Pay0009797 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009797
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag-pol polyprotein
Location	chr06: 8337440 .. 8337943 (+)
RNA-Seq Expression	Pay0009797
Synteny	Pay0009797

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCTTGGTGAAAGAGGATATTCCAGGGGTGAAACTGACAAGACACTATTTATAAATAGAACCAACACTGATCTCATCATAGCTCAAATTTATGTTGATGATATTATCTTTGGAGGATCTTCTACTACTTCGATCTCTATGTTTGTGGAATAGATAAAGTCAAAATTCGAAATGAGCCTAGTATGCGAACTGTCTTGCTTTCTGGGGTTGCAGATCAAACAGAGAAGTGAAGATATGTTTATATCACAAGAGAAGTATGCCAAGAACTTAGTCAAGAAGTTTGGTCTGGATCAGTCACAATACAAAAGGGCTCCAGCTGTGACTCATGCTAAAATTACCAAGGATACGGTAGGTACTGCAGTCGATCTTAAATTGTACAGAAGCATGATTGGAAGCCTCCTACATTTAACAACAAGCAGACCTAATATTGCCTATGGTGTGGGATTATGTGCTCGGTATCAGTCAGATCCACGTACCTCTCATTTAAATGCAGTTAAATGA

mRNA sequence

ATGTATCTTGGTGAAAGAGGATATTCCAGGGGTGAAACTGACAAGACACTATTTATAAATAGAACCAACACTGATCTCATCATAGCTCAAATTTATGTTGATGATATTATCTTTGGAGGATCTTCTACTACTTCGATCTCTATCCTAGTATGCGAACTGTCTTGCTTTCTGGGGTTGCAGATCAAACAGAGAAGTGAAGATATGTTTATATCACAAGAGAAGTATGCCAAGAACTTAGTCAAGAAGTTTGGTCTGGATCAGTCACAATACAAAAGGGCTCCAGCTGTGACTCATGCTAAAATTACCAAGGATACGGTAGGTACTGCAGTCGATCTTAAATTGTACAGAAGCATGATTGGAAGCCTCCTACATTTAACAACAAGCAGACCTAATATTGCCTATGGTGTGGGATTATGTGCTCGGTATCAGTCAGATCCACGTACCTCTCATTTAAATGCAGTTAAATGA

Coding sequence (CDS)

ATGTATCTTGGTGAAAGAGGATATTCCAGGGGTGAAACTGACAAGACACTATTTATAAATAGAACCAACACTGATCTCATCATAGCTCAAATTTATGTTGATGATATTATCTTTGGAGGATCTTCTACTACTTCGATCTCTATCCTAGTATGCGAACTGTCTTGCTTTCTGGGGTTGCAGATCAAACAGAGAAGTGAAGATATGTTTATATCACAAGAGAAGTATGCCAAGAACTTAGTCAAGAAGTTTGGTCTGGATCAGTCACAATACAAAAGGGCTCCAGCTGTGACTCATGCTAAAATTACCAAGGATACGGTAGGTACTGCAGTCGATCTTAAATTGTACAGAAGCATGATTGGAAGCCTCCTACATTTAACAACAAGCAGACCTAATATTGCCTATGGTGTGGGATTATGTGCTCGGTATCAGTCAGATCCACGTACCTCTCATTTAAATGCAGTTAAATGA

Protein sequence

MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSISILVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGTAVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK

Homology

[Close]

BLAST of Pay0009797 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.3e-11
Identity = 48/176 (27.27%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 2    YLGERGYSRGETDKTLFINR-TNTDLIIAQIYVDDIIFGGSSTTSISILVCELS------ 61
            ++  + Y +  +D  ++  R +  + II  +YVDD++  G     I+ L  +LS      
Sbjct: 977  FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1036

Query: 62   ------CFLGLQI--KQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTV 121
                    LG++I  ++ S  +++SQEKY + ++++F +  ++    P   H K++K   
Sbjct: 1037 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1096

Query: 122  GTAVDLK------LYRSMIGSLLH-LTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
             T V+ K       Y S +GSL++ +  +RP+IA+ VG+ +R+  +P   H  AVK
Sbjct: 1097 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVK 1152

[Close]

BLAST of Pay0009797 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 31  IYVDDIIFGGSSTTSISILVCELSC------------FLGLQIKQRSEDMFISQEKYAKN 90
           +YVDDI+  GSS T +++L+ +LS             FLG+QIK     +F+SQ KYA+ 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  LVKKFGLDQSQYKRAPAVTHAKITKDTVGTAVDLKLYRSMIGSLLHLTTSRPNIAYGVGL 150
           ++   G+   +    P       +  T     D   +RS++G+L +LT +RP+I+Y V +
Sbjct: 65  ILNNAGMLDCKPMSTPLPLKLNSSVST-AKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 151 CARYQSDPRTSHLNAVK 156
             +   +P  +  + +K
Sbjct: 125 VCQRMHEPTLADFDLLK 140

[Close]

BLAST of Pay0009797 vs. ExPASy TrEMBL
Match: A0A1S4DUL4 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107990507 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 147/167 (88.02%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDI FGG   T ++             
Sbjct: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDITFGGFPKTLVNNFINIMKSKFEMS 60

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT
Sbjct: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK
Sbjct: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 167

[Close]

BLAST of Pay0009797 vs. ExPASy TrEMBL
Match: A0A5D3CS19 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001080 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62
Identity = 131/167 (78.44%), Postives = 140/167 (83.83%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGER YSRGETDKTLFINRT+T+LI+AQIYVDDIIFGG   T +              
Sbjct: 813 MYLGERVYSRGETDKTLFINRTSTNLIVAQIYVDDIIFGGFPKTLVDNFINIMKSEFEMS 872

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MFISQEKYAKNLVKKFGLDQSQ+KR PAVTHAKITKD VGT
Sbjct: 873 LVGELSCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLDQSQHKRTPAVTHAKITKDMVGT 932

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
            VD KLYRSMIGSLL+LTTSRP+IAY VG+CARYQSD RTSHLNA+K
Sbjct: 933 EVDHKLYRSMIGSLLYLTTSRPDIAYVVGICARYQSDSRTSHLNAIK 979

[Close]

BLAST of Pay0009797 vs. ExPASy TrEMBL
Match: A0A5A7UF87 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004260 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 130/167 (77.84%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTL INRT+TDLI+AQIYVDDIIFGG   T ++             
Sbjct: 562 MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMS 621

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MF+SQEKYAKNLVKKFGLDQSQYKR PA THAKITKDTVGT
Sbjct: 622 LVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGT 681

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVD KLYRSMIGS L+L  SRP+IAY V +CARYQSDP TSHLNAVK
Sbjct: 682 AVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVK 728

[Close]

BLAST of Pay0009797 vs. ExPASy TrEMBL
Match: A0A1S4E1S5 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107991476 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 130/167 (77.84%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTL INRT+TDLI+AQIYVDDIIFGG   T ++             
Sbjct: 1   MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMS 60

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MF+SQEKYAKNLVKKFGLDQSQYKR PA THAKITKDTVGT
Sbjct: 61  LVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGT 120

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVD KLYRSMIGS L+L  SRP+IAY V +CARYQSDP TSHLNAVK
Sbjct: 121 AVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVK 167

[Close]

BLAST of Pay0009797 vs. ExPASy TrEMBL
Match: A0A5D3BY43 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00230 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61
Identity = 127/167 (76.05%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTLFIN+T+TDLI+AQIYVDDIIFGG   T ++             
Sbjct: 223 MYLGERGYSRGETDKTLFINKTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMKSEFEMS 282

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MFISQEKYAKNLVKKFGL QSQYK+ PA TH KITKDT+GT
Sbjct: 283 LVGELSCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLYQSQYKKTPAATHTKITKDTIGT 342

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVD KLYRSMIGSLL+L  S P+I Y VG+C RYQSDPRTSHLNAVK
Sbjct: 343 AVDHKLYRSMIGSLLYLIASIPDIDYAVGICVRYQSDPRTSHLNAVK 389

[Close]

BLAST of Pay0009797 vs. NCBI nr
Match: XP_016899410.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 6.5e-73
Identity = 147/167 (88.02%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDI FGG   T ++             
Sbjct: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDITFGGFPKTLVNNFINIMKSKFEMS 60

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT
Sbjct: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK
Sbjct: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 167

[Close]

BLAST of Pay0009797 vs. NCBI nr
Match: KAA0054435.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK14601.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 3.9e-62
Identity = 131/167 (78.44%), Postives = 140/167 (83.83%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGER YSRGETDKTLFINRT+T+LI+AQIYVDDIIFGG   T +              
Sbjct: 813 MYLGERVYSRGETDKTLFINRTSTNLIVAQIYVDDIIFGGFPKTLVDNFINIMKSEFEMS 872

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MFISQEKYAKNLVKKFGLDQSQ+KR PAVTHAKITKD VGT
Sbjct: 873 LVGELSCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLDQSQHKRTPAVTHAKITKDMVGT 932

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
            VD KLYRSMIGSLL+LTTSRP+IAY VG+CARYQSD RTSHLNA+K
Sbjct: 933 EVDHKLYRSMIGSLLYLTTSRPDIAYVVGICARYQSDSRTSHLNAIK 979

[Close]

BLAST of Pay0009797 vs. NCBI nr
Match: KAA0054623.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 130/167 (77.84%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTL INRT+TDLI+AQIYVDDIIFGG   T ++             
Sbjct: 562 MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMS 621

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MF+SQEKYAKNLVKKFGLDQSQYKR PA THAKITKDTVGT
Sbjct: 622 LVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGT 681

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVD KLYRSMIGS L+L  SRP+IAY V +CARYQSDP TSHLNAVK
Sbjct: 682 AVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVK 728

[Close]

BLAST of Pay0009797 vs. NCBI nr
Match: XP_016901935.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 130/167 (77.84%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTL INRT+TDLI+AQIYVDDIIFGG   T ++             
Sbjct: 1   MYLGERGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMS 60

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MF+SQEKYAKNLVKKFGLDQSQYKR PA THAKITKDTVGT
Sbjct: 61  LVGELSCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGT 120

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVD KLYRSMIGS L+L  SRP+IAY V +CARYQSDP TSHLNAVK
Sbjct: 121 AVDHKLYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVK 167

[Close]

BLAST of Pay0009797 vs. NCBI nr
Match: KAA0031683.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK04427.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 5.7e-61
Identity = 127/167 (76.05%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MYLGERGYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSIS------------I 60
           MYLGERGYSRGETDKTLFIN+T+TDLI+AQIYVDDIIFGG   T ++             
Sbjct: 223 MYLGERGYSRGETDKTLFINKTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMKSEFEMS 282

Query: 61  LVCELSCFLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGT 120
           LV ELSCFLGLQIKQRSE MFISQEKYAKNLVKKFGL QSQYK+ PA TH KITKDT+GT
Sbjct: 283 LVGELSCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLYQSQYKKTPAATHTKITKDTIGT 342

Query: 121 AVDLKLYRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAVK 156
           AVD KLYRSMIGSLL+L  S P+I Y VG+C RYQSDPRTSHLNAVK
Sbjct: 343 AVDHKLYRSMIGSLLYLIASIPDIDYAVGICVRYQSDPRTSHLNAVK 389

[Close]

BLAST of Pay0009797 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 48/160 (30.00%), Postives = 80/160 (50.00%), Query Frame = 0


Query: 7   GYSRGETDKTLFINRTNTDLIIAQIYVDDIIFGGSSTTSISILVCEL-SC---------- 66
           G+ +  +D T F+  T T  +   +YVDDII   ++  ++  L  +L SC          
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317

Query: 67  -FLGLQIKQRSEDMFISQEKYAKNLVKKFGLDQSQYKRAPAVTHAKITKDTVGTAVDLKL 126
            FLGL+I + +  + I Q KYA +L+ + GL   +    P       +  + G  VD K 
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377

Query: 127 YRSMIGSLLHLTTSRPNIAYGVGLCARYQSDPRTSHLNAV 155
           YR +IG L++L  +R +I++ V   +++   PR +H  AV
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

[Close]

BLAST of Pay0009797 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 8.9e-12
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 31  IYVDDIIFGGSSTTSISILVCELSC------------FLGLQIKQRSEDMFISQEKYAKN 90
           +YVDDI+  GSS T +++L+ +LS             FLG+QIK     +F+SQ KYA+ 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  LVKKFGLDQSQYKRAPAVTHAKITKDTVGTAVDLKLYRSMIGSLLHLTTSRPNIAYGVGL 150
           ++   G+   +    P       +  T     D   +RS++G+L +LT +RP+I+Y V +
Sbjct: 65  ILNNAGMLDCKPMSTPLPLKLNSSVST-AKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 151 CARYQSDPRTSHLNAVK 156
             +   +P  +  + +K
Sbjct: 125 VCQRMHEPTLADFDLLK 140

The following BLAST results are available for this feature:

BLAST of Pay0009797 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.3e-11	27.27	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	1.2e-10	29.93	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0009797 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUL4	3.1e-73	88.02	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3CS19	1.9e-62	78.44	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G...	[more]
A0A5A7UF87	5.5e-62	77.84	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S4E1S5	5.5e-62	77.84	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3BY43	2.7e-61	76.05	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G...	[more]

BLAST of Pay0009797 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899410.1	6.5e-73	88.02	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0054435.1	3.9e-62	78.44	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK14601.1 gag-pol polyprotein [...	[more]
KAA0054623.1	1.1e-61	77.84	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_016901935.1	1.1e-61	77.84	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0031683.1	5.7e-61	76.05	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK04427.1 gag-pol polyprotein [...	[more]

BLAST of Pay0009797 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.1e-13	30.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	8.9e-12	29.93	DNA/RNA polymerases superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009797.1	Pay0009797.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding