Pay0009939 (gene) Melon (Payzawat) v1

Overview
NamePay0009939
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Locationchr11: 7370084 .. 7377682 (-)
RNA-Seq ExpressionPay0009939
SyntenyPay0009939
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCAAAAAAAAAAAGGTCACATCCGTGGTTTTTACTTTAAGCTCCCCGGGCCGTAGCTCTTCGCGCTCTCTCTTTCTCTCTCAGCTCAGGTTGTGCGTTTGATCGGTGGATCAATGGCGTCAAGTCTGTTCAAATTGCTTCTTGAATCTTCTTCTAATATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGTATCCACTAATTTCTCGCTAATCCCCCCTTTCGAAATCTACTTCTTCTACGCCCGTGTTTGAGTTGATTTCTGTTGGTTCTGTATTCTCGTTTACAGTTCGTTATTCTTTCTAACGTTACCTAATAACCGATTTAGAGCTTGGGCCTGAAGGCTCCTTTAATGTTGTTTTCGTAAATCGATTGTCTTTATGTGGAAATTAATTCGTGTTATTTTAAGAGAAGAGAAGAGAAGACAAGAGAAAGAATCTTTTTTTCCAGTGGCATTGATGGATGCTAAACCTTTTGGTGGTCGTTTATCGAAGTAAATTTATCTATATTATACAAATATTTTATTTCATTAGCTTTCGTGCCCCCCATCCCTACTTAGACCATGTCTTATCTTCTTCATGTTTTGTGGATTTTATGTGTACATGAAAATTATCAGAGAATATGCCTTTCAACCTTTAGAAATATTAACTTTTTCATTGATATTTGAGAAGTTACGAACGATTGACTTCCTAAAGAATGCATAAAAGTAGAAAAGAGAAACTCCTTCAGGTTGTATTCATGCTGCTTGCAGCCTAAGAAAACAAAAAAGAGAAGAGCTGTCATGAATGACTAGGTAGGGAACCCCTTAACAAATGGAAGGTCCTGTGGCTGTTGATGTTGATGGCTTTCATATCTTCTCAATTTTTTTTGAACAAGATACTAGAGGCAATGAGTAGGTGCATTAGAATATCTCAACTAGATCGACACCTCCATAACATCCTCATCATCTCCCACATATCTTCTCAATTATTATTATTACTATTTGTAAGAAAACAATTTTTATTAAGATACAGGCCATGAAGAGACAATCCGAGGCAAAAAGGAATTATGACTACCAAAAGAGGTTCTAATTATCAAGAACCAAAAATAAAGGAAATTTACAAAGTACATACTAATAGTAATGGTACTGGAAGACACTTAGATAGAGGTATTGAATAAGCCAATCCTCACATCCCCTCCGAAGAATCCTTGACCTTTTAAGAATCCTCCACTTTCTTTCAAACCAAATGTACCCAAAGCTATAAGCTGCTTGCCTCATAATTTCCCCTTTACCATCAATGCATTTGCATCCTCCATTTTTGAACAATAATCCTTTTGTTGAACCAAGCGAACACCAAATTTTGAGATCTATTCCCCCACCCCACACGCACGAGATAAGAAGCAAATTTTATTGATGTGAAATTTACAAAAGAAGCATGATGGCCAAATCAAAAATGATTTCTCCAATTGGTCAAATATATCTCACATGTTTATTGCCATGTGACATATTTATAGAGATCTTGCCCTGAATTATTTCCAGAGAGATTGCTTTTGACTTTCGAGGTGTGTTTTGTGTGGGTATGGCCATATGGGAAAAATACTGAAACTATGTTTCAGGGTATGTTTTCTTTCTTAATGAGTATGCAGTTGTTCTTGGAATTCTTTTGGATTATTTGCTATTTGAGGTCGAGCATTCATGACACAATCAATGAAGTTGTTCAGGTTGAAAATGGGGTTCTTTGCATTAGTTTATTTGGCTAGAAAGGGACAACATAGGAATGTTTGTGCAATTAAATGAATGGAGTGTTGATATTTTGGGTTTGATGTAAGCTATTTTTTGGTCTCTTAACTCAAATTGAAGAACTGGTTCATTATTATATCCCTTTTCTATATTTTCTCTTTTTTCTTTTTCTTTCTTTCTCTCTGTTCTTTTTTCTTTTTTTTTTGGTTGCCTAAAGTTGGAGGTCTTTGTTGTGAATTCTATTTAGCTTCCACTTTTTGTTTGGCCTTGGCAGTGAGCGTATGTTTTCTTTTGTTTCTCTCAATAACAATTGAATTTTCTAGTTCAATTCCATGACTGTAGGCGGCCATATAACTAGAGCAAATTGAAGTATTAGGAATTTCATGCACTGGTGAATGAAGTTAACTTATTGGATTAGACGTTAAGATGGTACTTTTTCATTTGGGTTGTTGAAAATTGCCATGAGCCTCCTTCCCTAGTTTTGGTAAAGTTGTATTTGAAGCTCTTGCCTATTATTAACCTGGGTTTCTGATTAATTGCCCTTTCTCTATGTTAATGTGCTTACAGCTGCACTATCTTGTTTGTACAGAGTGATAGTGGTTATTTTGGGTGCCTTGTCAATTTTGTGAGTCACACCTCAGTTACTATATTTTTCAAGATATCAAGTATGCATTGCACCACTTTAAGCCCTTGTTTAAGGAATAGTCCGTTTGGGCACCTCCAGTGCATTTAAATTTCTTGTTCATGCATACGAGAAGACTATGCCAAGTAAATATTTGACTGATCCATTTGCTACTTGATGGTAGCAATATCCTGTTGAGCATGACTTCAATTCAAGGAAGTTGCACAGTACCCCTTTTACTGGTCTTGAAGAACATGTAGTGTAGATTGAACTCCACATTTACAATATTAAGATCGTTTCCTAGCATGTCAACAATATTCTTAAATACACGGTTGATCTGTTTGAGATAATCTTTGGGAAGGTTTTTGTTAGACCTCCAATAATGTTACAATACAGTAGGAGAGGGAAGAGAGAGAAAGCACACGTAATTGGGAGTGTTAGCGCTAGTGCTGGGGCCCACAGGTAGTTAGGAGGGAAGGGGGAGGTTCAAATAGAAGGGAGAGCATCTGTGAGGGGGGGAAATGATTTTCAGAGTGGGCTGTTGCATCCTTGAGAGAAAGGATAAACAGAGAGAGAAACTTTGTTCTTCTTGTTGATGTAATTTCCATTCCGAATTGATACTTCATCAATTCGTTACTGTATTGCTTTCAAACTACCAATTGGTTAAAGAACAGTCCTATCAGTGTTCTATCAGTTTTCTTGCAGTGGCAGTATGGATAATGTAAATTGGGAGACTATTCAACACTTTCTAAATTGATGGGTGGTCTTGACATTAGTAACTTTCGGCATTGTGATTATGTATTATTGGCTACATGAATATGGATATTTTGCCCAAAAGAGAGTGCTTTATGGTGGAAGCTTGTTGATGCTAAGTAGTATGCATCTATGATGAGACGAGTTTACCAAGATCTATTCGATTAGATTCTTTTAATCCCCCTGGAGATTTATTTGTAAGATTATTGACCTGGTTGCTAGTGTGCTTGGGATTGTCTTGGTAATGGGATCTCTACTTTTTGGAAGACCTCTTAGCTTAGTCGTGGTTCTATCATGATTGTTGTCCGTCGACTATTTTGCCTTGCTCTTTATCTTGATGCTACAGTGGCTGATGTGTGGGCTTCGGAAACTGGTGCTTGGGTTTACGTTTTTTCTGTAATCTTAATGATTTGTAAATGATTGAATGGGCTAATCTTTCTCATCTATTTGTCCTGTTGCACCTTTATGCTCTATTCAATCACTTATAGCTTATAGTTTATCTTACTTGATTTCAAATTGGAGAACTTGTAATTCACCTATAGCTGTTTGGGATTTTACTCTATTTTATTCATCAATGAAATTATTTGTTCATCCAAAAATGAAAGGTTCTCAACTATAGAATGCATGTTTGACATGAACCCTTGTCCCTTGTGAATCTCTAGGAAATCATGAGCGAGACCCTAGGGTTTCTGTTGAATGTTCTTTCCAACCCAACATTTCATTGCCTTGCAGTGGGAATGTCACAGTTTGAAGAATTTGTGCTTCAAAGGAAACAATTATCTTTGATTTTTTTAACAGTCGTCTAATCTGTTGCACAGTTGCAGCATGTACCGTTCTCATGCACTTGAAGCTTAAATCAACCCTTCAAGTCGGAGAATGTCATTAGCAGAAACTTTATGTCACTCTAGTGATATGATGAATCCGATCAGCTTTTGGTTGAAATATGAGACTAGAGGACTCTTTGTTGCATAAGATTTTGCATCCATGTCCATTAACTAGGAAGGATTGAGTCAGTCTGACAATGGATATTTTTCCCTCTATCATTCCAATTTTGTCGGATGTCCCCAAAGGGACAACAATGGATATTTTTCCTATTTGTAGCACGTACAATTTCTAGATTTATTAAATTAATTTAGATAATTTGGACTTCCTTCAAATGCTCTAGAGTATATGAGAACTATCCACGGTTTCTTATTATTTTAAGTCTAGGATTCTTTCCACAGATCAATTCTTCATAGCCCTCACGCATTTTCACATTTTCAAGAAGTTTTGAGGGTCCCATTCGTGTTCTCACAATTGAAAGAATCGTGATTGCTTGGGAAGTCTTCAAGTAGGTTATTCATCAACATCTTCTGTGTTGCTTAACTATTCTACATGTATTAGCTCGTTGAGTTATCCCTATGCTCAAAGCTGGTAGTTAAATTTTTGTTTCCTCTTTAGTTACATACTCTGGATTGCAGGCTGTCAGCACGTTTTATAACTGCATCAATTTCAATGGCCTTGTTTATTATCTATCCCATGTGAGCTCTGTAATAAATGATTTGTTATTATGCTTTTGGGATTAAGCCAACATTCTTCCTTTAAGGAGATGCTCATTTTCTGCCTTAAGATTTTATCGACAGTTTATTATATAACACAAATCAAGCCCTCATACCAGATATCAACATTCTTCCTTTAAGAAGACGCTATTTTCAAGGAAAAGTGAACCAAGTGAAGGATCTTCTTTTAGATAATAAGAGGCATAGTTTTGGAATGTTATGGCTCTACGGCTGTAAGAAAATTTTGGATGCCTAGATGTAAATAAGAAGACAAACGGGTAGTAACAAATTTCTGTAATAATCCATACTCTTGTCTGCAAAGATTGCAATGGAAGAAGGTTTGGGCGTGGATGTTATCAATTAGAGATACAAAACACAAAAGGACCTCCTACTATATCTTAACATACAGATTAATCGAACAAGCTGAAACCCATGTCGTCATCGGACTCCTCAGCTGGCTCTTCCTTCTTCTCAACAGCTGCAGCAGCTTCTGTGGCAGACCCAGAATCAGCAGCAGACACGGCCACAGCAACAGCAAACTTGTTAGGATCCGCAAGATACTCTTTAACCTTCTCAGCCTGGGGGAAGGAATAGTCGGTAGCAACTGCAACAGCAAGAAGGTTTTTGTATGCATTGATGAGCATGTGTGGTGCAGCAACCAGAGTTGGGTATGAAATGGCCAACGAAAAAGATGTAACCGTGGAAACACCCAATGAAAACTTTTCAAGGAGATCATCCTCGGTCAGATCGAGCACCTGAGGGCTAAAGACTGATCCATTGTCATAAACAGAGAGGACAACAAGACCATATGAGAATGGCCTGATTCCTAGCTTGGCAAGGAGAGCAGCAGCTCTCCTCAGAAGATCCAACCTTATCACCCTTCTTAATGAGCTCCACAGGAGTGATAATTTCGACAGTATCCTTGTTAATCTTGGTTGGAATATTAAGAACCTGGAAGAAAGAGGTCTGAGATGGATCAAGCCCTGTGTTGCCTGGTAGAAAGATGACATCAATTGGAGCAAGCAAACCAACACGAGCAGGGGCTCCAACCTTGTATTTGGCCACCTCTTCACTGACTTCCTTCAAATCACCCTTGGTGAAGATCAAACCAACGTTGCCCACAAGAAAGGGAAGAAGGTTGAGGTAAGACTTGTTACCAGTCTGCTCAGAGTGGATCCTCACCAAGCGCTTCATCATGGTGTTTTTCCCCATGAGCACAATGGAATCACCACAGAGACCCTTCCTAATGTTCTGGAGCTGGTTGGATCCGACATTGTCAGCGGCCACAACCAAGACCTGGCTATAATCATCGAGAAGCTGACAGAACTTGGAGTCGTAGGCGACCTTCTTTTCAGCCTTGGTGGGTTTGATAGCCATTGAAATGGGTAAAATTCTAAGATACAACAAAAAAGGGGGTTAAAGAAAGAAAAAAAGCAAAACTGAGGGACAAGACGAAGCTGGATGCTCTGCCAAGGCAGACAGCAAAGCTATGCCATCTCTTTAACCTGTGTAATGCTAAGAAGCGTTTTTAAGGGTTTTGGACAACTCCTGGGGAGCTTAAAAGGCTGGTAGCAGTTGATGTTATCAATTAGAAGTCCTTAAATATAGTTTGTGATATCACAAACTTAATTTGTGGTTCACAACTAATTATTTTGGAACTGACGTAAACCAAATTCAATATTATAAACAATAAAATAATGATATTTTGTAACAAAGAACTGTTTTTTAGCCCAAATATTCTTTTTAGCTTGCCTGTCATCTCCCACATTTTCAAGTGATATCTCATGGCCTAATTTTGCTTATGGAAATTTTCTCTTGATCACTGTTCTGTATTGATAATTCATACATTGTTTGACATTTTGCAAGTTGAATTTTGTTTGGCATGACCTCAATATTTTGCTTTCCGCCATCTGTATCCTTAAATTATTGAGTGTCTATCAAGTTCTACTGACTGTTGCGACATGTTATAGTTCTTTCTCAATTTATTTCATTTACTTCTAATAAATATCCTTCCATTTGCTGGGCATCTGATATTACCCTTTGTGATCCTGTCCAATGCTGAAGGATATATGAAACTTTTTATCTTATTTCCATCTCTAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGAAGGCCGCATCGTTGCTTGTGAAGGAGGTTAGTACCTTAGTACGTCTCTATACTTGTATCAACGCATGCATATTTTTCAAGTAAATGATTTATTACAGAAGGTATGATTCCTTATTTGGATTCAAAATCTTGCTGAATGCAGACAGCAATCCTGCCCTTGGACATCCAATTGAGTTCATATGCCTCGATCGGGAAGAGCCCGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAAATGTGCAAATGATTATTCCAGCAAGCAACCCGGAACTTAAAGTCTATTGTACCTTTCTAAACTCGACTTCTGTAATGGTTTATACTATTGGCTGCATAAATTAGGAATTTAAGAATTCCATTCACTAAGCACTTTGGACGGGTCCATTGTCTTTTGCCAAATTTGTTCTATTGCTCTGTCTAGTGAACATATCTTGTTGATTCTAATACACAATAAAAGGTTTTTGATCTCTTGGGAGTTGCAACCTTGAAATGGGATTTTTTATGGATCGCGCTTTTTAAGGTCGCAAATGGAATTTGGCGCAGTGGTGTTTGAAATCAAATGAAAATTTTCCTTTCGTACGTAAATCTTGTTTCTTCCTCATTTTGATCTTTTTCCTCATCAAATTTGCAATTTTTTTCCCTTCATTTGGAGTTTTCCTCCCGTTTCTTCTATGTGCTCCTTGGTCTCGCACTCGCTTCTTCCTTAGGAGAAAGGTTGCGGAACAAAAAATGATGAAAAAAATTGCAAAAC

mRNA sequence

TTTCAAAAAAAAAAAGGTCACATCCGTGGTTTTTACTTTAAGCTCCCCGGGCCGTAGCTCTTCGCGCTCTCTCTTTCTCTCTCAGCTCAGGTTGTGCGTTTGATCGGTGGATCAATGGCGTCAAGTCTGTTCAAATTGCTTCTTGAATCTTCTTCTAATATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGAAGGCCGCATCGTTGCTTGTGAAGGAGACAGCAATCCTGCCCTTGGACATCCAATTGAGTTCATATGCCTCGATCGGGAAGAGCCCGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAAATGTGCAAATGATTATTCCAGCAAGCAACCCGGAACTTAAAGTCTATTGTACCTTTCTAAACTCGACTTCTGTAATGGTTTATACTATTGGCTGCATAAATTAGGAATTTAAGAATTCCATTCACTAAGCACTTTGGACGGGTCCATTGTCTTTTGCCAAATTTGTTCTATTGCTCTGTCTAGTGAACATATCTTGTTGATTCTAATACACAATAAAAGGTTTTTGATCTCTTGGGAGTTGCAACCTTGAAATGGGATTTTTTATGGATCGCGCTTTTTAAGGTCGCAAATGGAATTTGGCGCAGTGGTGTTTGAAATCAAATGAAAATTTTCCTTTCGTACGTAAATCTTGTTTCTTCCTCATTTTGATCTTTTTCCTCATCAAATTTGCAATTTTTTTCCCTTCATTTGGAGTTTTCCTCCCGTTTCTTCTATGTGCTCCTTGGTCTCGCACTCGCTTCTTCCTTAGGAGAAAGGTTGCGGAACAAAAAATGATGAAAAAAATTGCAAAAC

Coding sequence (CDS)

ATGGCGTCAAGTCTGTTCAAATTGCTTCTTGAATCTTCTTCTAATATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGAAGGCCGCATCGTTGCTTGTGAAGGAGACAGCAATCCTGCCCTTGGACATCCAATTGAGTTCATATGCCTCGATCGGGAAGAGCCCGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAG

Protein sequence

MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Homology
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BLAST of Pay0009939 vs. ExPASy Swiss-Prot
Match: Q9M9M6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g03070 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.5e-39
Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINE 60
           MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

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BLAST of Pay0009939 vs. ExPASy TrEMBL
Match: A0A1S3CI88 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501074 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.0e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Pay0009939 vs. ExPASy TrEMBL
Match: A0A0A0LNG2 (zf-CHCC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV G
Sbjct: 1   MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ HHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103

[Close]
BLAST of Pay0009939 vs. ExPASy TrEMBL
Match: A0A6J1D4A8 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017141 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.0e-49
Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MAS+LFK ++ESSS  PSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Pay0009939 vs. ExPASy TrEMBL
Match: A0A6J1FXJ3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111448533 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.0e-49
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPGLGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Pay0009939 vs. ExPASy TrEMBL
Match: A0A6J1JEL4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484323 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS  PSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKTPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Pay0009939 vs. NCBI nr
Match: XP_008462784.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 4.2e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Pay0009939 vs. NCBI nr
Match: XP_004151845.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis sativus] >KGN63363.1 hypothetical protein Csa_022615 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 3.0e-50
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV G
Sbjct: 1   MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ HHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103

[Close]
BLAST of Pay0009939 vs. NCBI nr
Match: XP_038900460.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS IPSS RNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKIPSSARNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDNNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Pay0009939 vs. NCBI nr
Match: XP_023511819.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6571206.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011009.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.1 bits (518), Expect = 5.6e-49
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]
BLAST of Pay0009939 vs. NCBI nr
Match: XP_022943963.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata])

HSP 1 Score: 202.6 bits (514), Expect = 1.6e-48
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS IPSS R+LSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPGLGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

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BLAST of Pay0009939 vs. TAIR 10
Match: AT3G03070.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 161.4 bits (407), Expect = 3.9e-40
Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 0 

Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINE 60
           MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

The following BLAST results are available for this feature:
BLAST of Pay0009939 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9M65.5e-3970.27NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidop... [more]
BLAST of Pay0009939 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CI882.0e-52100.00NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis ... [more]
A0A0A0LNG21.4e-5097.09zf-CHCC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=... [more]
A0A6J1D4A88.0e-4991.26NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Momordic... [more]
A0A6J1FXJ38.0e-4993.20NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbit... [more]
A0A6J1JEL41.0e-4893.20NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucurbit... [more]
BLAST of Pay0009939 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462784.14.2e-52100.00PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial ... [more]
XP_004151845.13.0e-5097.09NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis sa... [more]
XP_038900460.11.5e-4995.15NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa ... [more]
XP_023511819.15.6e-4994.17NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucur... [more]
XP_022943963.11.6e-4893.20NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita ... [more]
BLAST of Pay0009939 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03070.13.9e-4070.27NADH-ubiquinone oxidoreductase-related [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.260.40q5lls5 like domainscoord: 49..99
e-value: 7.4E-16
score: 59.6
NoneNo IPR availablePANTHERPTHR13156:SF1BNAC04G49950D PROTEINcoord: 1..103
NoneNo IPR availablePANTHERPTHR13156NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNITcoord: 1..103
IPR019401Zinc finger, CHCC-typePFAMPF10276zf-CHCCcoord: 60..97
e-value: 6.2E-15
score: 55.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0009939.1Pay0009939.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
cellular_component GO:0005747 mitochondrial respiratory chain complex I