Pay0009396 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009396
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Clavata3/esr-related 43, putative
Location	chr10: 1717123 .. 1717937 (+)
RNA-Seq Expression	Pay0009396
Synteny	Pay0009396

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGCCATTGTCGACTCTCTTTCTCTCTTCTCTCTGAGTCCCATTATAGCCGTCTTTTCCTTTGCTCTTATATCTCTAACCTAAGCCTCAAATCCATTTCAACGCACTAACAATTTCTTTCCTCTCTATTTTTTCCAAACTCAATTTACTATGACATTCATACATGCCGACCACCCACATACACCACGGATTTGAGTGTTCTTGAAATATTTCAAGTTTCAAATTCTTTTTTTATTTTTTTTATTTTTATTGTGGGTTTTTCTTCCGGCCGCCGGCAAGCCACCATGTTCAACAGAAGAATCGCCACTTCCTCCTCCTCTTCCTCCACCTCTGCTTTTGCTATACTAATTTTGATCCTCTGGGTGTCACAGATTTGGGTTTGTTGTCACTGTCAAGCTAGAGCATCACGGATTTTTCCTCCTCCTCCTCCTCCGCCGCCGTCCCCACCGCATACGACGGATAAATCACTCCCTGGTGAAGAAAAAGACAACGCCAAAAATGAACTTCTCCAAAAATACTTCAACAGCAGAGCCTTCGATCGTCACCATCACCGCCATGATGAAGGATTTGAAGACAGCAAACGGAAAATCCCCAGTTGTCCAGATCCTCTTCATAATTAGTAGGATTAATTATTCAATTTTACACTCTTTCCCGTCCAAAATACCCCCGTTTTTCTCTTCAATTTTTTCTTCTTTTCTCTTTGTTAAACACGCGTTTGTCTATGATTCAATAGAGAAAACCGGGGTTATTTTGGTACTTCACTTCACTTTGTTATATATGAAATCATAAATTCCTTCTCTTTAATTCATTCCAG

mRNA sequence

GTGGGCCATTGTCGACTCTCTTTCTCTCTTCTCTCTGAGTCCCATTATAGCCGTCTTTTCCTTTGCTCTTATATCTCTAACCTAAGCCTCAAATCCATTTCAACGCACTAACAATTTCTTTCCTCTCTATTTTTTCCAAACTCAATTTACTATGACATTCATACATGCCGACCACCCACATACACCACGGATTTGAGTGTTCTTGAAATATTTCAAGTTTCAAATTCTTTTTTTATTTTTTTTATTTTTATTGTGGGTTTTTCTTCCGGCCGCCGGCAAGCCACCATGTTCAACAGAAGAATCGCCACTTCCTCCTCCTCTTCCTCCACCTCTGCTTTTGCTATACTAATTTTGATCCTCTGGGTGTCACAGATTTGGGTTTGTTGTCACTGTCAAGCTAGAGCATCACGGATTTTTCCTCCTCCTCCTCCTCCGCCGCCGTCCCCACCGCATACGACGGATAAATCACTCCCTGGTGAAGAAAAAGACAACGCCAAAAATGAACTTCTCCAAAAATACTTCAACAGCAGAGCCTTCGATCGTCACCATCACCGCCATGATGAAGGATTTGAAGACAGCAAACGGAAAATCCCCAGTTGTCCAGATCCTCTTCATAATTAGTAGGATTAATTATTCAATTTTACACTCTTTCCCGTCCAAAATACCCCCGTTTTTCTCTTCAATTTTTTCTTCTTTTCTCTTTGTTAAACACGCGTTTGTCTATGATTCAATAGAGAAAACCGGGGTTATTTTGGTACTTCACTTCACTTTGTTATATATGAAATCATAAATTCCTTCTCTTTAATTCATTCCAG

Coding sequence (CDS)

ATGTTCAACAGAAGAATCGCCACTTCCTCCTCCTCTTCCTCCACCTCTGCTTTTGCTATACTAATTTTGATCCTCTGGGTGTCACAGATTTGGGTTTGTTGTCACTGTCAAGCTAGAGCATCACGGATTTTTCCTCCTCCTCCTCCTCCGCCGCCGTCCCCACCGCATACGACGGATAAATCACTCCCTGGTGAAGAAAAAGACAACGCCAAAAATGAACTTCTCCAAAAATACTTCAACAGCAGAGCCTTCGATCGTCACCATCACCGCCATGATGAAGGATTTGAAGACAGCAAACGGAAAATCCCCAGTTGTCCAGATCCTCTTCATAATTAG

Protein sequence

MFNRRIATSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDKSLPGEEKDNAKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN

Homology

[Close]

BLAST of Pay0009396 vs. ExPASy TrEMBL
Match: A0A0A0KR66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609690 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.5e-48
Identity = 101/111 (90.99%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MFNRRIATSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDK 60
           MFNRRI TSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPP  PPH  DK
Sbjct: 1   MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPP--PPHPADK 60

Query: 61  SLPGEEKDNAKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
           SL GEEKDNAKN+LLQKYFN RAFDR  HRHDEGFEDSKRKIPSCPDPLHN
Sbjct: 61  SLSGEEKDNAKNDLLQKYFNGRAFDR--HRHDEGFEDSKRKIPSCPDPLHN 107

[Close]

BLAST of Pay0009396 vs. ExPASy TrEMBL
Match: A0A6J1DAV9 (uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018633 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.4e-21
Identity = 66/109 (60.55%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 1   MFNRRIATSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDK 60
           M  RRIA  + SSS S+FAILILILWVSQIWVCCHCQARASRI PPP             
Sbjct: 1   MCTRRIA--AVSSSASSFAILILILWVSQIWVCCHCQARASRILPPP------------- 60

Query: 61  SLPGEEKDNA--KNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPD 108
            L G+ K +A  KNEL+QKY   RA DRH     EGFEDSKR++PSC D
Sbjct: 61  -LTGDAKHDASGKNELVQKYLRGRASDRH-----EGFEDSKRRVPSCSD 88

[Close]

BLAST of Pay0009396 vs. ExPASy TrEMBL
Match: A0A061E6F8 (Clavata3/esr-related 43, putative OS=Theobroma cacao OX=3641 GN=TCM_009879 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-10
Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 10  SSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDKSLPGEEKDN 69
           SS     +  +++LI++  QIWVCC C+A A RI      P       T+    G + + 
Sbjct: 7   SSRKLLYSSVVVLLIIFFLQIWVCCDCRAGAIRIL-----PGNGMRKMTESQ--GMKDNK 66

Query: 70  AKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
            K +L QKYFN R+F    ++ D GFE+SKR++PSCPDPLHN
Sbjct: 67  GKGDLFQKYFNGRSFS--FNKTDRGFEESKRRVPSCPDPLHN 99

[Close]

BLAST of Pay0009396 vs. ExPASy TrEMBL
Match: A0A2N9G6I6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22693 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-10
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 20  ILILILWVSQIWVCCH--CQARASRIFPPPPPPPPSPPHTTDKSLPGEEKDNAKNELLQK 79
           +++LI+ V QIW+CC   CQARA RIFP           + DK +       +K EL  K
Sbjct: 6   VVLLIMSVFQIWLCCEYSCQARAIRIFPGNGVAKFIKEKSIDKKI-------SKEELFHK 65

Query: 80  YFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
           YF+ R F  ++   D GF++SKR++PSCPDPLHN
Sbjct: 66  YFSGRTFSLNNKTDDNGFDESKRRVPSCPDPLHN 92

[Close]

BLAST of Pay0009396 vs. ExPASy TrEMBL
Match: A0A067GNI3 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046114mg PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.8e-10
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 4   RRIATSSSSSSTS-AFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDKS- 63
           +RI  SSSSSS S   A+L++I+ V QIWVC  CQ  A RIF        S P+  +K  
Sbjct: 9   KRIVYSSSSSSFSMVAAMLMIIMLVLQIWVCRDCQVGAIRIF--------STPNEVEKQQ 68

Query: 64  -LPGEEKDNAKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
            +    K   + +L++KYF   AF  +  R ++G  D KR++PSCPDPLHN
Sbjct: 69  MVTKNNKSYKEGDLVRKYFGGSAF--NFSRTEKGIADDKRRVPSCPDPLHN 109

[Close]

BLAST of Pay0009396 vs. NCBI nr
Match: KGN52083.1 (hypothetical protein Csa_008231 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47
Identity = 101/111 (90.99%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MFNRRIATSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDK 60
           MFNRRI TSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPP  PPH  DK
Sbjct: 1   MFNRRITTSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPP--PPHPADK 60

Query: 61  SLPGEEKDNAKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
           SL GEEKDNAKN+LLQKYFN RAFDR  HRHDEGFEDSKRKIPSCPDPLHN
Sbjct: 61  SLSGEEKDNAKNDLLQKYFNGRAFDR--HRHDEGFEDSKRKIPSCPDPLHN 107

[Close]

BLAST of Pay0009396 vs. NCBI nr
Match: KAG7032076.1 (CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 79/115 (68.70%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MFNRRIATSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDK 60
           M  RRIATSSSSS    FA+LI ILWVSQIWVC HCQARASRIFPPP      PPHT D 
Sbjct: 1   MCTRRIATSSSSS----FALLIFILWVSQIWVCSHCQARASRIFPPP------PPHTADT 60

Query: 61  SLPGEEK----DNAKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
           +L G++K     NA+ ELL+KYF  +AFDR  HR DEGFEDSKR+IPSCPDPLHN
Sbjct: 61  TLTGDQKYNANANAERELLRKYFKGKAFDR--HRRDEGFEDSKRRIPSCPDPLHN 103

[Close]

BLAST of Pay0009396 vs. NCBI nr
Match: KAG6601288.1 (CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 79/115 (68.70%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MFNRRIATSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDK 60
           M  RRIATSSSSS    FA+LI ILWVSQIWVC HCQARASRIFPPP      PPHT D 
Sbjct: 12  MCTRRIATSSSSS----FALLIFILWVSQIWVCSHCQARASRIFPPP------PPHTADT 71

Query: 61  SLPGEEK----DNAKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
           +L G++K     NA+ ELL+KYF  +AFDR  HR DEGFEDSKR+IPSCPDPLHN
Sbjct: 72  TLTGDQKYNANANAERELLRKYFKGKAFDR--HRRDEGFEDSKRRIPSCPDPLHN 114

[Close]

BLAST of Pay0009396 vs. NCBI nr
Match: KAG6573960.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135.2 bits (339), Expect = 3.5e-28
Identity = 80/112 (71.43%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 1   MFNRRIATSSSSSSTSAFAILILILWVSQIWV-CCHCQARASRIFPPPPPPPPSPPHTTD 60
           M  RRIA SSS      FAILILILWVSQIWV CC  QARASRIFPPPPPPPP PPHTTD
Sbjct: 1   MCTRRIAASSS------FAILILILWVSQIWVFCCFSQARASRIFPPPPPPPP-PPHTTD 60

Query: 61  KSLPGEEKDNAKNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
           K+    +  N + ELLQKYF  RAF    HRH EGF DSKRKIPSCPDPLHN
Sbjct: 61  KT----DHANRRYELLQKYFKDRAF-LDPHRHHEGFVDSKRKIPSCPDPLHN 100

[Close]

BLAST of Pay0009396 vs. NCBI nr
Match: XP_022150497.1 (uncharacterized protein LOC111018633 [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 9.2e-21
Identity = 66/109 (60.55%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 1   MFNRRIATSSSSSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDK 60
           M  RRIA  + SSS S+FAILILILWVSQIWVCCHCQARASRI PPP             
Sbjct: 1   MCTRRIA--AVSSSASSFAILILILWVSQIWVCCHCQARASRILPPP------------- 60

Query: 61  SLPGEEKDNA--KNELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPD 108
            L G+ K +A  KNEL+QKY   RA DRH     EGFEDSKR++PSC D
Sbjct: 61  -LTGDAKHDASGKNELVQKYLRGRASDRH-----EGFEDSKRRVPSCSD 88

[Close]

BLAST of Pay0009396 vs. TAIR 10
Match: AT3G25905.1 (CLAVATA3/ESR-RELATED 27 )

HSP 1 Score: 43.1 bits (100), Expect = 1.7e-04
Identity = 31/100 (31.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 12  SSSTSAFAILILILWVSQIWVCCHCQARASRIFPPPPPPPPSPPHTTDKSLPGEEKDNAK 71
           SS T+   ++IL+ ++  ++ C + +  A RIFP  P               G+ ++   
Sbjct: 9   SSLTTTLLMVILLSYMLHLF-CVYSRVGAIRIFPETP-------------ASGKRQE--- 68

Query: 72  NELLQKYFNSRAFDRHHHRHDEGFEDSKRKIPSCPDPLHN 112
            +L++KYF +  F        +G  +SKR +PSCPDPLHN
Sbjct: 69  EDLMKKYFGAGKFPPVDSFVGKGISESKRIVPSCPDPLHN 91

The following BLAST results are available for this feature:

BLAST of Pay0009396 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0009396 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR66	9.5e-48	90.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609690 PE=4 SV=1	[more]
A0A6J1DAV9	4.4e-21	60.55	uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A061E6F8	3.5e-10	42.16	Clavata3/esr-related 43, putative OS=Theobroma cacao OX=3641 GN=TCM_009879 PE=4 ...	[more]
A0A2N9G6I6	3.5e-10	44.68	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22693 PE=4 SV=1	[more]
A0A067GNI3	7.8e-10	43.24	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046114mg PE=4 SV=1	[more]

BLAST of Pay0009396 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52083.1	2.0e-47	90.99	hypothetical protein Csa_008231 [Cucumis sativus]	[more]
KAG7032076.1	1.3e-30	68.70	CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6601288.1	1.3e-30	68.70	CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG6573960.1	3.5e-28	71.43	CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022150497.1	9.2e-21	60.55	uncharacterized protein LOC111018633 [Momordica charantia]	[more]

BLAST of Pay0009396 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25905.1	1.7e-04	31.00	CLAVATA3/ESR-RELATED 27	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..111
IPR040274	CLAVATA3/ESR (CLE)-related protein 27/43	PANTHER	PTHR37184	CLAVATA3/ESR (CLE)-RELATED PROTEIN 27	coord: 5..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009396.1	Pay0009396.1	mRNA