Pay0009595 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009595
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Formamidopyrimidine-DNA glycosylase
Location	chr05: 28234203 .. 28236077 (+)
RNA-Seq Expression	Pay0009595
Synteny	Pay0009595

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCGGCAAAGGCAAAGCGAACCCAAAAAGCTTGGGGGTTTCGTAGCTTCGTAGCGTTGCTTTCATGGCGAGCTTCGTTTCTTTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGGTAAGTTATGCTTCTCAACGCCTTTCCTTTTATCGCATTTGTAGTTGTTGCGAATCAGATAGAACATCTACTCGATTGTTGCATAATGTTCAACGTAATAGGGAGAGAGAGCTCCATTTGAGGTAGCTTGTTTAGGTTTGCTATAATTCACCTCCCTGAATTTTCTTCTACCTTTTGGAAGACGATTGCATTCTCTTTTTTTTTTCCTTTTGGTGTACATGCTTTCCGGTGAAACGTTTGGGCTTGAGGAACTATTCTGAGACTTATTATTTGGTTGGACATTTTTCTATGGATGCTTGGGAAGTGTTCGTTGATTATTTGAGCTGAAATGGATTAAGACGGTGAATAATTCGGTATTCTGAAGAGAACATCGTCAGAAAATTAAGTTTATGAGATTATATAAGGAAAATTGAGGATGTTATTCTAATTTTGTTGTAACGATGGATTAGCGAGCAAATTTTTTATGGTTCATACGTAGTGCCATTTCTAACTGTAAATTTTTATGCAGCATCATCGAAAGGTTAGTTCAGATGCTAAAATCATTGCCTGAAGCTCAATCGTTAATCCTTGTTAAAGAAATATGAGCTGCTTATTTCTCTAGATTTTAAGGTTTTGATTGCACACTGACTTGTTCTCGGTGGTTCAGGAAATCCCACCATGGAAATTGGCTAAAGCTACGGTAGTTTCAAGGCGAGCTGGAACAGGTTTAATTCTCATTTTCTGTATGGTCAATTATTGCTGTGATAACCCGCATTTTAACTTAAAGTTTTTCTAGTTACATCTTGAGTATGAACGTCTATTAGTCCATGCATCTACTTGTTACAAAAGACGAATATCCCTATTCCGAAACATACACACAAGTCCTTGGGATTAAAATAGTCTATATTTCTTTACAATATACAGGCTCCACTAATTACATTGATTGAAAAATAGAAATCTACTGCAAAATTGATCGAAACCAGAAAAGTTAATGATTGAATGAAAGAAGCATTGTACCTTTACTCATGTAATGTAATTCTGTACCCACCATATACTATCTTGATTAGATTGAGTAAATTTTGGATGCTGATGATATGAATTGCATTGCAGCTTCGAAGCTTGTGCTACCCTGTTATTCAAAGAAATCCATATCTATGAATTGGGAAAACTTTCGATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTCCAGGAATATGGTATTATTAACTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAACAATTCAGACTTTAAATTTCATTTCATGATTTGTTTCTACTTACTATGTCTGATCTTAGTTGAATCATTGTATGCATTAGTCCATATCACTTGTTTTCATCCAAGTGCCTGAAACTACCTCCTGTTCGTGAAATTTTTATCTTGTTTGACCTGGGAAGATAGGTAAGTAACTTGATGCTGAGAGGTTACTTAAACCTCTAGATTTAGGATTTGATCGACTTTGTCCTGACATTGTCAGGATGGTACAAGCTATTTAGTGTGAGGCTAGCAAGGACGGTTGAGGTTTGCACGTTAGGAAACTTAAATACCCTCACGCTCTTTGTAAAATAGTTGTGCTACTTTAATTTTAGTCAATTAGTTTTGAGATGAAATCCTATGCTATCTAAAAGACCTACAGCTGTGTTTCTTATTCTCTCTTGAACCAGGGAGAGTGAGGGGAGAGATTAAGGTAATTTATAGTTG

mRNA sequence

CAGCGGCAAAGGCAAAGCGAACCCAAAAAGCTTGGGGGTTTCGTAGCTTCGTAGCGTTGCTTTCATGGCGAGCTTCGTTTCTTTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGGAAATCCCACCATGGAAATTGGCTAAAGCTACGGTAGTTTCAAGGCGAGCTGGAACAGCTTCGAAGCTTGTGCTACCCTGTTATTCAAAGAAATCCATATCTATGAATTGGGAAAACTTTCGATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTCCAGGAATATGGTATTATTAACTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAACAATTCAGACTTTAAATTTCATTTCATGATTTGTTTCTACTTACTATGTCTGATCTTAGTTGAATCATTGTATGCATTAGTCCATATCACTTGTTTTCATCCAAGTGCCTGAAACTACCTCCTGTTCGTGAAATTTTTATCTTGTTTGACCTGGGAAGATAGGTAAGTAACTTGATGCTGAGAGGTTACTTAAACCTCTAGATTTAGGATTTGATCGACTTTGTCCTGACATTGTCAGGATGGTACAAGCTATTTAGTGTGAGGCTAGCAAGGACGGTTGAGGTTTGCACGTTAGGAAACTTAAATACCCTCACGCTCTTTGTAAAATAGTTGTGCTACTTTAATTTTAGTCAATTAGTTTTGAGATGAAATCCTATGCTATCTAAAAGACCTACAGCTGTGTTTCTTATTCTCTCTTGAACCAGGGAGAGTGAGGGGAGAGATTAAGGTAATTTATAGTTG

Coding sequence (CDS)

ATGGCGAGCTTCGTTTCTTTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGGAAATCCCACCATGGAAATTGGCTAAAGCTACGGTAGTTTCAAGGCGAGCTGGAACAGCTTCGAAGCTTGTGCTACCCTGTTATTCAAAGAAATCCATATCTATGAATTGGGAAAACTTTCGATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTCCAGGAATATGGTATTATTAACTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAA

Protein sequence

MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSVRLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT

Homology

[Close]

BLAST of Pay0009595 vs. ExPASy TrEMBL
Match: A0A5A7U1B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00850 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.2e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of Pay0009595 vs. ExPASy TrEMBL
Match: A0A5D3CPK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00650 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-52
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTA KLVLPCYSKKSISMNWENFRSV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTALKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of Pay0009595 vs. ExPASy TrEMBL
Match: A0A0A0LJQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030030 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.2e-49
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQLTLKEIPP KLAKAT+VSRRAGTASKLVLP YSKKSIS+NWENF+SV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATLVSRRAGTASKLVLPWYSKKSISINWENFQSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of Pay0009595 vs. ExPASy TrEMBL
Match: A0A6J1K9Q0 (uncharacterized protein LOC111493548 OS=Cucurbita maxima OX=3661 GN=LOC111493548 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.6e-41
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQ+  KE+PPWKLAK TVV RRAGTASK VL C S KSISMNWEN + V
Sbjct: 1   MASFVSLSFSVPQVIFKEMPPWKLAKVTVVPRRAGTASKPVLSCCSNKSISMNWENCQPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRN+V L GYWVGPDVDDGWGYIEA +DRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNLV-LAGYWVGPDVDDGWGYIEALVDRIT 104

[Close]

BLAST of Pay0009595 vs. ExPASy TrEMBL
Match: A0A6J1G3X3 (uncharacterized protein LOC111450562 OS=Cucurbita moschata OX=3662 GN=LOC111450562 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.0e-40
Identity = 86/105 (81.90%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQ+  KE+PPWKLAK TVV RRAGTASK VL C + KSIS NWEN   V
Sbjct: 1   MASFVSLSFSVPQVIFKEMPPWKLAKVTVVPRRAGTASKFVLSCCTNKSIS-NWENCHPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRN+V L GYWVGPDVDDGWGYIEAF+DRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT 103

[Close]

BLAST of Pay0009595 vs. NCBI nr
Match: KAA0048017.1 (hypothetical protein E6C27_scaffold385G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 8.6e-53
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of Pay0009595 vs. NCBI nr
Match: TYK13803.1 (hypothetical protein E5676_scaffold488G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 214.5 bits (545), Expect = 4.3e-52
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTA KLVLPCYSKKSISMNWENFRSV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTALKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of Pay0009595 vs. NCBI nr
Match: KGN60942.1 (hypothetical protein Csa_021351 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQLTLKEIPP KLAKAT+VSRRAGTASKLVLP YSKKSIS+NWENF+SV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATLVSRRAGTASKLVLPWYSKKSISINWENFQSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of Pay0009595 vs. NCBI nr
Match: XP_023545344.1 (uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-41
Identity = 87/105 (82.86%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQ+  KE+PPWKLAK TVV RRAGTAS  VL C S KSISMNWEN   V
Sbjct: 1   MASFVSLSFSVPQVIFKEMPPWKLAKVTVVPRRAGTASTFVLSCCSNKSISMNWENCHPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRN+V L GYWVGPDVDDGWGYIEAF+DRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNLV-LAGYWVGPDVDDGWGYIEAFVDRIT 104

[Close]

BLAST of Pay0009595 vs. NCBI nr
Match: XP_022999037.1 (uncharacterized protein LOC111493548 [Cucurbita maxima])

HSP 1 Score: 177.2 bits (448), Expect = 7.5e-41
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60
           MASFVSLSFSVPQ+  KE+PPWKLAK TVV RRAGTASK VL C S KSISMNWEN + V
Sbjct: 1   MASFVSLSFSVPQVIFKEMPPWKLAKVTVVPRRAGTASKPVLSCCSNKSISMNWENCQPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 106
           RLTSRPFWGIVSSSSRN+V L GYWVGPDVDDGWGYIEA +DRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNLV-LAGYWVGPDVDDGWGYIEALVDRIT 104

The following BLAST results are available for this feature:

BLAST of Pay0009595 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0009595 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U1B8	4.2e-53	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CPK7	2.1e-52	99.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LJQ7	6.2e-49	95.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030030 PE=4 SV=1	[more]
A0A6J1K9Q0	3.6e-41	82.86	uncharacterized protein LOC111493548 OS=Cucurbita maxima OX=3661 GN=LOC111493548...	[more]
A0A6J1G3X3	9.0e-40	81.90	uncharacterized protein LOC111450562 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]

BLAST of Pay0009595 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048017.1	8.6e-53	100.00	hypothetical protein E6C27_scaffold385G00850 [Cucumis melo var. makuwa]	[more]
TYK13803.1	4.3e-52	99.05	hypothetical protein E5676_scaffold488G00650 [Cucumis melo var. makuwa]	[more]
KGN60942.1	1.3e-48	95.24	hypothetical protein Csa_021351 [Cucumis sativus]	[more]
XP_023545344.1	4.4e-41	82.86	uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022999037.1	7.5e-41	82.86	uncharacterized protein LOC111493548 [Cucurbita maxima]	[more]

BLAST of Pay0009595 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009595.1	Pay0009595.1	mRNA