Pay0010327 (gene) Melon (Payzawat) v1

Overview
NamePay0010327
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr03: 21443680 .. 21446656 (-)
RNA-Seq ExpressionPay0010327
SyntenyPay0010327
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTAATCAAACTCAAAGTGAAAACTGAAGAAGAAATTCAAATGGAAGAAGATTAAACCAAAACGTGCTTGTTTTATCAGCTCATCAATCAAGAATCGCAAGAGTAATTGCTCAATCACTGTTCTTCGGTGTTATTCTCCTCTTGATTCCTTACATTACCCCAGTATTCAACGAACAAGGAAAATTCATCTCATTCGATTCCAAAAACCCTAACTTCATAACCAAACAAGAATTCAATGAATTAATTGAAGAGCTGGAAACTGCCGAAATTCTCACAGAGGATAAAATAAGCCTTGTATTCATTCCAAAATCGACGTATTTAAACACGGATGCTCCAAATGATTATGCATATTATTTGAGAAGAATGAGAGCTAATGTAGTAATAGAGAACAAGTTTTTCTGAGGGGATTATTTGAGAATGAATCGTTTGATATCGTGTTCACGATAGGTGTCACACCCCCTCTTAGACTACCTGCTAGCTTAGTCCGAAAAATGGCATGAAGTCGAACGATGTTGCTCTCCTCTAATGATATCTGTCGACTTTACTAAACTCTTGAACCTGATAAACTTGCTAATCTAGTATATAAATTATGAGACACAACATAGACTGATCAAAAACATGAAATCCAAAACATATCAAGGTTTACACAACTGCAATACCTAGAGCTTACACAAACTGTAGAGTATCTATATCGTACAAAGACATATACAACATAACAAAACAAATTTTATGTACAACTCCAACCACGTACTGGCAATTGATATTGGAGCTTCAGCAAACTAAGGCAGTCTATTAGACATCGGAAGCTCGATATCTACCTGAAAAGTGAGAAATATTTTGGAAGGATAAGCTATAAAGCATGAATCAGTTTAAGACTGTAAATTTAAAGATCATAGCACTTAAAAACTTTACACATATAAATCTATTTATTTAAGCCGTAAATATAAACGTGTAATAATAGTAATAACAACTTTCTCAAATACTCAACATGTACATCATTTAAATCTAGCATGACATTTTAAGTATATCAAAACATTTTAACTAACATGACAAATCTATGTTGTGTAGGGCACACCCAATACAACCAACGTTTACAAACTATATGATGTAGTGGGATCCGCTCAGCACTCCCATCGTTTTTGTCGTAGTGGGGCTTGCCTAGCACTCATGATAGCATCGTTGTTACGGAGTACACTCATGTCAACTATAGAATCTAACCTGTGTGTACACGGTACCATATAGCCTTGGACTCAACATCTCAATCATGTAGTTAAAAGAACATCATAAAATCATTAAAACGTGTATGCTATCTTTATCTTTCGTAAAACTCAAACTTACTCAGATTGTTCGTGGAAAACCGAAAATCTAAAAACAATACTTGCTTTAAATGATATGGTTTCAACTACTTTTCAGAAAGTCAATAATAACGTGCTCACATATAAATTTCATCATAAAACTTAAGCTTGAACTTATGCTTGAAACCGTTCATAGAAATCATGTACTATTCATAGAAATATAATCATAGATAAAAGTTTAGAAATTTGTTTTGTCACTCACGGCCTTAGATTTGTTCCTTGGTGTGTAGACTCAACTTATTTCCTCTTTCCCTGTCAAACAAACCAAAACTAAGCGTCAAAACCTTATATAGTATTGTATCTTTATAATAACCTAAGATGATGCACAAAACATGACATTACTCAATTCCAAACTTAAACATAAAAGAGTATTTCTCCTATTTCCCTATAATTTTCCAGATTTAATAGCCTAACTTCAAATATTCATAACTTTCTCCATACTTGACCAAAATTAATGTACTTTAAATTAAACTATTTTTTTTCCCTCCTCTACAACGTACCTGAAGAAAAGAGGGCAGAATTCTCAATAGATAGCTACAGAAATAGCCTAAAACAGAGAGAGTCCAAAAATTGATTCTTCTACTATTCCCTGATTCTTCTACTTCCAATCATATTTAGCCCACAATTTCTTCATAAAAGTTGTAGGAAATTTCATAAGCTTTTCAAACATATCTAATAGAGCTTCTAACTACCTCTGTAAGATCTGGAAAACTTGAAACACTAGAGCATTCATGAATTTTCACCAAAAATTTATGACCTGAATGCCTCTTCGAAAAACATCAATCTAAAATTAGAATTTGCTCATGCTTCCTTCACAAAACTTAAAAGATATTGAGTGAGCTTTTCAAAAAACAAATCTCACCTTTTAATTCTTTCTGAGAAGTCCAAACCGATGCAAAAACTAGAAGATGTCTGTGAACACCAAGCTTCTGCCATGGCTATCTTTCCCTTCATGATTTTCTTCATCTCTTTCACCCTATATCACAAACCTTTCCTCTTCTTCTTCTTCTTGAGATTTTACCTCAACATCTCTGTGAAGTTCAAGGATCCAAACGAGTTGAGAAAATGGGGAAGAAGTGTTTAGCGGTGGAGAAGAAGAATGAGAAAAAAAACCAAATGAACTTCTCTTCTCTCTCACTTTTCCTTTGTCTTTTCTTTATTCCATTTTTTAAAAACAAATATATATATATAATTCCACCTTTGTTTTCATTTTCCTTTTCTTTCGTTTGATTTCTTTTATTCCAAATTGATTAACACAACTTGAACCAAAAGCTTTGCCATTTTCTTATTCAACAACTCAAATTCAACTTCTTATATTATATGACAATAACAAAGAATCCAAAGAGAATCTTGGATTTACATTAGGACAGATCGAAACCTGATTTGTTGACCGTTTTCTTAGAAGTGATGGTGCGGTGGTTGTTTCGGTGAAGGATATTTCTATAAATGTGTATTTTGATGAGATGAAATATAGGTGGGTTTATTTAAAGCCTTACAGAGTTGAAACGAACATCATGGTGGTGGTGAAACCTAGACCGTCAGAACAATTAGACACTGATGGGTTACGCCACCATCGCCGCCGTTGCTACCCAAATTGGCGGTACCATAAACTATGA

mRNA sequence

ATGGATTCTAATCAAACTCAAACTCATCAATCAAGAATCGCAAGAGTAATTGCTCAATCACTGTTCTTCGGTGTTATTCTCCTCTTGATTCCTTACATTACCCCAGTATTCAACGAACAAGGAAAATTCATCTCATTCGATTCCAAAAACCCTAACTTCATAACCAAACAAGAATTCAATGAATTAATTGAAGAGCTGGAAACTGCCGAAATTCTCACAGAGGATAAAATAAGCCTTGTATTCATTCCAAAATCGACGTATTTAAACACGGATGCTCCAAATGATTATGCATATTATTTGAGAAGAATGAGAGCTAATGTAGTAATAGAGAACAAAAGTGATGGTGCGGTGGTTGTTTCGGTGAAGGATATTTCTATAAATGTGTATTTTGATGAGATGAAATATAGGTGGGTTTATTTAAAGCCTTACAGAGTTGAAACGAACATCATGGTGGTGGTGAAACCTAGACCGTCAGAACAATTAGACACTGATGGGTTACGCCACCATCGCCGCCGTTGCTACCCAAATTGGCGGTACCATAAACTATGA

Coding sequence (CDS)

ATGGATTCTAATCAAACTCAAACTCATCAATCAAGAATCGCAAGAGTAATTGCTCAATCACTGTTCTTCGGTGTTATTCTCCTCTTGATTCCTTACATTACCCCAGTATTCAACGAACAAGGAAAATTCATCTCATTCGATTCCAAAAACCCTAACTTCATAACCAAACAAGAATTCAATGAATTAATTGAAGAGCTGGAAACTGCCGAAATTCTCACAGAGGATAAAATAAGCCTTGTATTCATTCCAAAATCGACGTATTTAAACACGGATGCTCCAAATGATTATGCATATTATTTGAGAAGAATGAGAGCTAATGTAGTAATAGAGAACAAAAGTGATGGTGCGGTGGTTGTTTCGGTGAAGGATATTTCTATAAATGTGTATTTTGATGAGATGAAATATAGGTGGGTTTATTTAAAGCCTTACAGAGTTGAAACGAACATCATGGTGGTGGTGAAACCTAGACCGTCAGAACAATTAGACACTGATGGGTTACGCCACCATCGCCGCCGTTGCTACCCAAATTGGCGGTACCATAAACTATGA

Protein sequence

MDSNQTQTHQSRIARVIAQSLFFGVILLLIPYITPVFNEQGKFISFDSKNPNFITKQEFNELIEELETAEILTEDKISLVFIPKSTYLNTDAPNDYAYYLRRMRANVVIENKSDGAVVVSVKDISINVYFDEMKYRWVYLKPYRVETNIMVVVKPRPSEQLDTDGLRHHRRRCYPNWRYHKL
Homology
[Close]
BLAST of Pay0010327 vs. ExPASy TrEMBL
Match: A0A0A0KJZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G427990 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.0e-54
Identity = 133/228 (58.33%), Postives = 153/228 (67.11%), Query Frame = 0 

Query: 1   MDSNQTQTH----------------QSRIARVIAQSLFFGVILLLIPYITPVFNEQGKFI 60
           MDSN+TQ+                 Q  IARVI++SLFFGVIL+LIP ITPVFN+QGKFI
Sbjct: 1   MDSNRTQSELNGRRLNQNAPVLTPLQLSIARVISRSLFFGVILILIPQITPVFNDQGKFI 60

Query: 61  SFDSKNPNFITKQEFNELIEELETAEILTEDKISLVFIPKSTYLNT-DAPNDYAYYLRRM 120
           +FDSK P+ ITKQEF++LI+EL+TAEILTEDK SLVFIP+S+YLNT DAPNDYA YLRRM
Sbjct: 61  TFDSKYPDSITKQEFHDLIDELKTAEILTEDKESLVFIPESSYLNTDDAPNDYADYLRRM 120

Query: 121 RANVVIEN------------------------------KSDGAVVVSVKDISINVYFDEM 180
            A+VVIEN                              +S GAVV+   DIS+NVY DE+
Sbjct: 121 GADVVIENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDISVNVYLDEL 180

Query: 181 KYRWVYLKPYRVETNIMVVVKPRPSEQLDTDGLRHHRRRCYPNWRYHK 182
           KYR VYLK YRVE  IMVV+KPR SEQ D    R HRRR  PNW YHK
Sbjct: 181 KYRCVYLKAYRVERIIMVVMKPRASEQSDAGEKRGHRRR--PNWVYHK 226

[Close]
BLAST of Pay0010327 vs. NCBI nr
Match: KGN48066.1 (hypothetical protein Csa_003441 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-54
Identity = 133/228 (58.33%), Postives = 153/228 (67.11%), Query Frame = 0 

Query: 1   MDSNQTQTH----------------QSRIARVIAQSLFFGVILLLIPYITPVFNEQGKFI 60
           MDSN+TQ+                 Q  IARVI++SLFFGVIL+LIP ITPVFN+QGKFI
Sbjct: 1   MDSNRTQSELNGRRLNQNAPVLTPLQLSIARVISRSLFFGVILILIPQITPVFNDQGKFI 60

Query: 61  SFDSKNPNFITKQEFNELIEELETAEILTEDKISLVFIPKSTYLNT-DAPNDYAYYLRRM 120
           +FDSK P+ ITKQEF++LI+EL+TAEILTEDK SLVFIP+S+YLNT DAPNDYA YLRRM
Sbjct: 61  TFDSKYPDSITKQEFHDLIDELKTAEILTEDKESLVFIPESSYLNTDDAPNDYADYLRRM 120

Query: 121 RANVVIEN------------------------------KSDGAVVVSVKDISINVYFDEM 180
            A+VVIEN                              +S GAVV+   DIS+NVY DE+
Sbjct: 121 GADVVIENSFLPGGLFENEFDIVFTVGQIGARFVDRVLRSGGAVVLPATDISVNVYLDEL 180

Query: 181 KYRWVYLKPYRVETNIMVVVKPRPSEQLDTDGLRHHRRRCYPNWRYHK 182
           KYR VYLK YRVE  IMVV+KPR SEQ D    R HRRR  PNW YHK
Sbjct: 181 KYRCVYLKAYRVERIIMVVMKPRASEQSDAGEKRGHRRR--PNWVYHK 226

[Close]
BLAST of Pay0010327 vs. NCBI nr
Match: KAG6570453.1 (Protein DGS1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-12
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 0 

Query: 10   QSRIARVIAQSLFFGVILLLIPYITPVFNEQGKFISFDSKNPNFITKQEFNELIEELETA 69
            Q RIARV++ SLF  VI LLIP+I PVFN +GKF+SFDSK P+ +T+ EF +L E     
Sbjct: 1129 QPRIARVMSPSLFLAVIFLLIPHIGPVFNHKGKFLSFDSKKPHSMTEPEFYDLPEPCVDC 1188

Query: 70   EILTEDK--------ISLVFIPKSTYLNTDAPNDYAYYLRRMRANVVIE-NKSDGAVVVS 129
             I  + +        +   ++P+ + +N     D  + L ++ A  V    KS   ++V 
Sbjct: 1189 RIQFKHRRRMGSDVVVENNYLPRFSSVNESF--DIVFTLGQLGARFVDRVLKSGSTLIVP 1248

Query: 130  VKDISINVYFDEMKYRWVYLK 142
              D+ +NVY DE+K   VYLK
Sbjct: 1249 ANDMFLNVYLDELKSTCVYLK 1267

[Close]
BLAST of Pay0010327 vs. NCBI nr
Match: KAG6570441.1 (hypothetical protein SDJN03_29356, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-10
Identity = 50/134 (37.31%), Postives = 74/134 (55.22%), Query Frame = 0 

Query: 17  IAQSLFFGVILLLIPYITPVFNEQGKFISFDSKNPNFITKQEFNELIEELETAEILTEDK 76
           ++ SLF  VI LLIP+I PVFN +GKF+SFDSK P+ +TK EF +L E      I  + +
Sbjct: 1   MSPSLFLAVIFLLIPHIGPVFNHKGKFLSFDSKKPHSMTKPEFYDLPEPCVDCRIQFKHR 60

Query: 77  --------ISLVFIPKSTYLNTDAPNDYAYYLRRMRANVVIE-NKSDGAVVVSVKDISIN 136
                   +   ++P+ + +N     D  + L ++ A  V    KS   ++V   D+ +N
Sbjct: 61  RRMGSDVVVENNYLPRFSSVNESF--DIVFTLGQLGARFVDRVLKSGSTLIVPANDMFLN 120

Query: 137 VYFDEMKYRWVYLK 142
           VY DE+K   VYLK
Sbjct: 121 VYLDELKSTCVYLK 132

The following BLAST results are available for this feature:
BLAST of Pay0010327 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0010327 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJZ01.0e-5458.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G427990 PE=4 SV=1[more]
BLAST of Pay0010327 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48066.12.1e-5458.33hypothetical protein Csa_003441 [Cucumis sativus][more]
KAG6570453.11.2e-1239.01Protein DGS1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6570441.14.1e-1037.31hypothetical protein SDJN03_29356, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Pay0010327 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0010327.1Pay0010327.1mRNA