Pay0010307 (gene) Melon (Payzawat) v1

Overview
NamePay0010307
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Locationchr05: 26595996 .. 26597165 (-)
RNA-Seq ExpressionPay0010307
SyntenyPay0010307
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACACGAGTCAAATCTTGTGTGTCGGCAAAGCACGCGAATGGATAAGCGAACATTCGCAATTCTATGTCATTTACTTAAAAATGTGGCTGGTCTTTCTTCAACTAAAATTGTCGACGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGTTCATGACGTGAAGAACCGCGTCATCCAACGAGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCATATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAATAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCATAGAAGTTCACTATATTTCACCTTTATGTACATCGCACTTAATTGAACGTGTTTATTTCAACTTGCAGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAATGTCCCCGCAGGAGATCGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGGATCTGTGACACGAAAGGGGATTTCGTTTATGTCCTAGCCGGTTGGGAAGGATCCGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTAGAAGTGCCAAATGGTATAACTTCTTTATAATAAAACACCATCGCTTCCTACTTACCTATTTGAAGGTCATAAACAAACCATTTAATAATAGGATATTATTATTTGTGCGATGCGGGATATCCAAACGCGGAGGGGTTTCTCACCCCGTACAGAGGCCAACGGTATCATTTGCAAGAGTGGCGTGGTACTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGTAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTCAAAGGTCGTTGGGCCATTCTTCGTGGAAAGTCGTACTATCCCCTGCAAGTCTAGTGTCGCACCATTCTAGCATGTGTCTTGCTTCACAATTTGATCAACAGGAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGAGGACTCCATGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

mRNA sequence

ATGATACACGAGTCAAATCTTGTGTGTCGGCAAAGCACGCGAATGGATAAGCGAACATTCGCAATTCTATGTCATTTACTTAAAAATGTGGCTGGTCTTTCTTCAACTAAAATTGTCGACGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGTTCATGACGTGAAGAACCGCGTCATCCAACGAGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCATATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAATAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCATAGAAGTTCACTATATTTCACCTTTATGTACATCGCACTTAATTGAACGTGTTTATTTCAACTTGCAGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAATGTCCCCGCAGGAGATCGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGGATCTGTGACACGAAAGGGGATTTCGTTTATGTCCTAGCCGGATATTATTATTTGTGCGATGCGGGATATCCAAACGCGGAGGGGTTTCTCACCCCGTACAGAGGCCAACGGTATCATTTGCAAGAGTGGCGTGGTACTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGTAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTCAAAGGTCGTTGGGCCATTCTTCCATGTGTCTTGCTTCACAATTTGATCAACAGGAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGAGGACTCCATGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

Coding sequence (CDS)

ATGATACACGAGTCAAATCTTGTGTGTCGGCAAAGCACGCGAATGGATAAGCGAACATTCGCAATTCTATGTCATTTACTTAAAAATGTGGCTGGTCTTTCTTCAACTAAAATTGTCGACGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGTTCATGACGTGAAGAACCGCGTCATCCAACGAGAATTTGTACGGTCCGGTGAGACAGTATCTCGACATTTCAACATCATATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAATAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCATAGAAGTTCACTATATTTCACCTTTATGTACATCGCACTTAATTGAACGTGTTTATTTCAACTTGCAGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAATGTCCCCGCAGGAGATCGGCCTACATTCAGAACGCGTAAGGGGGAAATTGCCACAAACGTTCTGGGGATCTGTGACACGAAAGGGGATTTCGTTTATGTCCTAGCCGGATATTATTATTTGTGCGATGCGGGATATCCAAACGCGGAGGGGTTTCTCACCCCGTACAGAGGCCAACGGTATCATTTGCAAGAGTGGCGTGGTACTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCGGTAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTCAAAGGTCGTTGGGCCATTCTTCCATGTGTCTTGCTTCACAATTTGATCAACAGGAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGAGGACTCCATGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG

Protein sequence

MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRVIQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYISPLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDFVYVLAGYYYLCDAGYPNAEGFLTPYRGQRYHLQEWRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWAILPCVLLHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Homology
BLAST of Pay0010307 vs. ExPASy TrEMBL
Match: A0A5A7UST8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00660 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 8.6e-150
Identity = 275/363 (75.76%), Postives = 284/363 (78.24%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQF 362

BLAST of Pay0010307 vs. ExPASy TrEMBL
Match: A0A5D3D7X8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001080 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.3e-149
Identity = 274/363 (75.48%), Postives = 284/363 (78.24%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQF 362

BLAST of Pay0010307 vs. ExPASy TrEMBL
Match: A0A5D3BUL1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00150 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.5e-149
Identity = 275/363 (75.76%), Postives = 283/363 (77.96%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDSRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAVDSRIVRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMK+SS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKYSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDVDDEDE DS YATTTA EDI+YIETTNEWSQWRDDLAE MFTEWQL
Sbjct: 326 LHNLINREMTYCDDVDDEDEGDSTYATTTALEDIKYIETTNEWSQWRDDLAELMFTEWQL 362

BLAST of Pay0010307 vs. ExPASy TrEMBL
Match: A0A5A7TXM1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001020 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.2e-148
Identity = 271/363 (74.66%), Postives = 282/363 (77.69%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LL +LRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLVILRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLG LDGTYIKVNVPAGDRPTFRTRKGEIATN+LG+CDTKGDF
Sbjct: 146 ----------------NCLGTLDGTYIKVNVPAGDRPTFRTRKGEIATNILGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQF 362

BLAST of Pay0010307 vs. ExPASy TrEMBL
Match: A0A5A7U2E3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001320 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 274/363 (75.48%), Postives = 282/363 (77.69%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSSTKIVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTKIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCL ALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLDALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQ YHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQWYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQF 362

BLAST of Pay0010307 vs. NCBI nr
Match: KAA0056561.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 539.7 bits (1389), Expect = 1.8e-149
Identity = 275/363 (75.76%), Postives = 284/363 (78.24%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQF 362

BLAST of Pay0010307 vs. NCBI nr
Match: KAA0031556.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0036353.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038064.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0038976.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 537.7 bits (1384), Expect = 6.7e-149
Identity = 274/363 (75.48%), Postives = 284/363 (78.24%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRD+LA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDNLAASMFTDWQF 362

BLAST of Pay0010307 vs. NCBI nr
Match: TYK02668.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 275/363 (75.76%), Postives = 283/363 (77.96%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDSRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAVDSRIVRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMK+SS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKYSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDVDDEDE DS YATTTA EDI+YIETTNEWSQWRDDLAE MFTEWQL
Sbjct: 326 LHNLINREMTYCDDVDDEDEGDSTYATTTALEDIKYIETTNEWSQWRDDLAELMFTEWQL 362

BLAST of Pay0010307 vs. NCBI nr
Match: KAA0048383.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 535.8 bits (1379), Expect = 2.6e-148
Identity = 271/363 (74.66%), Postives = 282/363 (77.69%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSST+IVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LL +LRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLVILRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCLG LDGTYIKVNVPAGDRPTFRTRKGEIATN+LG+CDTKGDF
Sbjct: 146 ----------------NCLGTLDGTYIKVNVPAGDRPTFRTRKGEIATNILGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQRYHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQF 362

BLAST of Pay0010307 vs. NCBI nr
Match: KAA0048406.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 3.3e-148
Identity = 274/363 (75.48%), Postives = 282/363 (77.69%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           MIHES+LVCRQSTRMD+RTFAILCHLL+NVAGLSSTKIVDVEEMVAMFLHVL HDVKNRV
Sbjct: 26  MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTKIVDVEEMVAMFLHVLAHDVKNRV 85

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           IQREFVRSGETVSRHFNI+LLAVLRLYEELIKRPVPV SNCNDQRWKCFE          
Sbjct: 86  IQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFE---------- 145

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
                           NCL ALDGTYIKVNVPAGDRPTFRTRKGEIATNVLG+CDTKGDF
Sbjct: 146 ----------------NCLDALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDF 205

Query: 181 VYVLA--------------------------GYYYLCDAGYPNAEGFLTPYRGQRYHLQE 240
           VYVLA                          GYYYLCDAGYPNAEGFL PYRGQ YHLQE
Sbjct: 206 VYVLAGWEGSAADSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQWYHLQE 265

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWA----------------ILPCVL 300
           WRG ANAPTNAKEYFNMKHSS RNVIERAFGVLKGRWA                IL C L
Sbjct: 266 WRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPLQVQCRTILACAL 325

Query: 301 LHNLINRKMTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQL 322
           LHNLINR+MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRDDLA SMFT+WQ 
Sbjct: 326 LHNLINREMTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQF 362

BLAST of Pay0010307 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 4.1e-27
Identity = 81/280 (28.93%), Postives = 121/280 (43.21%), Query Frame = 0

Query: 1   MIHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRV 60
           +++  N  C ++ RMDK  F  LC LL+    L  T  + +E  +A+FL ++ H+++ R 
Sbjct: 34  ILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRA 93

Query: 61  IQREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYIS 120
           +Q  F  SGET+SRHFN +L AV+ + ++                            +  
Sbjct: 94  VQELFCYSGETISRHFNNVLNAVIAISKD----------------------------FFQ 153

Query: 121 PLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDF 180
           P   S  +E      ++C+G +D  +I V V   ++  FR   G +  NVL        F
Sbjct: 154 PNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRF 213

Query: 181 VYVLAGY--------------------------YYLCDAGYPNAEGFLTPYRGQRYHLQE 240
            YVLAG+                          YY+ D  YPN  GF+ PY G       
Sbjct: 214 NYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV------ 273

Query: 241 WRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGRWAIL 255
              + N+   AKE FN +H  +   I R FG LK R+ IL
Sbjct: 274 ---STNSREEAKEMFNERHKLLHRAIHRTFGALKERFPIL 276

BLAST of Pay0010307 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-24
Identity = 81/281 (28.83%), Postives = 121/281 (43.06%), Query Frame = 0

Query: 2   IHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRVI 61
           + +    C Q  RM    F  LC++L+    L  T  + +EE VAMFL +  H+   R +
Sbjct: 59  LQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDV 118

Query: 62  QREFVRSGETVSRHFNIILLAVLRLYEELIKRPVPVISNCNDQRWKCFEVGIIEVHYISP 121
              F R+ ETV R F  +L A   L  + I+ P         + ++  E   ++  Y   
Sbjct: 119 GLRFGRNQETVQRKFREVLTATELLACDYIRTPT------RQELYRIPERLQVDQRYWP- 178

Query: 122 LCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICDTKGDFV 181
                     YF+    +GA+DGT++ V V    +  +  R    + N++ ICD K  F 
Sbjct: 179 ----------YFS--GFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFT 238

Query: 182 YVLAG---------------------------YYYLCDAGYPNAEGFLTPYRGQ-----R 241
           Y+  G                            YYL D+GYPN +G L PYR       R
Sbjct: 239 YIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVR 298

Query: 242 YHLQEWRGTANAPTNAKEYFNMKHSSVRNVIERAFGVLKGR 251
           YH+ ++      P N  E FN  H+S+R+VIER F + K +
Sbjct: 299 YHMSQFY-YGPRPRNKHELFNQCHTSLRSVIERTFRIWKNK 319

BLAST of Pay0010307 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-16
Identity = 58/181 (32.04%), Postives = 82/181 (45.30%), Query Frame = 0

Query: 180 FVYVLAGY----------------YYLCDAGYPNAEGFLTPYRGQRYHLQEWRGTANAPT 239
           F+YVL+G+                +YL D G+ N   FL P+RG RYHLQE+ G    P 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRKFYLVDCGFANRLNFLAPFRGVRYHLQEFAGQRRDPE 84

Query: 240 NAKEYFNMKHSSVRNVIERAFGVLKGRWAI----------------LPCVLLHNLINRKM 299
              E FN++H S+RNVIER FG+ K R+AI                L C  LHN + RK 
Sbjct: 85  TPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFL-RKE 144

Query: 300 TYCDDVDDEDE---------EDSMYATTTASEDIQYIETTNE----WSQWRDDLAESMFT 316
              D+ D  DE          +     T   ++ + +E   +     + WR  +AE M+ 
Sbjct: 145 CRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWRKSMAEDMWK 204

BLAST of Pay0010307 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 6.3e-12
Identity = 62/244 (25.41%), Postives = 99/244 (40.57%), Query Frame = 0

Query: 2   IHESNLVCRQSTRMDKRTFAILCHLLKNVAGLSSTKIVDVEEMVAMFLHVLVHDVKNRVI 61
           I+ + + C+   RM    F  LC +L    GL S+  + ++E VA+FL +   +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 62  QREFVRSGETVSRHFNIILLAVLRLYEELIK----RPVPVISN--CNDQRWKCFEVGIIE 121
              F  + ET+ R F+ +L A+ RL  E I+      +  ISN   +D R+  F + ++ 
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLMDLLG 136

Query: 122 VHYISPLCTSHLIERVYFNLQNCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGICD 181
           +   + L    L     +      G+     + ++    D P F               D
Sbjct: 137 IASFNVLAICDLDMLFTYCFVGMAGSTHDARV-LSAAISDDPLFHVPP-----------D 196

Query: 182 TKGDFVYVLAGYYYLCDAGYPNAEGFLTPYRGQRYHLQEWRGTANAPTNAKEYFNMKHSS 240
           +K          YYL D+GY N  G+L PYR +    Q+         N  E  N+K   
Sbjct: 197 SK----------YYLVDSGYANKRGYLAPYRREHREAQDIISNNFLTVNLFETHNIKDYD 238

BLAST of Pay0010307 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-10
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0

Query: 188 YYLCDAGYPNAEGFLTPYRGQRYHLQEWRGTANAPTNAKEYFNMKHSSVRNVIERAFGVL 247
           YYL ++ YP   G+L P+R   YHL ++ G    P   +E FN KH  +R+VI+R FGV 
Sbjct: 95  YYLVNSVYPTTTGYLGPHRRILYHLGQF-GRGGPPVTVQELFNRKHLDLRSVIDRTFGVW 154

Query: 248 KGRWAIL 255
           K +W IL
Sbjct: 155 KAKWRIL 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UST88.6e-15075.76Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D7X83.3e-14975.48Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BUL15.5e-14975.76Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TXM11.2e-14874.66Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U2E31.6e-14875.48Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0056561.11.8e-14975.76retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0031556.16.7e-14975.48retrotransposon protein [Cucumis melo var. makuwa] >KAA0033743.1 retrotransposon... [more]
TYK02668.11.1e-14875.76retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0048383.12.6e-14874.66retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0048406.13.3e-14875.48retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT5G41980.14.1e-2728.93CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.15.5e-2428.83unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35695.11.1e-1632.04CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G28730.16.3e-1225.41unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10890.11.6e-1044.78unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 184..262
e-value: 1.1E-10
score: 41.4
NoneNo IPR availablePANTHERPTHR22930:SF211NUCLEASE HARBI1-RELATEDcoord: 5..186
NoneNo IPR availablePANTHERPTHR22930:SF211NUCLEASE HARBI1-RELATEDcoord: 183..317
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 183..317
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 5..186

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0010307.1Pay0010307.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding