Pay0010157 (gene) Melon (Payzawat) v1

Overview


Name	Pay0010157
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr04: 15100159 .. 15100868 (-)
RNA-Seq Expression	Pay0010157
Synteny	Pay0010157

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACTTCAAGTAGCATGCAATATGAGTATTAAAAAGTTGAAAGTTTTGGGTGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACAGCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGGCGGATGCATTAGCCACTCTAGCAGTGATGTTTGATTTAATCTTGAATTTGAACTTCATCCAATCCAAATTACAAAGCGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATGCATAAAGTGTAGAGAATATCCATATGAAGCTTCAGAGAATGACAAACGCACAATAAGGAGGTTGGCCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACGATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAACCAAAACAAATTATGATAGACATTCATGAAGGAATATGTGGAACAAATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACGATGGAATCAGACTGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAGCATCTCCATTGCATATCTTGTCAGCACCATGA

mRNA sequence

ATGGGACTTCAAGTAGCATGCAATATGAGTATTAAAAAGTTGAAAGTTTTGGGTGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACAGCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGGCGGATGCATTAGCCACTCTAGCACGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATGCATAAAGTGTAGAGAATATCCATATGAAGCTTCAGAGAATGACAAACGCACAATAAGGAGGTTGGCCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACGATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAACCAAAACAAATTATGATAGACATTCATGAAGGAATATGTGGAACAAATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACGATGGAATCAGACTGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAGCATCTCCATTGCATATCTTGTCAGCACCATGA

Coding sequence (CDS)

ATGGGACTTCAAGTAGCATGCAATATGAGTATTAAAAAGTTGAAAGTTTTGGGTGACTCGATGTTAGTGATACATCAAGTCAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACAGCCAATACGTTACAAAATTGTCTCAAAATTTTGAGAAGATTTCATTTGACCATGTTCCTAGGGAAGACAATCGAATGGCGGATGCATTAGCCACTCTAGCACGAGATGTGCCAGCATATTGCATGAATGTTGGAAATGATAACAAGCCATGGTATTTTGACATTAAGCAATGCATAAAGTGTAGAGAATATCCATATGAAGCTTCAGAGAATGACAAACGCACAATAAGGAGGTTGGCCATGAACTTTTTCTTAAGTGGTGAAGTTCTTTATAAAAGAAACCACGATATGGTGCTCCTTCGGTGTGTTGATGAAGAGGAACCAAAACAAATTATGATAGACATTCATGAAGGAATATGTGGAACAAATGCTAATGGACATATGATGGCTAGACAAATACTTAGATCTGGTTATTATTGGACAACGATGGAATCAGACTGCATAAAATATGCAAGGGAATGTAAAAAGTGTCAAATTTATATGGATAAGATCCATGTAGCAGCATCTCCATTGCATATCTTGTCAGCACCATGA

Protein sequence

MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVPREDNRMADALATLARDVPAYCMNVGNDNKPWYFDIKQCIKCREYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICGTNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP

Homology

[Close]

BLAST of Pay0010157 vs. ExPASy Swiss-Prot
Match: Q8K259 (Gypsy retrotransposon integrase-like protein 1 OS=Mus musculus OX=10090 GN=Gin1 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-05
Identity = 31/107 (28.97%), Postives = 53/107 (49.53%), Query Frame = 0


Query: 104 EYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLR--CVDEEEPKQIMIDIHEGIC 163
           EY      +++  IRR A  F    + L+    D    R   V EEE K+++ + HE   
Sbjct: 23  EYHPTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVVVSEEEKKKVLRECHENGP 82

Query: 164 GTNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVA 209
           G + +G      ++ SGYYWT++ +D  ++   C+ CQ+  + + VA
Sbjct: 83  GVH-HGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQVAKNTVIVA 128

[Close]

BLAST of Pay0010157 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.2e-04
Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 0


Query: 2   GLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVP 61
           GL  A  +   +  VL DS LV+ Q+   W+ +   L+        L+  F +I+++ VP
Sbjct: 56  GLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVP 115

Query: 62  REDNRMADALATLARDVPA 81
           R  N  AD LA  A D  A
Sbjct: 116 RARNTYADRLANDAMDAAA 134

[Close]

BLAST of Pay0010157 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.2e-04
Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 0


Query: 2   GLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVP 61
           GL  A  +   +  VL DS LV+ Q+   W+ +   L+        L+  F +I+++ VP
Sbjct: 56  GLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVP 115

Query: 62  REDNRMADALATLARDVPA 81
           R  N  AD LA  A D  A
Sbjct: 116 RARNTYADRLANDAMDAAA 134

[Close]

BLAST of Pay0010157 vs. ExPASy Swiss-Prot
Match: P64956 (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.2e-04
Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 0


Query: 2   GLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHVP 61
           GL  A  +   +  VL DS LV+ Q+   W+ +   L+        L+  F +I+++ VP
Sbjct: 56  GLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVP 115

Query: 62  REDNRMADALATLARDVPA 81
           R  N  AD LA  A D  A
Sbjct: 116 RARNTYADRLANDAMDAAA 134

[Close]

BLAST of Pay0010157 vs. ExPASy TrEMBL
Match: A0A5A7T1X2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00190 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116
Identity = 210/236 (88.98%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           MGLQVAC+MSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQ FEKISFDHV
Sbjct: 48  MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHV 107

Query: 61  PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
           PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 108 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 167

Query: 121 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
           REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEE KQIM DI+EGICG
Sbjct: 168 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICG 227

Query: 181 TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
           T+ANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAAS LHILSAP
Sbjct: 228 THANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAP 283

[Close]

BLAST of Pay0010157 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.2e-116
Identity = 210/236 (88.98%), Postives = 212/236 (89.83%), Query Frame = 0


Query: 1    MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
            MGLQVAC+MSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 1415 MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHV 1474

Query: 61   PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
            PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 1475 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 1534

Query: 121  REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
            REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEE KQIMIDIHEGIC 
Sbjct: 1535 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMIDIHEGICE 1594

Query: 181  TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
            T+ANGHMMARQILRS YYWTTMESDCIKY RECKKCQIYMDKIHVAASPLHILSAP
Sbjct: 1595 THANGHMMARQILRSDYYWTTMESDCIKYVRECKKCQIYMDKIHVAASPLHILSAP 1650

[Close]

BLAST of Pay0010157 vs. ExPASy TrEMBL
Match: A0A5A7T0A1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.2e-116
Identity = 210/236 (88.98%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           MGLQVA +MSIKKLKVLGDSMLVIHQVKEEWE RDAKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 361 MGLQVAWDMSIKKLKVLGDSMLVIHQVKEEWEIRDAKLVPYSQYVTKLSQNFEKISFDHV 420

Query: 61  PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
           PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 421 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 480

Query: 121 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
           REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEE KQIM DI+EGICG
Sbjct: 481 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICG 540

Query: 181 TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
           T+ANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP
Sbjct: 541 THANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 596

[Close]

BLAST of Pay0010157 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.4e-116
Identity = 208/235 (88.51%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           MGLQVAC+MSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 446 MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 505

Query: 61  PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
           PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 506 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 565

Query: 121 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
           REYPYEASENDKR IRRL MNFFLSGEVLYKRNHDMVLLRCVDEEE KQIM DIHEGICG
Sbjct: 566 REYPYEASENDKRAIRRLTMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIHEGICG 625

Query: 181 TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSA 218
           T+ANGHMMARQILRSGYYWTTMESDCIKYAR+CKKCQIYMDKIHVAASPLHI SA
Sbjct: 626 THANGHMMARQILRSGYYWTTMESDCIKYARKCKKCQIYMDKIHVAASPLHIFSA 680

[Close]

BLAST of Pay0010157 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.4e-116
Identity = 208/236 (88.14%), Postives = 212/236 (89.83%), Query Frame = 0


Query: 1    MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
            MGL+VAC+MSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 1287 MGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHV 1346

Query: 61   PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
            PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 1347 PREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 1406

Query: 121  REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
            REYPYEA ENDKRTIR+LAMNFFLSGEV YKRNHDMVLLRCVDEEE KQIM DIHEGICG
Sbjct: 1407 REYPYEALENDKRTIRKLAMNFFLSGEVFYKRNHDMVLLRCVDEEEAKQIMTDIHEGICG 1466

Query: 181  TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
            T+ANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP
Sbjct: 1467 THANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 1522

[Close]

BLAST of Pay0010157 vs. NCBI nr
Match: KAA0036943.1 (uncharacterized protein E6C27_scaffold86G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 427.6 bits (1098), Expect = 6.6e-116
Identity = 210/236 (88.98%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           MGLQVAC+MSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQ FEKISFDHV
Sbjct: 48  MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQKFEKISFDHV 107

Query: 61  PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
           PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 108 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 167

Query: 121 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
           REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEE KQIM DI+EGICG
Sbjct: 168 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICG 227

Query: 181 TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
           T+ANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAAS LHILSAP
Sbjct: 228 THANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASSLHILSAP 283

[Close]

BLAST of Pay0010157 vs. NCBI nr
Match: KAA0037621.1 (uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa])

HSP 1 Score: 427.2 bits (1097), Expect = 8.7e-116
Identity = 210/236 (88.98%), Postives = 212/236 (89.83%), Query Frame = 0


Query: 1    MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
            MGLQVAC+MSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 1415 MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHV 1474

Query: 61   PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
            PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 1475 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 1534

Query: 121  REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
            REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEE KQIMIDIHEGIC 
Sbjct: 1535 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMIDIHEGICE 1594

Query: 181  TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
            T+ANGHMMARQILRS YYWTTMESDCIKY RECKKCQIYMDKIHVAASPLHILSAP
Sbjct: 1595 THANGHMMARQILRSDYYWTTMESDCIKYVRECKKCQIYMDKIHVAASPLHILSAP 1650

[Close]

BLAST of Pay0010157 vs. NCBI nr
Match: KAA0036934.1 (uncharacterized protein E6C27_scaffold86G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115
Identity = 210/236 (88.98%), Postives = 213/236 (90.25%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           MGLQVA +MSIKKLKVLGDSMLVIHQVKEEWE RDAKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 361 MGLQVAWDMSIKKLKVLGDSMLVIHQVKEEWEIRDAKLVPYSQYVTKLSQNFEKISFDHV 420

Query: 61  PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
           PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 421 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 480

Query: 121 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
           REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEE KQIM DI+EGICG
Sbjct: 481 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIYEGICG 540

Query: 181 TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
           T+ANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP
Sbjct: 541 THANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 596

[Close]

BLAST of Pay0010157 vs. NCBI nr
Match: KAA0046213.1 (uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 208/236 (88.14%), Postives = 212/236 (89.83%), Query Frame = 0


Query: 1    MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
            MGL+VAC+MSIKKLKVLGDSMLVIHQVKEEWETR AKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 1287 MGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLSQNFEKISFDHV 1346

Query: 61   PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
            PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 1347 PREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 1406

Query: 121  REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
            REYPYEA ENDKRTIR+LAMNFFLSGEV YKRNHDMVLLRCVDEEE KQIM DIHEGICG
Sbjct: 1407 REYPYEALENDKRTIRKLAMNFFLSGEVFYKRNHDMVLLRCVDEEEAKQIMTDIHEGICG 1466

Query: 181  TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 219
            T+ANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP
Sbjct: 1467 THANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSAP 1522

[Close]

BLAST of Pay0010157 vs. NCBI nr
Match: TYK24459.1 (uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 208/235 (88.51%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           MGLQVAC+MSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV
Sbjct: 446 MGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 505

Query: 61  PREDNRMADALATLA------------------RDVPAYCMNVGNDNKPWYFDIKQCIKC 120
           PREDNRMADALATLA                  RDVPAYCMNVGNDNKPWYFDIKQ IKC
Sbjct: 506 PREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKPWYFDIKQYIKC 565

Query: 121 REYPYEASENDKRTIRRLAMNFFLSGEVLYKRNHDMVLLRCVDEEEPKQIMIDIHEGICG 180
           REYPYEASENDKR IRRL MNFFLSGEVLYKRNHDMVLLRCVDEEE KQIM DIHEGICG
Sbjct: 566 REYPYEASENDKRAIRRLTMNFFLSGEVLYKRNHDMVLLRCVDEEEAKQIMTDIHEGICG 625

Query: 181 TNANGHMMARQILRSGYYWTTMESDCIKYARECKKCQIYMDKIHVAASPLHILSA 218
           T+ANGHMMARQILRSGYYWTTMESDCIKYAR+CKKCQIYMDKIHVAASPLHI SA
Sbjct: 626 THANGHMMARQILRSGYYWTTMESDCIKYARKCKKCQIYMDKIHVAASPLHIFSA 680

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BLAST of Pay0010157 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.1e-07
Identity = 27/75 (36.00%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           +GL+ A +   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+
Sbjct: 206 LGLRSALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHI 265

Query: 61  PREDNRMADALATLA 76
            RE N  AD  A  A
Sbjct: 266 AREKNSEADKQANSA 280

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BLAST of Pay0010157 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.1e-07
Identity = 27/75 (36.00%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           +GL+ A +   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+
Sbjct: 206 LGLRSALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHI 265

Query: 61  PREDNRMADALATLA 76
            RE N  AD  A  A
Sbjct: 266 AREKNSEADKQANSA 280

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BLAST of Pay0010157 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.3e-04
Identity = 26/79 (32.91%), Postives = 34/79 (43.04%), Query Frame = 0


Query: 1   MGLQVACNMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLSQNFEKISFDHV 60
           +GL+ A     K +KV GDS LV  Q+K +W+     L    +    L          HV
Sbjct: 268 LGLKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHV 327

Query: 61  PREDNRMADALATLARDVP 80
            R  N  AD  A LA  +P
Sbjct: 328 LRNLNADADEQANLAVRLP 346

The following BLAST results are available for this feature:

BLAST of Pay0010157 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8K259	1.0e-05	28.97	Gypsy retrotransposon integrase-like protein 1 OS=Mus musculus OX=10090 GN=Gin1 ...	[more]
P9WLH5	4.2e-04	32.91	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	4.2e-04	32.91	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
P64956	4.2e-04	32.91	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]

BLAST of Pay0010157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1X2	3.2e-116	88.98	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00190 ...	[more]
A0A5A7T7R4	4.2e-116	88.98	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282...	[more]
A0A5A7T0A1	7.2e-116	88.98	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 ...	[more]
A0A5D3DMD2	9.4e-116	88.51	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160...	[more]
A0A5A7TRL7	9.4e-116	88.14	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010...	[more]

BLAST of Pay0010157 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036943.1	6.6e-116	88.98	uncharacterized protein E6C27_scaffold86G00190 [Cucumis melo var. makuwa]	[more]
KAA0037621.1	8.7e-116	88.98	uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]	[more]
KAA0036934.1	1.5e-115	88.98	uncharacterized protein E6C27_scaffold86G00070 [Cucumis melo var. makuwa]	[more]
KAA0046213.1	1.9e-115	88.14	uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]	[more]
TYK24459.1	1.9e-115	88.51	uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0010157 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01410.1	7.1e-07	36.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	7.1e-07	36.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	4.3e-04	32.91	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 109..201 e-value: 2.0E-13 score: 52.4
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 1..214
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..214
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..82 e-value: 2.1E-19 score: 71.7
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 1..75 e-value: 6.4E-16 score: 58.3
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 145..201 e-value: 1.4E-6 score: 28.3
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0010157.1	Pay0010157.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding