Pay0010809 (gene) Melon (Payzawat) v1

Overview


Name	Pay0010809
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	psbP domain-containing protein 5, chloroplastic
Location	chr03: 26367718 .. 26371476 (+)
RNA-Seq Expression	Pay0010809
Synteny	Pay0010809

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACCAATTCCAACATTTAGATGGAAATCATCCTAACAAACTAACTCGTAAGGGAGGCCGGTGGAGTTGCTGACGCAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGAAGCAGCTAGCGAGAGAGAGAACAGGCTGAAGCAGCAATGGCGCTTCTCTATTCTTCTCTTTCTGTTTCTACTTCCACCAACGCGTCTCTTCCTAATCTACCCTTCTTCAGGTTCTATCTCTTTCCATTTTTATCTATCTCATACTCACTGATTGAATTGGTTCTTATCCACTGAAAACTTATTCCTAATTTGTTCTCTAACTCCCAGAAACCAACCCAAAAACTTGCCTTGTCGGAAAAGAATTGGAATGTACACGAAATTCAATCTCTGTTCAACTCCAATCTCAAAACCCACCTCAGAAGATGGATTTCCCAGGAGGGAATTGTTGCTATTTGGGCTTACTTCTTCAGTTGCTTTGTTCTTTCCATCTTTAGGTCAGTTTTTCTTACCGTGGGTTGTTTTTTTTTTCCTGCTTCGTCTTTGTTAAAAATGGCAGCTTAGATAAATTTTGTGATGGATTAGCTTGAGCTAATCGACGGAGGGGCTTGTTTTTTCTTTGAAGTCCTGTAATATTATTGCTGTGAATGACAAAGTCTATCCTTTATTTTCAGGTTCTCTTGCTGAGGAAGAGTTGAAATCTGCCACAATGGTTGATGAAATAAACGCTTATTCTTATACTTATCCGGTGGAGTTGTCGTCTACTAATTTTGCCTTTAAATGGTAGATATTTTTGTTTAAACTGTTTCCTCAGGCTATGGCTCATCCTTACAACAAATATTTGATGAACATATAAAATGAAATGGCAGATTATTGCTCTGACCGTTCTATTTGACTTTGAAGAATCTATATCTTGGCAATGTGACCTGACTCTTAGATTCCACAATCAAAATTTTGGAAATCTTTCGAGGAAAAAAGGTTGCTGTTTGATGGTTAAAGGCTTAAAGCATCGATTGACTCTTTGGTATTTTTGTTTCCTAGAAAACGTTATTTCAGGCAGTCAAAAACAGGTTTCTGTAAGGTTTTTCACTTGGAACTAGGCTTCGCTACCAACCATAAATCCTATTAGAAATGACTTTACAAGTGCTTGAAAAATTGTTATTTTAGTGCAAAAAAGGGCGTTTGTAATCACTCGAAAGTCACTACAAACAGCTCAAGTCGTCTTCAATTCTGAACATGTGATGTAAATTTGAAAGATTAGCATCGCATTTGGTGTGTTATTATCTATGAAGTATGAAGTTTAAGTTCACTACCAATATGATGCCATTTTGATTATTGATTAAGACTCTTAACTTTAATTGGAAAATAATCTCCATCTTTTTTATTGTTGAGTGCTTTTGGCCTTTCGGCTTCATTTTTTCTTGTACCATTTAACTCTTTTGACATTTGCTTACGTTTTTTTTCCCTCTCCCCATCATTGTTTCATGTCCTTAAATCATATGTTACCTAACTCTTTCATCTTTTCAAGGGTGGAGTCAAGAAAACCAGAACGTTATTCGTCGGCTGCTCCATTGTCTCGTAAGTTTAACTTAGATTCCAAGACCCAACAGACGAAACATGTTCTGTTCTTTGAGCAGCATAAAATTTCATCCAACCATTAGAGACTTGTGATACAATGAAAAGAATGATAAAACTTCACTGTTTGGTTTCATTTTATTTTGTGGAATGCTTAATTCATCAAAGAAAATTTATCATTCATTAGTAGCTCTGAGTTTTAAAATGAGTTCCACCGCACTATGCTTGTTTTTCGATTTTGAATTATTTAGCAAAATGAATTTTATGATGCAGATTTTCTTCATATTAACTTCATTTTGTCTCCACATGTCATAGCTGATGCTCGATTGAGGATTGTCTCCGAGAGGGTTGATTTCATTGACAACCTTATCATTTCGGTTACGGTAACTTGTTATTCAATTTGTTAACAATTACTATTTTCTCTTTTTAGTTTGATAGTTTTTATCATCTTTTTTGTTTCAGATAGGCCCTCCAAATTCCATATATATAAAATCAAAGGACAAGAGTACTTGGGCAGCAAAAGATGTTGCAGACTCTGTTTTATCCGATAAATCTGCATTGGTAATTCAATATAGTTTGCTTGCTTTCTACCCGTAAATATTTGGACCGATCTATCCTCAGATTATTTGAAGCAATCTCATGTTTTTTCCAAGATTAAAAAAAAAAAAAAGAACACTAGATGGAAGTCCCGTGACACAGAGCCTGAGAGTAGGTTTATGTAGCCATATGAAAAAACCTGGAAAAATGCTGAACTCTACTTTCCACTCAGTTCATTGGAATCCATATCCTAAATACTAAACTTTAACATGAGTCCTTGTTTATTTTGCAGCGGGTGACTTCAAGTCAGCGAATGGCCGAGAGTTCAGTTCTTGATACAAATTCAAGTAATGTAAGTAAACTATGAAGTCCTATTGATGCATATATAGAGCGTTTCTAATTGTCCTCTCACAGATTGATGGTGAGCCATATTGGTATTATGAGTACCTTGTTCGAAAGTCACCAACAAAAATCGTATGTCTTGACTTTTTGAACGCTTTGTTCCCCCTCAGTAGAGGACATTACAAATATTTGATTTCTGAGGAATCTAATGAATCCTGCAGGTCGGAGAATCCAACATTTATAGGCATTATGTTGCATCAACAGCAGAGCGAGATGGTAAATTCTTGATTTTTAGTCTGCATTCTGTCAAACAAGCTATAAATGAGCAAAACCTGCTATGTTATAGCATAACTTCCATCTTGTAACCTGCAAAGCATATTAGAATTTCCTTGTTGATAACTCAGTAAGGTATATTCCTTGCACAATACTTATAGCTCAAGTTTGAACTCAAGAACGGTGAAGGTATTTCTAAACATTCCAAACACTTACATCAAAGCGAAGAGGTAAAAGTATTGCAGTTGGAAAAGAAAACAAGAAAAATGTGTTAGACCTCTGATCGGTGATTTTATGTTGGCTCATCCAAACTTCAGTGAGTGGCTGGAAAATGTGTACGAGTTATTGGTTCTGTCACGATTGATGAATAAGCCTGTTCGTTCTCCTAAATGTTTGTTTTTAGTTTCATGAACTGTGGGCACTAATCATGTTTCAATTGCAGGCTTTCTGTATACCATCAATGCTTCAACACTCGGCGCGCAATGGAACACAGTAAACTCTCTCTTTCTTTAACTTAATGATGATACTTATGTAAAATTAGTACCAAAAATTCCAATAATTGTTTCTTTTTGAGCAGATGGGACCTTTTCTGCAGAAAACCGTAGAGTCTTTTCGACTTCTTCCTCCCACCGAAGACTATGTTCCTCCATACAAGGATCCATGGAGATTCTGGTGACATTTTGTATATCCTCATACATTACTTTCAGGCATTTTTGTATTGTATATTCTTTTTGTTGTGTGGTTTTACCAATGAGTTCTAGTTCACTTTCGAAATCTAGGCATAGTGTCGAGAAGTTATTCTGTGTAAACTTCCATGAAAAGATGGGAGAAAGTAGATCTCTGCCTTGCTTAAGTTCAAAATTTCCTTTATATGGTCAAACTAAATTGCGGATTTGATTGCCTCATCAATACGAAAACGGCACCCTCAACACAGAATAGTGTATGTGAATTTCAAACAATAACATTAGAACATCAGGAGAATAGTATTTAGGACTCTTTGCATCCATCTGTTGTCATTATTTCTTATTC

mRNA sequence

GAACCAATTCCAACATTTAGATGGAAATCATCCTAACAAACTAACTCGTAAGGGAGGCCGGTGGAGTTGCTGACGCAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGAAGCAGCTAGCGAGAGAGAGAACAGGCTGAAGCAGCAATGGCGCTTCTCTATTCTTCTCTTTCTGTTTCTACTTCCACCAACGCGTCTCTTCCTAATCTACCCTTCTTCAGAAACCAACCCAAAAACTTGCCTTGTCGGAAAAGAATTGGAATGTACACGAAATTCAATCTCTGTTCAACTCCAATCTCAAAACCCACCTCAGAAGATGGATTTCCCAGGAGGGAATTGTTGCTATTTGGGCTTACTTCTTCAGTTGCTTTGTTCTTTCCATCTTTAGGTTCTCTTGCTGAGGAAGAGTTGAAATCTGCCACAATGGTTGATGAAATAAACGCTTATTCTTATACTTATCCGGTGGAGTTGTCGTCTACTAATTTTGCCTTTAAATGGGTGGAGTCAAGAAAACCAGAACGTTATTCGTCGGCTGCTCCATTGTCTCCTGATGCTCGATTGAGGATTGTCTCCGAGAGGGTTGATTTCATTGACAACCTTATCATTTCGGTTACGATAGGCCCTCCAAATTCCATATATATAAAATCAAAGGACAAGAGTACTTGGGCAGCAAAAGATGTTGCAGACTCTGTTTTATCCGATAAATCTGCATTGCGGGTGACTTCAAGTCAGCGAATGGCCGAGAGTTCAGTTCTTGATACAAATTCAAGTAATATTGATGGTGAGCCATATTGGTATTATGAGTACCTTGTTCGAAAGTCACCAACAAAAATCGTATGTCTTGACTTTTTGAACGCTTTGTTCCCCCTCAGTAGAGGACATTACAAATATTTGATTTCTGAGGAATCTAATGAATCCTGCAGGTCGGAGAATCCAACATTTATAGGCATTATGTTGCATCAACAGCAGAGCGAGATGGCTTTCTGTATACCATCAATGCTTCAACACTCGGCGCGCAATGGAACACAATGGGACCTTTTCTGCAGAAAACCGTAGAGTCTTTTCGACTTCTTCCTCCCACCGAAGACTATGTTCCTCCATACAAGGATCCATGGAGATTCTGGTGACATTTTGTATATCCTCATACATTACTTTCAGGCATTTTTGTATTGTATATTCTTTTTGTTGTGTGGTTTTACCAATGAGTTCTAGTTCACTTTCGAAATCTAGGCATAGTGTCGAGAAGTTATTCTGTGTAAACTTCCATGAAAAGATGGGAGAAAGTAGATCTCTGCCTTGCTTAAGTTCAAAATTTCCTTTATATGGTCAAACTAAATTGCGGATTTGATTGCCTCATCAATACGAAAACGGCACCCTCAACACAGAATAGTGTATGTGAATTTCAAACAATAACATTAGAACATCAGGAGAATAGTATTTAGGACTCTTTGCATCCATCTGTTGTCATTATTTCTTATTC

Coding sequence (CDS)

ATGGCGCTTCTCTATTCTTCTCTTTCTGTTTCTACTTCCACCAACGCGTCTCTTCCTAATCTACCCTTCTTCAGAAACCAACCCAAAAACTTGCCTTGTCGGAAAAGAATTGGAATGTACACGAAATTCAATCTCTGTTCAACTCCAATCTCAAAACCCACCTCAGAAGATGGATTTCCCAGGAGGGAATTGTTGCTATTTGGGCTTACTTCTTCAGTTGCTTTGTTCTTTCCATCTTTAGGTTCTCTTGCTGAGGAAGAGTTGAAATCTGCCACAATGGTTGATGAAATAAACGCTTATTCTTATACTTATCCGGTGGAGTTGTCGTCTACTAATTTTGCCTTTAAATGGGTGGAGTCAAGAAAACCAGAACGTTATTCGTCGGCTGCTCCATTGTCTCCTGATGCTCGATTGAGGATTGTCTCCGAGAGGGTTGATTTCATTGACAACCTTATCATTTCGGTTACGATAGGCCCTCCAAATTCCATATATATAAAATCAAAGGACAAGAGTACTTGGGCAGCAAAAGATGTTGCAGACTCTGTTTTATCCGATAAATCTGCATTGCGGGTGACTTCAAGTCAGCGAATGGCCGAGAGTTCAGTTCTTGATACAAATTCAAGTAATATTGATGGTGAGCCATATTGGTATTATGAGTACCTTGTTCGAAAGTCACCAACAAAAATCGTATGTCTTGACTTTTTGAACGCTTTGTTCCCCCTCAGTAGAGGACATTACAAATATTTGATTTCTGAGGAATCTAATGAATCCTGCAGGTCGGAGAATCCAACATTTATAGGCATTATGTTGCATCAACAGCAGAGCGAGATGGCTTTCTGTATACCATCAATGCTTCAACACTCGGCGCGCAATGGAACACAATGGGACCTTTTCTGCAGAAAACCGTAG

Protein sequence

MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFPRRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVESRKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVADSVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIVCLDFLNALFPLSRGHYKYLISEESNESCRSENPTFIGIMLHQQQSEMAFCIPSMLQHSARNGTQWDLFCRKP

Homology

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BLAST of Pay0010809 vs. ExPASy Swiss-Prot
Match: P82715 (PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD5 PE=1 SV=3)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-63
Identity = 133/222 (59.91%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 19  PNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPIS--KPTSEDGFPRRELLLFGLTSSVALF 78
           PN   FR +  N+   K  G   +  +  + +S    +SE G  RR+L+L GL+S +++F
Sbjct: 11  PNSRLFRCRSSNI-SSKYHGASKELMIARSGVSTRSISSEKGLSRRDLVLIGLSSPLSMF 70

Query: 79  FPSLG---------SLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVESRKPERYS 138
            P             ++ EELK  TMVD+INAYSY YP++  S    FKWVESRKPERYS
Sbjct: 71  LPLSSPVTHAEEDVKMSGEELKMGTMVDDINAYSYAYPLDYPSEKLVFKWVESRKPERYS 130

Query: 139 SAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVADSVLSDKS 198
           SAAPLSPDARLRIVSERVD  DNL+IS++IGPPNS  + SK+K TW+AK+VADSVLSDKS
Sbjct: 131 SAAPLSPDARLRIVSERVDLTDNLVISISIGPPNS-RLTSKEKKTWSAKEVADSVLSDKS 190

Query: 199 ALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKI 230
           ALRVTSSQR+ ESSVLD ++S+IDGEPYWYYEYLVRKSPTKI
Sbjct: 191 ALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRKSPTKI 230

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BLAST of Pay0010809 vs. ExPASy TrEMBL
Match: A0A1S4DWE4 (psbP domain-containing protein 5, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488254 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 6.4e-123
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP
Sbjct: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES
Sbjct: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. ExPASy TrEMBL
Match: A0A1S4DVK9 (psbP domain-containing protein 5, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488254 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.3e-120
Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP
Sbjct: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES
Sbjct: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIIS  IGPPNSIYIKSKDKSTWAAKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIIS--IGPPNSIYIKSKDKSTWAAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 228

[Close]

BLAST of Pay0010809 vs. ExPASy TrEMBL
Match: A0A0A0LM60 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G379240 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.4e-114
Identity = 216/230 (93.91%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALL SSLSVSTSTN SLPNLPFFRNQPKNLPCRKRIGMY KFN+CST ISKPTSE+G  
Sbjct: 1   MALLNSSLSVSTSTNVSLPNLPFFRNQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLS 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RR+LLLFGLTSSVAL FPSLGSLAEEELK+ATMVDEINAYSYTYP+ELSSTNFAFKWVES
Sbjct: 61  RRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAYSYTYPLELSSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSI+IKSKDKSTWAAKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWY+EYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYFEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. ExPASy TrEMBL
Match: A0A6J1K7I1 (psbP domain-containing protein 5, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492364 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.9e-103
Identity = 199/230 (86.52%), Postives = 212/230 (92.17%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALL SSLS ST TNASLPNL FFRN+P++LP RK IGMY KFNLCST ISK TS + F 
Sbjct: 1   MALLNSSLSFSTPTNASLPNLSFFRNRPRDLPSRKIIGMYKKFNLCSTSISKSTSGNVFS 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RR+LLLFGL+SS  L FPSLGSLAEEELK+ATMVDE+NAYSY YP+EL STNF+FKWVES
Sbjct: 61  RRDLLLFGLSSSFVLTFPSLGSLAEEELKAATMVDEVNAYSYIYPLELPSTNFSFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNS+YIKSKDKSTW AKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSMYIKSKDKSTWTAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQR+AESSVLDT+SSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRLAESSVLDTHSSNIDGEPYWYYEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. ExPASy TrEMBL
Match: A0A6J1EN40 (psbP domain-containing protein 5, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436116 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.9e-103
Identity = 199/230 (86.52%), Postives = 212/230 (92.17%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALL SSLSVST TNASLPNL FF N+P+NLP RK IGMY K +LCST ISK TSE+ F 
Sbjct: 1   MALLNSSLSVSTPTNASLPNLSFFSNRPRNLPSRKIIGMYKKLSLCSTSISKSTSENVFS 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RR+LLLFGL+SS  L FPSLGSLAEE+LK+ATMVDE+NAYSY YP+EL STNFAFKWVES
Sbjct: 61  RRDLLLFGLSSSFVLTFPSLGSLAEEQLKAATMVDEVNAYSYIYPLELPSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNS+YIKSKDKSTW AKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSMYIKSKDKSTWTAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQR+AESSVLDT+SSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRLAESSVLDTHSSNIDGEPYWYYEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. NCBI nr
Match: XP_008445125.1 (PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X1 [Cucumis melo] >XP_016900020.1 PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 450.3 bits (1157), Expect = 1.3e-122
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP
Sbjct: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES
Sbjct: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. NCBI nr
Match: XP_016900021.1 (PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 441.8 bits (1135), Expect = 4.7e-120
Identity = 228/230 (99.13%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP
Sbjct: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES
Sbjct: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIIS  IGPPNSIYIKSKDKSTWAAKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIIS--IGPPNSIYIKSKDKSTWAAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 228

[Close]

BLAST of Pay0010809 vs. NCBI nr
Match: XP_004138754.1 (psbP domain-containing protein 5, chloroplastic [Cucumis sativus] >KGN63133.2 hypothetical protein Csa_022037 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 5.1e-114
Identity = 216/230 (93.91%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALL SSLSVSTSTN SLPNLPFFRNQPKNLPCRKRIGMY KFN+CST ISKPTSE+G  
Sbjct: 1   MALLNSSLSVSTSTNVSLPNLPFFRNQPKNLPCRKRIGMYKKFNVCSTSISKPTSENGLS 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RR+LLLFGLTSSVAL FPSLGSLAEEELK+ATMVDEINAYSYTYP+ELSSTNFAFKWVES
Sbjct: 61  RRDLLLFGLTSSVALSFPSLGSLAEEELKAATMVDEINAYSYTYPLELSSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSI+IKSKDKSTWAAKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIFIKSKDKSTWAAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWY+EYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYFEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. NCBI nr
Match: XP_038884128.1 (psbP domain-containing protein 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 404.1 bits (1037), Expect = 1.1e-108
Identity = 208/230 (90.43%), Postives = 218/230 (94.78%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALL SSLSVST TNAS PNLPFFRN+P+NLPCRKRI MY KFNLCST ISKPTSE+GF 
Sbjct: 1   MALLNSSLSVSTPTNASPPNLPFFRNRPRNLPCRKRIEMYKKFNLCSTSISKPTSENGFC 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RR+LLLFGL+SS  L FPS  SLAEEELK+ATMVDEINAYSYTYPVELSS+NFAFKWVES
Sbjct: 61  RRDLLLFGLSSSFVLSFPSSDSLAEEELKAATMVDEINAYSYTYPVELSSSNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNS+YIKSKDKSTWAAKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSMYIKSKDKSTWAAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQR+AESSVLDT+SSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRLAESSVLDTHSSNIDGEPYWYYEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. NCBI nr
Match: XP_023545350.1 (psbP domain-containing protein 5, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-103
Identity = 200/230 (86.96%), Postives = 212/230 (92.17%), Query Frame = 0


Query: 1   MALLYSSLSVSTSTNASLPNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPISKPTSEDGFP 60
           MALL SSLSVST TNASLPNL FF N+P NLP RK IG+Y KFNLCST ISK TSE+ F 
Sbjct: 1   MALLNSSLSVSTPTNASLPNLSFFSNRPGNLPSRKIIGIYKKFNLCSTSISKSTSENVFS 60

Query: 61  RRELLLFGLTSSVALFFPSLGSLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVES 120
           RR+LLLFGL+SS  L FPSLGSLAEEELK+ATMVDE+NAYSY YP+EL STNFAFKWVES
Sbjct: 61  RRDLLLFGLSSSFVLTFPSLGSLAEEELKAATMVDEVNAYSYIYPLELPSTNFAFKWVES 120

Query: 121 RKPERYSSAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVAD 180
           RKPERYSSAAPLSPDARLRIVSERVDF+DNLIISVTIGPPNS+YIKSKDKSTW AKDVAD
Sbjct: 121 RKPERYSSAAPLSPDARLRIVSERVDFVDNLIISVTIGPPNSMYIKSKDKSTWTAKDVAD 180

Query: 181 SVLSDKSALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKIV 231
           SVLSDKSALRVTSSQR+AESSVLDT+SSNIDGEPYWYYEYLVRKSPTKIV
Sbjct: 181 SVLSDKSALRVTSSQRLAESSVLDTHSSNIDGEPYWYYEYLVRKSPTKIV 230

[Close]

BLAST of Pay0010809 vs. TAIR 10
Match: AT5G11450.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 244.6 bits (623), Expect = 1.0e-64
Identity = 133/222 (59.91%), Postives = 162/222 (72.97%), Query Frame = 0


Query: 19  PNLPFFRNQPKNLPCRKRIGMYTKFNLCSTPIS--KPTSEDGFPRRELLLFGLTSSVALF 78
           PN   FR +  N+   K  G   +  +  + +S    +SE G  RR+L+L GL+S +++F
Sbjct: 11  PNSRLFRCRSSNI-SSKYHGASKELMIARSGVSTRSISSEKGLSRRDLVLIGLSSPLSMF 70

Query: 79  FPSLG---------SLAEEELKSATMVDEINAYSYTYPVELSSTNFAFKWVESRKPERYS 138
            P             ++ EELK  TMVD+INAYSY YP++  S    FKWVESRKPERYS
Sbjct: 71  LPLSSPVTHAEEDVKMSGEELKMGTMVDDINAYSYAYPLDYPSEKLVFKWVESRKPERYS 130

Query: 139 SAAPLSPDARLRIVSERVDFIDNLIISVTIGPPNSIYIKSKDKSTWAAKDVADSVLSDKS 198
           SAAPLSPDARLRIVSERVD  DNL+IS++IGPPNS  + SK+K TW+AK+VADSVLSDKS
Sbjct: 131 SAAPLSPDARLRIVSERVDLTDNLVISISIGPPNS-RLTSKEKKTWSAKEVADSVLSDKS 190

Query: 199 ALRVTSSQRMAESSVLDTNSSNIDGEPYWYYEYLVRKSPTKI 230
           ALRVTSSQR+ ESSVLD ++S+IDGEPYWYYEYLVRKSPTKI
Sbjct: 191 ALRVTSSQRLEESSVLDAHASDIDGEPYWYYEYLVRKSPTKI 230

The following BLAST results are available for this feature:

BLAST of Pay0010809 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82715	1.4e-63	59.91	PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0010809 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWE4	6.4e-123	100.00	psbP domain-containing protein 5, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
A0A1S4DVK9	2.3e-120	99.13	psbP domain-containing protein 5, chloroplastic isoform X2 OS=Cucumis melo OX=36...	[more]
A0A0A0LM60	2.4e-114	93.91	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G379240 PE=4 S...	[more]
A0A6J1K7I1	1.9e-103	86.52	psbP domain-containing protein 5, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EN40	1.9e-103	86.52	psbP domain-containing protein 5, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Pay0010809 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445125.1	1.3e-122	100.00	PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X1 [Cucumis m...	[more]
XP_016900021.1	4.7e-120	99.13	PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X2 [Cucumis m...	[more]
XP_004138754.1	5.1e-114	93.91	psbP domain-containing protein 5, chloroplastic [Cucumis sativus] >KGN63133.2 hy...	[more]
XP_038884128.1	1.1e-108	90.43	psbP domain-containing protein 5, chloroplastic [Benincasa hispida]	[more]
XP_023545350.1	1.1e-103	86.96	psbP domain-containing protein 5, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Pay0010809 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11450.1	1.0e-64	59.91	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 80..246 e-value: 6.2E-8 score: 34.7
None	No IPR available	PANTHER	PTHR31407:SF7	PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC	coord: 34..229
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 34..229
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 92..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0010809.3	Pay0010809.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding