Pay0009887 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009887
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	thylakoid lumenal 16.5 kDa protein, chloroplastic
Location	chr05: 2515062 .. 2518402 (+)
RNA-Seq Expression	Pay0009887
Synteny	Pay0009887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCTTTGGAGGAAAATGAATGGACAAGATGATGGAATCCACCAACCTTATCCCCCAAAGTCCCAACTACCCAATGCCTCTGATTTTGCACCAAAGGAAAAAGAAAATAAAAAAAAACCCAAGAAAATTAGGCAAAAGAGAAGAAAAAGGGTTAAGAAAAAAAAAATAAAAAAGTACAGAGATGGCAACATCCTTCCTATCAACAGCAAACACATTCCATTCTTCCACACCTTCATCTTCATCTTCATCTTCTTCCTATTCTTCACCTCCATTGTTGAGATCAAGATTTGGTTGCCTTTATTGCCATAATAACACTAAACGACTGGTTATCTGCAAGAGTAGTAGTGACCCACCTTCCAAAATTCCAGCTTTAACCAAGAGAACCCTCTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTTGTGGGTCAGGGATTTTCCGATGCAAATGCTGCGATTCTTGAAGCTGATGATGATGAGGAGCTGCTGGAGAAGGTGAAGAAGGATAGAAAGAAAAGGCTCGAGAAGCAAGGGGTTATCAGTTCTGCCAATAAAGAAAAAGGTTTTGTATGCATTCTACCTGTTTGTGTTTTGTTTTCTGGGAAACTTCCAACTTGGAAATTTGATCATAGCTATGAATATGTTTAGATTGTCCAATTGGATTCTTTGTTTCGATTCACAAATGCGCTCATATTTGTTCCTTATAATAGTTGCATTTTTTTTTTCTTTTCTTGCAACTACTATAAGAATGAAAATGTGAGAGCACATAACACCAATCTTTCTCTCTGCCGGTGATTATTAGGTTGTTATATGGTGGAGGATAATTTTAAGATGAAGTTGTTAGAAGAACTTGATAGAAAACAAGAAAATAAATTAGTGCGAAGCCAATTACTTAGGTTCTGTCTCTAACCATTTGGATTTTTAAAATCAAGCTTATAAACACTACTTCCATGTGTTCTTAAGAAATCACGAATGACTTACCTAAAAATTACGAGCAATGTTCAAAAACTTAAAACAAAAAATAAGATATTGTCAAATTTACAACACTTGCATGAAAAAGCTAATTCAGCAATACATAAATGGACATGGAAAAGTAGAGAGGCGTGGATATAAGAAATGTAGAGAAAAACAAGAAGAATAACTAGTTCTTTCCAATGAGCAAAATCAACAGAGACACATACAAATATATTGATGGGGGCCATCCTTGGGGATGGTAGATCTTTTCCTTGTTGATAAATGGAAAGATACATCAAATTATAAGGAGAACTGAAAGTAATTTATTCATGCCCATGAACTGACTCATGGGTTGTGTTTGTATAGCCTAGGGTTCTAAAGCCAAGCATACGTATGTAATGTGGGCTTTCTTCTCTCCTGGCTATAGGTTTAGTATCCTATGGACTACTTGAATCTAAGTTTTTCAAACTCATTCTTCAAGCCACGTATTTACTTCTGCAAACCACAAACCTACAAATCAAATACACCCATATAGACTCAGCTTTCCACCATTCAAATCCTTCTTACATTCTATACAAGATCATCCTTTTCAACCTCATTTGAACAAACCTACACGTGTTAAAACAGTTAGTCAAACAATCCTTTATGAAGTAGTCTTGGCTTCTGAAATCATGCGACTTAATTCTTCATGTCGGTGGATCACAAGTTCTGTGTTGTTGCAGTCAATCATAAAGTTAAGCTATCAAAGCTAAGCTATGAGCGAAGGCATCTGAAACAAGCTAAAACCTTACCATAATCATTTGGTCTTTTTGCAGGATACCTCCAGGAACTTGTGTACAAGCTGAGCAAAGTAGGCCAAGCCATTGATGATAATGACTTCACAACAGCAAGTTCAGTTCTTGGGGGTAGTAGTGATGCAGATTGGGTCCAGAATGCCAATTTAGCCTTCAACAAGGTTAGCAAAATATCTACAACAAAATCAAGTCTGTTTATATTACTTTCTGGAAGTTTTGATCTTTGGTTAGAATGCACATTGGTTCACAAAGTACTAATGAGTTTGAGTCAAACTTAACAACAAAAAGATAAAATAAAATTAAATAAAAAGATCACTTAGAACATGACAGGATGTGTTTTATCTGGTATAAAAATTAAAGCATGTTTACCGTGGATATACGACGGCATGGCTTCTATATCACCATATCCAAAAAGCATGATTTTGTATGAACTTTTACTTAGACAAATTTACTGAATATGATGTAAACGATTAAAATTTTATTGTAACAAATTTCGCTTCTTTTTTCTTTAAGGCACATCAATCAAGCTTGATGCCATCATATATTATTTCATTTTTTCAAATGAAGTAGAAACTAGACCATCTAAAAAACAATTTATTAGACCAAGATGTTCAAATTTTCAAATTTGGAAGATCAAAATGGAAACAAGCATTTAATTCAGGGACATATATTTTAGCCTTGAACCTCCTCATCTTTCTTGCTAGCAGCCCATTTGATGTAATATTCTATGATGAATGGTAAACAGGTGAACTCAAGATATTTGTCAGGTTGGTTAGAAGTTAACTGATTCTTTGAGAAATTTCTGACTTTTGTGTTAAACTTCTTGACCAGCTGAGTTCAAGTCCCGAAGAGAAATCTGAGGTGGACGCATTCAACTCCTCTTTAGCTTCATTAATCTCATCAGGTGGGTTATCTTTTAATAAATTATGCAGTAGTCAAGATAAAACAGAATGTAACATTTTGCAGAGGATAAAACTACTAAGAATTGAAAGATTTAACCCCCCGGAGTTCTAAACAATGGAACATTTTTGCATTGCAGTTACTAAGAGTGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCTAGTGCATTTGAGAAATGGACAGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGCCTTTGAGTTGAAAAAACAACGATCTGCATCGATCTCATTTATTCTAAGAATGACCCACTGTATTTTTATAGTCTCCACCTATTTTTTTTCCCTCCCAAATCTTTGCAATTAAAAGTCAAAGAAGCTGATTTTTCTTGTCATCTTCTCACTGAGTTTCTGGTGTCAATGTTACTGAACTTTGAATGGATAGATTCCGTTGGTTAATTTGAATGTTATTAGTGATTATCCACGAAAACCTACACTTCTGTTTATGAACAAAGCTAAATATCAGTTCACTTAGCTTTACCAAAATACTAGCAGAACTATGGATCATTAGGATAGATCAAGAATAACCGAAAGACTTATCTTCTCCCAGTAGATCCCATGGGTTTTGAGATTTTTGTAATAAAATTCTCTTTTCTTAGTGACTTGACCAACTAAGTCGACTGGACAGTTCCAACTGTAAT

mRNA sequence

AAAACCCTTTGGAGGAAAATGAATGGACAAGATGATGGAATCCACCAACCTTATCCCCCAAAGTCCCAACTACCCAATGCCTCTGATTTTGCACCAAAGGAAAAAGAAAATAAAAAAAAACCCAAGAAAATTAGGCAAAAGAGAAGAAAAAGGGTTAAGAAAAAAAAAATAAAAAAGTACAGAGATGGCAACATCCTTCCTATCAACAGCAAACACATTCCATTCTTCCACACCTTCATCTTCATCTTCATCTTCTTCCTATTCTTCACCTCCATTGTTGAGATCAAGATTTGGTTGCCTTTATTGCCATAATAACACTAAACGACTGGTTATCTGCAAGAGTAGTAGTGACCCACCTTCCAAAATTCCAGCTTTAACCAAGAGAACCCTCTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTTGTGGGTCAGGGATTTTCCGATGCAAATGCTGCGATTCTTGAAGCTGATGATGATGAGGAGCTGCTGGAGAAGGTGAAGAAGGATAGAAAGAAAAGGCTCGAGAAGCAAGGGGTTATCAGTTCTGCCAATAAAGAAAAAGGATACCTCCAGGAACTTGTGTACAAGCTGAGCAAAGTAGGCCAAGCCATTGATGATAATGACTTCACAACAGCAAGTTCAGTTCTTGGGGGTAGTAGTGATGCAGATTGGGTCCAGAATGCCAATTTAGCCTTCAACAAGCTGAGTTCAAGTCCCGAAGAGAAATCTGAGGTGGACGCATTCAACTCCTCTTTAGCTTCATTAATCTCATCAGTTACTAAGAGTGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCTAGTGCATTTGAGAAATGGACAGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGCCTTTGAGTTGAAAAAACAACGATCTGCATCGATCTCATTTATTCTAAGAATGACCCACTGTATTTTTATAGTCTCCACCTATTTTTTTTCCCTCCCAAATCTTTGCAATTAAAAGTCAAAGAAGCTGATTTTTCTTGTCATCTTCTCACTGAGTTTCTGGTGTCAATGTTACTGAACTTTGAATGGATAGATTCCGTTGGTTAATTTGAATGTTATTAGTGATTATCCACGAAAACCTACACTTCTGTTTATGAACAAAGCTAAATATCAGTTCACTTAGCTTTACCAAAATACTAGCAGAACTATGGATCATTAGGATAGATCAAGAATAACCGAAAGACTTATCTTCTCCCAGTAGATCCCATGGGTTTTGAGATTTTTGTAATAAAATTCTCTTTTCTTAGTGACTTGACCAACTAAGTCGACTGGACAGTTCCAACTGTAAT

Coding sequence (CDS)

ATGGCAACATCCTTCCTATCAACAGCAAACACATTCCATTCTTCCACACCTTCATCTTCATCTTCATCTTCTTCCTATTCTTCACCTCCATTGTTGAGATCAAGATTTGGTTGCCTTTATTGCCATAATAACACTAAACGACTGGTTATCTGCAAGAGTAGTAGTGACCCACCTTCCAAAATTCCAGCTTTAACCAAGAGAACCCTCTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTTGTGGGTCAGGGATTTTCCGATGCAAATGCTGCGATTCTTGAAGCTGATGATGATGAGGAGCTGCTGGAGAAGGTGAAGAAGGATAGAAAGAAAAGGCTCGAGAAGCAAGGGGTTATCAGTTCTGCCAATAAAGAAAAAGGATACCTCCAGGAACTTGTGTACAAGCTGAGCAAAGTAGGCCAAGCCATTGATGATAATGACTTCACAACAGCAAGTTCAGTTCTTGGGGGTAGTAGTGATGCAGATTGGGTCCAGAATGCCAATTTAGCCTTCAACAAGCTGAGTTCAAGTCCCGAAGAGAAATCTGAGGTGGACGCATTCAACTCCTCTTTAGCTTCATTAATCTCATCAGTTACTAAGAGTGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCTAGTGCATTTGAGAAATGGACAGCCTTGGCAGGGCTTGTTGGACAGCTGAAGGGCCTTTGA

Protein sequence

MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPEEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL

Homology

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BLAST of Pay0009887 vs. ExPASy Swiss-Prot
Match: O22773 (Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g02530 PE=1 SV=3)

HSP 1 Score: 202.6 bits (514), Expect = 4.9e-51
Identity = 116/172 (67.44%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 66  KRTLSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVISS 125
           +R LS+ F+SS +   LV   +   DANAAILEADDDEELLEKVK+DRKKR+E+Q V++S
Sbjct: 45  RRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRIERQAVLNS 104

Query: 126 ANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPEEK 185
           A KEKGYLQ+LVYKLSKVGQAI++ND   A  VLG   D +WV+  NLAF KLS+SPEE 
Sbjct: 105 AVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKLSTSPEEN 164

Query: 186 SEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           +EV+AFNSSLASLI+SV K+D+ESSK AFV+SA AFEKWT L GL+ QLKGL
Sbjct: 165 TEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216

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BLAST of Pay0009887 vs. ExPASy TrEMBL
Match: A0A5A7V8J2 (Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00360 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.1e-117
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60
           MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120
           IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180
           SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180

Query: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

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BLAST of Pay0009887 vs. ExPASy TrEMBL
Match: A0A1S3C541 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497128 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.1e-117
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60
           MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120
           IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180
           SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180

Query: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

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BLAST of Pay0009887 vs. ExPASy TrEMBL
Match: A0A0A0LI29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110
Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTP----SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSD 60
           MAT+FLSTANTFHSSTP    SSSSSSSSY +PPL+RSRFGCLYCHNNTKRLVICKSSSD
Sbjct: 1   MATAFLSTANTFHSSTPSSPSSSSSSSSSYFTPPLIRSRFGCLYCHNNTKRLVICKSSSD 60

Query: 61  PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK 120
           PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK
Sbjct: 61  PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK 120

Query: 121 QGVISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLS 180
           QGVISSANKEKGYLQELVYKLSKVGQAID+NDF+TASSVLGGSSDADWV+ AN AFNKLS
Sbjct: 121 QGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVKKANSAFNKLS 180

Query: 181 SSPEEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           SSPEEKSEVDAFNSSLASLISSVTK+DVESSKTAFVASASAFEKWTALAGLVGQLKGL
Sbjct: 181 SSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWTALAGLVGQLKGL 238

[Close]

BLAST of Pay0009887 vs. ExPASy TrEMBL
Match: A0A6J1KEL3 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493636 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.2e-102
Identity = 209/235 (88.94%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTP-SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPS 60
           MATSFLSTANTFHSS+P SSSSSSSS SSPPLLRSRF CL C NN +R VICK ++DPPS
Sbjct: 1   MATSFLSTANTFHSSSPSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRSVICKGNNDPPS 60

Query: 61  KIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGV 120
           KIP+LTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QGV
Sbjct: 61  KIPSLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120

Query: 121 ISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSP 180
           ISSANKEKGYLQE+V+KLSKVGQAID+NDF+TASSVLGGS+DADWV+NANLAFNKLS+SP
Sbjct: 121 ISSANKEKGYLQEVVFKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSTSP 180

Query: 181 EEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           EEKSEVDAFNSSLASLISSVT++DV+SSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235

[Close]

BLAST of Pay0009887 vs. ExPASy TrEMBL
Match: A0A6J1G2S1 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450272 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 210/236 (88.98%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTP--SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPP 60
           MATSFLSTANTFHSSTP  SSSSSSSS SSPPLLRSRF CL   NN +RLVICK ++DPP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNYRNNARRLVICKGNNDPP 60

Query: 61  SKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQG 120
           S+IP LTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QG
Sbjct: 61  SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120

Query: 121 VISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSS 180
           VISSANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLGGS+DADWV+NANLAFNKLSSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180

Query: 181 PEEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           PEEKSEVDAFNSSLASLISSVT++DV+SSKTAFVA ASA EKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVALASALEKWTALAGLVGQLKGL 236

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BLAST of Pay0009887 vs. NCBI nr
Match: XP_008457444.1 (PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis melo] >KAA0063500.1 thylakoid lumenal 16.5 kDa protein [Cucumis melo var. makuwa] >TYJ97826.1 thylakoid lumenal 16.5 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 429.5 bits (1103), Expect = 1.9e-116
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60
           MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120
           IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180
           SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180

Query: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

[Close]

BLAST of Pay0009887 vs. NCBI nr
Match: XP_004139301.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis sativus] >KGN60689.1 hypothetical protein Csa_019422 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 7.6e-110
Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTP----SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSD 60
           MAT+FLSTANTFHSSTP    SSSSSSSSY +PPL+RSRFGCLYCHNNTKRLVICKSSSD
Sbjct: 1   MATAFLSTANTFHSSTPSSPSSSSSSSSSYFTPPLIRSRFGCLYCHNNTKRLVICKSSSD 60

Query: 61  PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK 120
           PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK
Sbjct: 61  PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK 120

Query: 121 QGVISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLS 180
           QGVISSANKEKGYLQELVYKLSKVGQAID+NDF+TASSVLGGSSDADWV+ AN AFNKLS
Sbjct: 121 QGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVKKANSAFNKLS 180

Query: 181 SSPEEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           SSPEEKSEVDAFNSSLASLISSVTK+DVESSKTAFVASASAFEKWTALAGLVGQLKGL
Sbjct: 181 SSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWTALAGLVGQLKGL 238

[Close]

BLAST of Pay0009887 vs. NCBI nr
Match: XP_038889145.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106
Identity = 217/237 (91.56%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTP---SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDP 60
           MATSFLSTANTFHSSTP   SSSSSSSS SSPPLLRSRFGCL+CHNNTKRLVICK  +DP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSSPPLLRSRFGCLHCHNNTKRLVICKGINDP 60

Query: 61  PSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQ 120
           PS+IPALTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+Q
Sbjct: 61  PSQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQ 120

Query: 121 GVISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSS 180
           GVISSANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLGGSSDADWV+NANLAFNKLSS
Sbjct: 121 GVISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVRNANLAFNKLSS 180

Query: 181 SPEEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           SPEEKSEVDAFNSSLASLISSVT++DVESSKTAFVASASA EKWTA+ GLVGQLKGL
Sbjct: 181 SPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTAMVGLVGQLKGL 237

[Close]

BLAST of Pay0009887 vs. NCBI nr
Match: KAG6599393.1 (Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 212/236 (89.83%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTP--SSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPP 60
           MATSFLSTANTFHSSTP  SSSSSSSS SSPPLLRSRF CL C NN +RLVICK ++DPP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRLVICKGNNDPP 60

Query: 61  SKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQG 120
           S+IP LTKR+LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QG
Sbjct: 61  SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120

Query: 121 VISSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSS 180
           VISSANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLGGS+DADWV+NANLAFNKLSSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSS 180

Query: 181 PEEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           PEEKSEVDAFNSSLASLISSVT++DV+SSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236

[Close]

BLAST of Pay0009887 vs. NCBI nr
Match: XP_023545851.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545852.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545854.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.0 bits (985), Expect = 9.0e-103
Identity = 210/234 (89.74%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60
           MATSFLSTANTFHSSTPSSSSSSS  SSPPLLRSRF CL C NN +RLVICK ++DPPS+
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSS--SSPPLLRSRFSCLNCRNNARRLVICKGNNDPPSQ 60

Query: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120
           IP LTKR+LSICFIS FIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QGVI
Sbjct: 61  IPTLTKRSLSICFISGFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVI 120

Query: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPE 180
           SSANKEKGYLQE+VYKLSKVGQAID+NDF+TASSVLGGS+DADWV+NANLAFNKLSSSPE
Sbjct: 121 SSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNKLSSSPE 180

Query: 181 EKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           EKSEVDAFNSSLASLISSVT++DV+SSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 EKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 232

[Close]

BLAST of Pay0009887 vs. TAIR 10
Match: AT4G02530.1 (chloroplast thylakoid lumen protein )

HSP 1 Score: 202.6 bits (514), Expect = 3.5e-52
Identity = 116/172 (67.44%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 66  KRTLSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVISS 125
           +R LS+ F+SS +   LV   +   DANAAILEADDDEELLEKVK+DRKKR+E+Q V++S
Sbjct: 45  RRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRIERQAVLNS 104

Query: 126 ANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNKLSSSPEEK 185
           A KEKGYLQ+LVYKLSKVGQAI++ND   A  VLG   D +WV+  NLAF KLS+SPEE 
Sbjct: 105 AVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKLSTSPEEN 164

Query: 186 SEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 235
           +EV+AFNSSLASLI+SV K+D+ESSK AFV+SA AFEKWT L GL+ QLKGL
Sbjct: 165 TEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216

The following BLAST results are available for this feature:

BLAST of Pay0009887 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22773	4.9e-51	67.44	Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Pay0009887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8J2	9.1e-117	100.00	Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C541	9.1e-117	100.00	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LI29	3.7e-110	94.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1	[more]
A0A6J1KEL3	2.2e-102	88.94	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1G2S1	1.1e-101	88.98	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Pay0009887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457444.1	1.9e-116	100.00	PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis melo] >KAA...	[more]
XP_004139301.1	7.6e-110	94.12	thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis sativus] >KGN60689.1 ...	[more]
XP_038889145.1	2.3e-106	91.56	thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Benincasa hispida]	[more]
KAG6599393.1	2.4e-103	89.83	Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_023545851.1	9.0e-103	89.74	thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo sub...	[more]

BLAST of Pay0009887 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02530.1	3.5e-52	67.44	chloroplast thylakoid lumen protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
IPR038862	Chloroplast thylakoid lumenal protein MPH2	PANTHER	PTHR35742	THYLAKOID LUMENAL 16.5 KDA PROTEIN, CHLOROPLASTIC	coord: 1..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009887.1	Pay0009887.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010206	photosystem II repair