	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 S...	[more]
A0A6J1GKK4	6.9e-29	82.89	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1	[more]
A0A1S3BGF6	9.0e-29	85.33	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
A0A0A0K3K5	1.2e-28	87.67	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169590 PE=4 S...	[more]

BLAST of Pay0010836 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036165.1	2.4e-36	97.44	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-...	[more]
KAE8645640.1	8.7e-34	92.31	hypothetical protein Csa_020521 [Cucumis sativus]	[more]
XP_022952074.1	1.4e-28	82.89	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li...	[more]
XP_008447025.1	1.9e-28	85.33	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
XP_008447026.1	4.2e-28	80.77	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]

BLAST of Pay0010836 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21650.1	4.3e-23	63.16	Homeodomain-like superfamily protein	[more]
AT4G39250.1	9.6e-23	62.34	RAD-like 1	[more]
AT1G75250.1	1.6e-22	69.84	RAD-like 6	[more]
AT1G75250.2	1.6e-22	69.84	RAD-like 6	[more]
AT1G19510.1	2.0e-20	65.63	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 1.0E-6 score: 38.3
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..59 e-value: 4.60444E-6 score: 37.555
None	No IPR available	GENE3D	1.10.10.60		coord: 5..72 e-value: 1.1E-22 score: 81.5
None	No IPR available	PANTHER	PTHR43952:SF53	TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED	coord: 2..75
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 2..75
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0010836.1	Pay0010836.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity