Pay0009970 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009970
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Histone H2B
Location	chr08: 6609835 .. 6610652 (-)
RNA-Seq Expression	Pay0009970
Synteny	Pay0009970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCCTAAAACGAAAATCCCTCTTCTCGAATTCAAATCTGTAGACTTGTTCAATTGAAATGGCTCCAAAGGCAGAGAAAAAGCCCGCCGAGAAGAAACCAGCGGAGAAGGCTCCAGCTGGTGAGAAGAAGCCTCGAGCAGAGAAAAAGATTCCGAAAGATGCTTCGTCGTCAGATAAGAAGAAGAAGAGGATGAAGAAGAGCGTTGAGACCTACAAGATTTACATCTTCAAGGTCTTGAAGCAGGTCCATCCCGATATCGGAATCTCTAGCAAGGCCATGGGGATTATGAACAGTTTTATTAATGATATTTTTGAGAAGCTTGCTCAGGAATCGTCGCGATTGGCTAGGTATAACAAGAAGCCGACTATCACCTCTAGGGAAATCCAAACGGCTGTTCGACTTGTGCTTCCTGGTGAACTTGCGAAGCATGCTGTGTCCGAAGGGACGAAAGCGGTTACCAAATTCACCAGTTCTTAGAAATTTCGATCGTATCTGTTAGTGTTTAGAAATTAGCTTCGATATTGTTTGATGATATAGATTGCGATTGTTTTTGTCCGGCTTAGTATGAAACGGAAATTCTTCGTTTGAAGTTGATGCAATATTTTCGTATAATTGTAGATCAGTGATCAAAAAGTGTTCAAAATTTGACCTTCGCTCCTACTTTTTCTGTATTCAAATTTAATAGAATACTCTGGAAGTAAGTTCTTGCTCGAAATTTTACACCGGCTTTATTTTTCAGTAATGTAAAGTATATTCGAATTATCTTCGAAAATTGCTGTAGAACGCTATTCCATCCAACATGTTTTTAATTAAAA

mRNA sequence

ATCTTCCTAAAACGAAAATCCCTCTTCTCGAATTCAAATCTGTAGACTTGTTCAATTGAAATGGCTCCAAAGGCAGAGAAAAAGCCCGCCGAGAAGAAACCAGCGGAGAAGGCTCCAGCTGGTGAGAAGAAGCCTCGAGCAGAGAAAAAGATTCCGAAAGATGCTTCGTCGTCAGATAAGAAGAAGAAGAGGATGAAGAAGAGCGTTGAGACCTACAAGATTTACATCTTCAAGGTCTTGAAGCAGGTCCATCCCGATATCGGAATCTCTAGCAAGGCCATGGGGATTATGAACAGTTTTATTAATGATATTTTTGAGAAGCTTGCTCAGGAATCGTCGCGATTGGCTAGGTATAACAAGAAGCCGACTATCACCTCTAGGGAAATCCAAACGGCTGTTCGACTTGTGCTTCCTGGTGAACTTGCGAAGCATGCTGTGTCCGAAGGGACGAAAGCGGTTACCAAATTCACCAGTTCTTAGAAATTTCGATCGTATCTGTTAGTGTTTAGAAATTAGCTTCGATATTGTTTGATGATATAGATTGCGATTGTTTTTGTCCGGCTTAGTATGAAACGGAAATTCTTCGTTTGAAGTTGATGCAATATTTTCGTATAATTGTAGATCAGTGATCAAAAAGTGTTCAAAATTTGACCTTCGCTCCTACTTTTTCTGTATTCAAATTTAATAGAATACTCTGGAAGTAAGTTCTTGCTCGAAATTTTACACCGGCTTTATTTTTCAGTAATGTAAAGTATATTCGAATTATCTTCGAAAATTGCTGTAGAACGCTATTCCATCCAACATGTTTTTAATTAAAA

Coding sequence (CDS)

ATGGCTCCAAAGGCAGAGAAAAAGCCCGCCGAGAAGAAACCAGCGGAGAAGGCTCCAGCTGGTGAGAAGAAGCCTCGAGCAGAGAAAAAGATTCCGAAAGATGCTTCGTCGTCAGATAAGAAGAAGAAGAGGATGAAGAAGAGCGTTGAGACCTACAAGATTTACATCTTCAAGGTCTTGAAGCAGGTCCATCCCGATATCGGAATCTCTAGCAAGGCCATGGGGATTATGAACAGTTTTATTAATGATATTTTTGAGAAGCTTGCTCAGGAATCGTCGCGATTGGCTAGGTATAACAAGAAGCCGACTATCACCTCTAGGGAAATCCAAACGGCTGTTCGACTTGTGCTTCCTGGTGAACTTGCGAAGCATGCTGTGTCCGAAGGGACGAAAGCGGTTACCAAATTCACCAGTTCTTAG

Protein sequence

MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Homology

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BLAST of Pay0009970 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 221.5 bits (563), Expect = 6.0e-57
Identity = 128/136 (94.12%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 4   KAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVLKQV 63
           KAEKKPAEKKPAEKAPA EKKP+AEKKI K+  SSDKKKKR KKSVETYKIYIFKVLKQV
Sbjct: 5   KAEKKPAEKKPAEKAPA-EKKPKAEKKISKE-GSSDKKKKRTKKSVETYKIYIFKVLKQV 64

Query: 64  HPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAK 123
           HPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAK
Sbjct: 65  HPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAK 124

Query: 124 HAVSEGTKAVTKFTSS 140
           HAVSEGTKAVTKFTSS
Sbjct: 125 HAVSEGTKAVTKFTSS 138

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BLAST of Pay0009970 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 218.4 bits (555), Expect = 5.1e-56
Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP-------AEKAPAGEKKPRAEKKIPKD--ASSSDKKKKRMKKSVET 60
           MAPKAEKKPAEKKP       AEKAPA EKKP+A KK+PK+  A++ DKKKKR+KKSVET
Sbjct: 1   MAPKAEKKPAEKKPAEEKKAVAEKAPA-EKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of Pay0009970 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-55
Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKV 60
           MAPK AEKKPAEKKPA KAPA EK P+AEKKI KDA  S+KKKK+ KKSVETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAEKKPAGKAPA-EKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTS 139
           ELAKHAVSEGTKAVTKFTS
Sbjct: 121 ELAKHAVSEGTKAVTKFTS 138

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BLAST of Pay0009970 vs. ExPASy Swiss-Prot
Match: O65819 (Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.5e-55
Identity = 124/136 (91.18%), Postives = 130/136 (95.59%), Query Frame = 0


Query: 5   AEKKPAEKKP-AEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVLKQV 64
           AEKKPAEK P AEKAPA EKKP+A KK+PKDA++ DKKKKR KK+VETYKIYIFKVLKQV
Sbjct: 3   AEKKPAEKTPVAEKAPA-EKKPKAGKKLPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQV 62

Query: 65  HPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAK 124
           HPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAK
Sbjct: 63  HPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAK 122

Query: 125 HAVSEGTKAVTKFTSS 140
           HAVSEGTKAVTKFTSS
Sbjct: 123 HAVSEGTKAVTKFTSS 137

[Close]

BLAST of Pay0009970 vs. ExPASy Swiss-Prot
Match: Q1S9I9 (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 214.9 bits (546), Expect = 5.7e-55
Identity = 128/149 (85.91%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP--------AEKAPAGEKKPRAEKKIPKDASSS--DKKKKRMKKSVE 60
           MAPK EKKPAEKKP        AEKAPA EKKP+A KK+PK+  S+  +KKKKR KKSVE
Sbjct: 1   MAPKGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGEKKKKRSKKSVE 60

Query: 61  TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 120
           TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ
Sbjct: 61  TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 120

Query: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

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BLAST of Pay0009970 vs. ExPASy TrEMBL
Match: A0A5A7SJ40 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00680 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.9e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60
           MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL
Sbjct: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. ExPASy TrEMBL
Match: A0A1S3CH60 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500845 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.9e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60
           MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL
Sbjct: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. ExPASy TrEMBL
Match: A0A0A0KHB8 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G448180 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.5e-61
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60
           MAP+AEKKPAEKKPAEKAPAGEKKPRAEKKI KDASSSDKKKKR KKSVETYKIYIFKVL
Sbjct: 1   MAPRAEKKPAEKKPAEKAPAGEKKPRAEKKISKDASSSDKKKKRTKKSVETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. ExPASy TrEMBL
Match: A0A6S7PJY9 (Histone H2B OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS40634 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.3e-58
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKV 60
           MAPKAEKKPAEKKP AEKAPA EKKPRAEKK+PKDASS+DKKKKR KKSVETYKIYIFKV
Sbjct: 1   MAPKAEKKPAEKKPAAEKAPA-EKKPRAEKKLPKDASSTDKKKKRNKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. ExPASy TrEMBL
Match: A0A2J6LYU1 (Histone H2B OS=Lactuca sativa OX=4236 GN=LSAT_0X10941 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.3e-58
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKV 60
           MAPKAEKKPAEKKP AEKAPA EKKPRAEKK+PKDASS+DKKKKR KKSVETYKIYIFKV
Sbjct: 1   MAPKAEKKPAEKKPAAEKAPA-EKKPRAEKKLPKDASSTDKKKKRNKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. NCBI nr
Match: XP_008462509.1 (PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0025319.1 putative histone H2B.3 [Cucumis melo var. makuwa] >TYK07350.1 putative histone H2B.3 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60
           MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL
Sbjct: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. NCBI nr
Match: XP_004143285.1 (probable histone H2B.3 [Cucumis sativus] >KGN48209.1 hypothetical protein Csa_002726 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60
           MAP+AEKKPAEKKPAEKAPAGEKKPRAEKKI KDASSSDKKKKR KKSVETYKIYIFKVL
Sbjct: 1   MAPRAEKKPAEKKPAEKAPAGEKKPRAEKKISKDASSSDKKKKRTKKSVETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. NCBI nr
Match: XP_038882933.1 (probable histone H2B.3 [Benincasa hispida])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKVL 60
           MAPKAEKK AEKKPAEKAPAGEKKPRAEKK+PKDA SS+KKKK+MKKSVETYKIYIFKVL
Sbjct: 1   MAPKAEKKLAEKKPAEKAPAGEKKPRAEKKLPKDA-SSEKKKKKMKKSVETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Pay0009970 vs. NCBI nr
Match: XP_023754570.1 (histone H2B.3 [Lactuca sativa] >PLY92478.1 hypothetical protein LSAT_0X10941 [Lactuca sativa] >CAB4114035.1 unnamed protein product [Lactuca saligna])

HSP 1 Score: 233.8 bits (595), Expect = 9.0e-58
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP-AEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKV 60
           MAPKAEKKPAEKKP AEKAPA EKKPRAEKK+PKDASS+DKKKKR KKSVETYKIYIFKV
Sbjct: 1   MAPKAEKKPAEKKPAAEKAPA-EKKPRAEKKLPKDASSTDKKKKRNKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 139

[Close]

BLAST of Pay0009970 vs. NCBI nr
Match: XP_042475367.1 (histone H2B.3-like [Macadamia integrifolia])

HSP 1 Score: 233.8 bits (595), Expect = 9.0e-58
Identity = 133/148 (89.86%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP---------AEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVET 60
           MAPKAEKKPAEKKP         AEKAP GEKKP+AEKK+PK+A+SSDKKKKR KKSVET
Sbjct: 1   MAPKAEKKPAEKKPASTAAEEKKAEKAPVGEKKPKAEKKLPKEAASSDKKKKRSKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Pay0009970 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-56
Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MAPK-AEKKPAEKKPAEKAPAGEKKPRAEKKIPKDASSSDKKKKRMKKSVETYKIYIFKV 60
           MAPK AEKKPAEKKPA KAPA EK P+AEKKI KDA  S+KKKK+ KKSVETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAEKKPAGKAPA-EKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTS 139
           ELAKHAVSEGTKAVTKFTS
Sbjct: 121 ELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Pay0009970 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 9.0e-56
Identity = 125/151 (82.78%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKPAEKAPA----------GEKKPRAEKKIPKDASSS--DKKKKRMKKS 60
           MAPKA KKPAEKKPAEKAPA           EKKP+A KK+PK+A +   +KKKKR+KKS
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSRE
Sbjct: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]

BLAST of Pay0009970 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 9.0e-56
Identity = 127/146 (86.99%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP------AEKAPAGEKKPRAEKKIPKDA-SSSDKKKKRMKKSVETYK 60
           MAPKAEKKPAEKKP      AEKAPA EKKP+A KK+PK+A +  DKKKK  KKSVETYK
Sbjct: 1   MAPKAEKKPAEKKPVEEKSKAEKAPA-EKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYK 60

Query: 61  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAV 120
           IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAV
Sbjct: 61  IYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAV 120

Query: 121 RLVLPGELAKHAVSEGTKAVTKFTSS 140
           RLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 RLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Pay0009970 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-55
Identity = 127/151 (84.11%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP-----------AEKAPAGEKKPRAEKKIPKDA-SSSDKKKKRMKKS 60
           MAPKAEKKPAEKKP           AEKAPA EKKP+A KK+PK+A +  DKKKK  KKS
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEEKSKAEKAPA-EKKPKAGKKLPKEAGAGGDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Pay0009970 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 7.6e-55
Identity = 126/151 (83.44%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MAPKAEKKPAEKKP-----------AEKAPAGEKKPRAEKKIPKDA-SSSDKKKKRMKKS 60
           MAP+AEKKPAEKKP           AEKAPA EKKP+A KK+PK+A +  DKKKK  KKS
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPA-EKKPKAGKKLPKEAGAGGDKKKKMKKKS 60

Query: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 120
           VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

The following BLAST results are available for this feature:

BLAST of Pay0009970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1SU99	6.0e-57	94.12	Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]
O22582	5.1e-56	87.16	Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3	[more]
Q9ZUS0	1.9e-55	89.93	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
O65819	2.5e-55	91.18	Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1	[more]
Q1S9I9	5.7e-55	85.91	Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3	[more]

BLAST of Pay0009970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SJ40	5.9e-63	100.00	Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00680 PE...	[more]
A0A1S3CH60	5.9e-63	100.00	Histone H2B OS=Cucumis melo OX=3656 GN=LOC103500845 PE=3 SV=1	[more]
A0A0A0KHB8	5.5e-61	97.84	Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G448180 PE=3 SV=1	[more]
A0A6S7PJY9	4.3e-58	96.43	Histone H2B OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS40634 PE=3 SV=1	[more]
A0A2J6LYU1	4.3e-58	96.43	Histone H2B OS=Lactuca sativa OX=4236 GN=LSAT_0X10941 PE=3 SV=1	[more]

BLAST of Pay0009970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462509.1	1.2e-62	100.00	PREDICTED: probable histone H2B.3 [Cucumis melo] >KAA0025319.1 putative histone ...	[more]
XP_004143285.1	1.1e-60	97.84	probable histone H2B.3 [Cucumis sativus] >KGN48209.1 hypothetical protein Csa_00...	[more]
XP_038882933.1	1.1e-58	96.40	probable histone H2B.3 [Benincasa hispida]	[more]
XP_023754570.1	9.0e-58	96.43	histone H2B.3 [Lactuca sativa] >PLY92478.1 hypothetical protein LSAT_0X10941 [La...	[more]
XP_042475367.1	9.0e-58	89.86	histone H2B.3-like [Macadamia integrifolia]	[more]

BLAST of Pay0009970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37470.1	1.4e-56	89.93	Histone superfamily protein	[more]
AT2G28720.1	9.0e-56	82.78	Histone superfamily protein	[more]
AT3G46030.1	9.0e-56	86.99	Histone superfamily protein	[more]
AT5G59910.1	2.0e-55	84.11	Histone superfamily protein	[more]
AT3G45980.1	7.6e-55	83.44	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 123..136 score: 92.65 coord: 93..110 score: 79.1 coord: 71..91 score: 75.74 coord: 110..123 score: 92.45 coord: 52..70 score: 80.55
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 42..138 e-value: 5.6E-73 score: 258.4
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 5..139
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 107..129
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..139 e-value: 5.8E-59 score: 199.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 27..139
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 5..115 e-value: 9.4E-23 score: 81.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR23428:SF279	HISTONE H2B	coord: 5..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009970.1	Pay0009970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity