Pay0009376 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009376
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ATP synthase subunit b
Location	chr03: 25937936 .. 25939481 (-)
RNA-Seq Expression	Pay0009376
Synteny	Pay0009376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAGAGAGGAATAGTGTAGGCCTTCTCACAGGATTTGCCTTGAATAATATATAAAAGGAGAAACAGAAATTTGTACCTTGGAACTTGGAAGTGTTAGCCGTTTAAGTCAGTACCTTACCTTTATTTGTTTTCATACTAAGTTCTTTCTCTGTTGGATCCATCTATTCAACATGTTATTTATGCATCATATTTGTTTTATTAGGAAAGATAATATAAAACACAATGGTGTGTTTTATTAGGAAGAAAGGTAATTTCATACAAGAAGGCTAAAAAATAGTTGACAGCTGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTAAATCTGGCGCCTTAGACCACTCGGCCAAACTGTCGGAATTGTGAGTTGAATAACTAAGATGATTGGAAATGTGACGAAATAAATTGGGCTATAGAAAAGAAAAGCCCAAACAATGAAGAACAATTCGGCCCACTTAATTTCACGCGCATGGCACGTGTGAAGAAATCCCAATCTGTTCTACTAGGTGGTGGTGGTGGCGAGGCGAAGCAAAGCAAAGCAAGATCAGCCTTATCAAATTGTGTGGTGAAGAATGAAGATTGTATAATGTAGATAGAAAAAGATCCCCCCATTCCCATTCCCATTCCCTTTTCTGGATCCGCCATTGTTATCTCTCTCAGACCTCCATAACCTCCATTTCTACCCAGCCATGGCGAACGTTATCATGGCCTCTTCCAAACCCCCCTCCCCTCCTCTTTCCATCTCCAACAAAACCCCCAAATTCTCCATCCCTAAAACCCTAACCCTAATCCCACAATTCCTCAAAAACCCCCAATCCATCTCCCTCTCCACCTCCACTCTCAAATCCCTCTCCCTCTTCGCCGCCACATCTCTCTCCTTCGCTCCCCCTTCCCTCGCTGAAGAGATCGAAAAGGCCGCTCTCTTCGACTTCAACCTCACTCTCCCTATCATGATGGCTCAATTCCTCCTCCTCATGGTCGGGCTCGACAAAATCTACTTCTCCCCACTCGGAAAATTCATGGATGAAAGAGACGCCGCCATTAAAGAGAAGCTGAGTAGCGTTAAAGACACCTCCGAGGGGGTCAAGCAGCTGGACGAACAAGCTGCCGCTGTCATGAGGGCTGCTAGAGCGGAGATTTCGGCGGCGCTTAATAAGATGAAGAAGGAAACTCAAGCGGAGGTGGAGGAGAAACTGGCGGAGGGGAGAAAGAGAATTGATGCGGAGTTGCAGGAAGCATTGGCGAATTTGGAGAATCAGAAAGCGGAAACCATTAAATCGCTTGATGCTCAAATTGCTGCTCTTAGTGATGAGATCGTCAAGAAGGTTCTTCCCGTTTAAATCAATTCCTGTTCTGTCCTTAGGTTTCTAATGGGCTTTTACCATCGATCGATTATTATATGGGTTTCGATCTGATTTGATTTCTACTTTTATATTTTTTCCTTGTAATCATAATGAACCAACAAATTCAATGTATAAAACAATTAAACATCGTTTTTTCCTTCTATTTTGTAATTCTAATGTATTATAACTTTTCATTCC

mRNA sequence

AAATTAGAGAGGAATAGTGTAGGCCTTCTCACAGGATTTGCCTTGAATAATATATAAAAGGAGAAACAGAAATTTGTACCTTGGAACTTGGAAGTGTTAGCCGTTTAAGTCAGTACCTTACCTTTATTTGTTTTCATACTAAGTTCTTTCTCTGTTGGATCCATCTATTCAACATGTTATTTATGCATCATATTTGTTTTATTAGGAAAGATAATATAAAACACAATGGTGTGTTTTATTAGGAAGAAAGGTAATTTCATACAAGAAGGCTAAAAAATAGTTGACAGCTGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTAAATCTGGCGCCTTAGACCACTCGGCCAAACTGTCGGAATTGTGAGTTGAATAACTAAGATGATTGGAAATGTGACGAAATAAATTGGGCTATAGAAAAGAAAAGCCCAAACAATGAAGAACAATTCGGCCCACTTAATTTCACGCGCATGGCACGTGTGAAGAAATCCCAATCTGTTCTACTAGGTGGTGGTGGTGGCGAGGCGAAGCAAAGCAAAGCAAGATCAGCCTTATCAAATTGTGTGGTGAAGAATGAAGATTGTATAATGTAGATAGAAAAAGATCCCCCCATTCCCATTCCCATTCCCTTTTCTGGATCCGCCATTGTTATCTCTCTCAGACCTCCATAACCTCCATTTCTACCCAGCCATGGCGAACGTTATCATGGCCTCTTCCAAACCCCCCTCCCCTCCTCTTTCCATCTCCAACAAAACCCCCAAATTCTCCATCCCTAAAACCCTAACCCTAATCCCACAATTCCTCAAAAACCCCCAATCCATCTCCCTCTCCACCTCCACTCTCAAATCCCTCTCCCTCTTCGCCGCCACATCTCTCTCCTTCGCTCCCCCTTCCCTCGCTGAAGAGATCGAAAAGGCCGCTCTCTTCGACTTCAACCTCACTCTCCCTATCATGATGGCTCAATTCCTCCTCCTCATGGTCGGGCTCGACAAAATCTACTTCTCCCCACTCGGAAAATTCATGGATGAAAGAGACGCCGCCATTAAAGAGAAGCTGAGTAGCGTTAAAGACACCTCCGAGGGGGTCAAGCAGCTGGACGAACAAGCTGCCGCTGTCATGAGGGCTGCTAGAGCGGAGATTTCGGCGGCGCTTAATAAGATGAAGAAGGAAACTCAAGCGGAGGTGGAGGAGAAACTGGCGGAGGGGAGAAAGAGAATTGATGCGGAGTTGCAGGAAGCATTGGCGAATTTGGAGAATCAGAAAGCGGAAACCATTAAATCGCTTGATGCTCAAATTGCTGCTCTTAGTGATGAGATCGTCAAGAAGGTTCTTCCCGTTTAAATCAATTCCTGTTCTGTCCTTAGGTTTCTAATGGGCTTTTACCATCGATCGATTATTATATGGGTTTCGATCTGATTTGATTTCTACTTTTATATTTTTTCCTTGTAATCATAATGAACCAACAAATTCAATGTATAAAACAATTAAACATCGTTTTTTCCTTCTATTTTGTAATTCTAATGTATTATAACTTTTCATTCC

Coding sequence (CDS)

ATGGCGAACGTTATCATGGCCTCTTCCAAACCCCCCTCCCCTCCTCTTTCCATCTCCAACAAAACCCCCAAATTCTCCATCCCTAAAACCCTAACCCTAATCCCACAATTCCTCAAAAACCCCCAATCCATCTCCCTCTCCACCTCCACTCTCAAATCCCTCTCCCTCTTCGCCGCCACATCTCTCTCCTTCGCTCCCCCTTCCCTCGCTGAAGAGATCGAAAAGGCCGCTCTCTTCGACTTCAACCTCACTCTCCCTATCATGATGGCTCAATTCCTCCTCCTCATGGTCGGGCTCGACAAAATCTACTTCTCCCCACTCGGAAAATTCATGGATGAAAGAGACGCCGCCATTAAAGAGAAGCTGAGTAGCGTTAAAGACACCTCCGAGGGGGTCAAGCAGCTGGACGAACAAGCTGCCGCTGTCATGAGGGCTGCTAGAGCGGAGATTTCGGCGGCGCTTAATAAGATGAAGAAGGAAACTCAAGCGGAGGTGGAGGAGAAACTGGCGGAGGGGAGAAAGAGAATTGATGCGGAGTTGCAGGAAGCATTGGCGAATTTGGAGAATCAGAAAGCGGAAACCATTAAATCGCTTGATGCTCAAATTGCTGCTCTTAGTGATGAGATCGTCAAGAAGGTTCTTCCCGTTTAA

Protein sequence

MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAELQEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV

Homology

[Close]

BLAST of Pay0009376 vs. ExPASy Swiss-Prot
Match: P31853 (ATP synthase subunit b', chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPF2 PE=1 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57
Identity = 147/223 (65.92%), Postives = 173/223 (77.58%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKT--PKFSIPKT--LTLIPQFLKNPQSISLSTSTLKSLSL 60
           MAN+++ASS    P  + +  T  PKF + KT  L L P  L  P    L+ S LKS ++
Sbjct: 1   MANMLVASSSKTLPTTTTTTITPKPKFPLLKTPLLKLSPPQL--PPLKHLNLSVLKSAAI 60

Query: 61  FAA-TSLSF--APPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDE 120
            A   +LSF    PSLAEEIEKA+LFDFNLTLPI+MA+FL LM  LDKIY++PLG FMD+
Sbjct: 61  TATPLTLSFLLPYPSLAEEIEKASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDK 120

Query: 121 RDAAIKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGR 180
           RDA+IKE+LS VKDTS  VKQL+EQA AVMRAARAEISAALNKMKKETQ EVE KLAEGR
Sbjct: 121 RDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARAEISAALNKMKKETQLEVEAKLAEGR 180

Query: 181 KRIDAELQEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           K+I+ ELQEAL +LE QK +TIKSLD+QI+ALSD+IVKKVLPV
Sbjct: 181 KKIEVELQEALGSLEQQKEDTIKSLDSQISALSDDIVKKVLPV 221

[Close]

BLAST of Pay0009376 vs. ExPASy Swiss-Prot
Match: A8J785 (ATP synthase subunit b', chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=ATPF2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.0e-26
Identity = 69/163 (42.33%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 53  SLSLFAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMD 112
           +LS   A +L   P +     E   +FDFNLTLP+M  +FLLLMV L+K +F+P+GK +D
Sbjct: 46  ALSAIVANALMAMPAA----AEAGKIFDFNLTLPVMAGEFLLLMVFLEKTWFTPVGKVLD 105

Query: 113 ERDAAIKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEG 172
           ERD  I+ KL SVKD +  V +L  +A  ++++AR+++SA +N  K   Q+E+++   E 
Sbjct: 106 ERDNLIRSKLGSVKDNTGDVDKLVLEAETILKSARSDVSAMINTKKAAKQSELDKTYNEA 165

Query: 173 RKRIDAELQEALANLENQKAETIKSLDAQIAALSDEIVKKVLP 216
           + +I AE++ ++A LE + A  +KSLDAQ+  +S E++K+VLP
Sbjct: 166 KAKITAEVESSIAGLEQESASMLKSLDAQVDKISAEVLKRVLP 204

[Close]

BLAST of Pay0009376 vs. ExPASy Swiss-Prot
Match: P48085 (ATP synthase B' chain, cyanelle OS=Cyanophora paradoxa OX=2762 GN=atpF2 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.9e-15
Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 0


Query: 69  LAEEIEKA----ALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKEKLSS 128
           LA E E A     LFDF+ TLP+MM Q L+LM+ L+ +++ PL K +DER   I+   + 
Sbjct: 8   LAIETEAAKPEGGLFDFDATLPVMMVQLLVLMLILNAVFYKPLIKILDERKEYIQSNFNE 67

Query: 129 VKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAELQEAL 188
            +       +L  Q    +  AR   S   N  + E Q  V EKL E +K+ D+EL  A 
Sbjct: 68  AEKCLAQAAELTTQYETKITDARQNASKLTNTTRSEIQRFVSEKLEEAQKKADSELASAT 127

Query: 189 ANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
             LE QK E +KSL++++  LS +I++K+L +
Sbjct: 128 NKLELQKDEALKSLESEVQTLSTKILEKLLGI 159

[Close]

BLAST of Pay0009376 vs. ExPASy Swiss-Prot
Match: Q05367 (ATP synthase subunit b' OS=Synechococcus sp. (strain PCC 6716) OX=32048 GN=atpF2 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.8e-14
Identity = 47/148 (31.76%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 67  PSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKEKLSSVK 126
           P L   I +  +FDF+ TLP+M  QFL+L V L+ + + PLG+ +D RD  I+  L   K
Sbjct: 11  PLLFRPILERLMFDFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAK 70

Query: 127 DTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAELQEALAN 186
           +  +   +L  Q    +   R E  A + + + E Q     ++A  ++ + AEL +A A 
Sbjct: 71  ERLQQATELANQYEQELAYTRREAQAIIEEARAEAQKIATAEIAAAQQALQAELMKAQAE 130

Query: 187 LENQKAETIKSLDAQIAALSDEIVKKVL 215
           ++ QK  T+++L+ Q+++LS++++ K+L
Sbjct: 131 IDQQKQATLQALEGQVSSLSEQLLAKLL 158

[Close]

BLAST of Pay0009376 vs. ExPASy Swiss-Prot
Match: Q8DLP6 (ATP synthase subunit b' OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=atpF2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 43/137 (31.39%), Postives = 83/137 (60.58%), Query Frame = 0


Query: 78  LFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEGVKQLDE 137
           +FDF+ TLP+M  QFL+L V L+ + + PLG+ +D RD  I+  L   K+  +   +L +
Sbjct: 1   MFDFDATLPLMAVQFLILTVILNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELAQ 60

Query: 138 QAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAELQEALANLENQKAETIKS 197
           Q    + + R +  A + + + E Q     ++AE ++ + AEL +  A ++ QK  T+++
Sbjct: 61  QYEQELASTRRQAQALIEEARVEAQKIATAEIAEAQQAVQAELLKIQAEIDQQKQATLQA 120

Query: 198 LDAQIAALSDEIVKKVL 215
           L+ Q+A+LS++++ K++
Sbjct: 121 LEGQVASLSEQLLAKLM 137

[Close]

BLAST of Pay0009376 vs. ExPASy TrEMBL
Match: A0A5A7VF07 (ATP synthase subunit b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002340 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.5e-101
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60
           MANVIMASSKP SPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT
Sbjct: 48  MANVIMASSKPLSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 107

Query: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120
           SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE
Sbjct: 108 SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 167

Query: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180
           KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL
Sbjct: 168 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 227

Query: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 228 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 263

[Close]

BLAST of Pay0009376 vs. ExPASy TrEMBL
Match: A0A1S3BD20 (ATP synthase subunit b', chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488320 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.5e-101
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60
           MANVIMASSKP SPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT
Sbjct: 1   MANVIMASSKPLSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60

Query: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120
           SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE
Sbjct: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120

Query: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180
           KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL
Sbjct: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180

Query: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 216

[Close]

BLAST of Pay0009376 vs. ExPASy TrEMBL
Match: A0A0A0LM10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381850 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60
           MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLK PQSISLSTSTLKSLSLFAAT
Sbjct: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKKPQSISLSTSTLKSLSLFAAT 60

Query: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120
           SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDK+YFSPLGKFMDERD AIKE
Sbjct: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDTAIKE 120

Query: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180
           KL+SVKDTSE VKQLD+QAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKRID EL
Sbjct: 121 KLNSVKDTSEEVKQLDDQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKRIDVEL 180

Query: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           QEALANLENQKAETIKSLDAQIAALSD+IVKKVLPV
Sbjct: 181 QEALANLENQKAETIKSLDAQIAALSDDIVKKVLPV 216

[Close]

BLAST of Pay0009376 vs. ExPASy TrEMBL
Match: A0A6J1GIS7 (ATP synthase subunit b', chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454265 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.7e-90
Identity = 200/219 (91.32%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSI-SNKTPKFSIPK--TLTLIPQFLKNPQSISLSTSTLKSLSLF 60
           MANVIMASSKP SPP SI S KTPKFSIPK  TLTL P  LKNPQ +SLST+TLKSLSL 
Sbjct: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDK+YFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120

Query: 121 IKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRID 180
           IKEKL+SVKDTSE VKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRK+ID
Sbjct: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKKID 180

Query: 181 AELQEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           AELQEALA+LENQK ETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 AELQEALASLENQKVETIKSLDAQIAALSDEIVKKVLPV 219

[Close]

BLAST of Pay0009376 vs. ExPASy TrEMBL
Match: A0A6J1KTQ2 (ATP synthase subunit b', chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111496318 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.3e-89
Identity = 200/219 (91.32%), Postives = 205/219 (93.61%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSI-SNKTPKFSIPK--TLTLIPQFLKNPQSISLSTSTLKSLSLF 60
           MANVIMASSKP S P SI S KTPKFSIPK  TLTL P  LKNPQ +SLSTSTLKSLSL 
Sbjct: 1   MANVIMASSKPLSAPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFLSLSTSTLKSLSLI 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDK+YFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120

Query: 121 IKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRID 180
           IKEKL+SVKDTSE VKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRK+ID
Sbjct: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKKID 180

Query: 181 AELQEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           AELQEALA+LENQK ETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 AELQEALASLENQKVETIKSLDAQIAALSDEIVKKVLPV 219

[Close]

BLAST of Pay0009376 vs. NCBI nr
Match: XP_008445233.1 (PREDICTED: ATP synthase subunit b', chloroplastic [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60
           MANVIMASSKP SPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT
Sbjct: 1   MANVIMASSKPLSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60

Query: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120
           SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE
Sbjct: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120

Query: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180
           KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL
Sbjct: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180

Query: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 216

[Close]

BLAST of Pay0009376 vs. NCBI nr
Match: KAA0064916.1 (ATP synthase subunit b' [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60
           MANVIMASSKP SPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT
Sbjct: 48  MANVIMASSKPLSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 107

Query: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120
           SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE
Sbjct: 108 SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 167

Query: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180
           KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL
Sbjct: 168 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 227

Query: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 228 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 263

[Close]

BLAST of Pay0009376 vs. NCBI nr
Match: XP_004138722.1 (ATP synthase subunit b', chloroplastic [Cucumis sativus] >KGN62960.1 hypothetical protein Csa_022265 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 3.1e-97
Identity = 207/216 (95.83%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60
           MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLK PQSISLSTSTLKSLSLFAAT
Sbjct: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKKPQSISLSTSTLKSLSLFAAT 60

Query: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120
           SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDK+YFSPLGKFMDERD AIKE
Sbjct: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDTAIKE 120

Query: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180
           KL+SVKDTSE VKQLD+QAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKRID EL
Sbjct: 121 KLNSVKDTSEEVKQLDDQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKRIDVEL 180

Query: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           QEALANLENQKAETIKSLDAQIAALSD+IVKKVLPV
Sbjct: 181 QEALANLENQKAETIKSLDAQIAALSDDIVKKVLPV 216

[Close]

BLAST of Pay0009376 vs. NCBI nr
Match: XP_038886736.1 (ATP synthase subunit b', chloroplastic [Benincasa hispida])

HSP 1 Score: 356.3 bits (913), Expect = 1.9e-94
Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSISNKTPKFSIPKTLTLIPQFLKNPQSISLSTSTLKSLSLFAAT 60
           MANVIMASSKP SPPLSISNKTPKFSIPKTL LIP FLK PQSISLS+STLKSLSLFAAT
Sbjct: 1   MANVIMASSKPLSPPLSISNKTPKFSIPKTLALIPSFLKKPQSISLSSSTLKSLSLFAAT 60

Query: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAAIKE 120
           SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMV LDKIYFSPLGKFMDERD+AIKE
Sbjct: 61  SLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVALDKIYFSPLGKFMDERDSAIKE 120

Query: 121 KLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRIDAEL 180
           KL+SVKDTSE VKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRK+IDAEL
Sbjct: 121 KLNSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAEL 180

Query: 181 QEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           QEALANLENQK ETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 QEALANLENQKVETIKSLDAQIAALSDEIVKKVLPV 216

[Close]

BLAST of Pay0009376 vs. NCBI nr
Match: XP_022951454.1 (ATP synthase subunit b', chloroplastic [Cucurbita moschata] >KAG7020394.1 ATP synthase subunit b', chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 200/219 (91.32%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MANVIMASSKPPSPPLSI-SNKTPKFSIPK--TLTLIPQFLKNPQSISLSTSTLKSLSLF 60
           MANVIMASSKP SPP SI S KTPKFSIPK  TLTL P  LKNPQ +SLST+TLKSLSL 
Sbjct: 1   MANVIMASSKPLSPPPSIASTKTPKFSIPKTLTLTLTPTILKNPQFVSLSTTTLKSLSLI 60

Query: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKFMDERDAA 120
           AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDK+YFSPLGKFMDERDAA
Sbjct: 61  AATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKLYFSPLGKFMDERDAA 120

Query: 121 IKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKRID 180
           IKEKL+SVKDTSE VKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRK+ID
Sbjct: 121 IKEKLNSVKDTSEEVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLAEGRKKID 180

Query: 181 AELQEALANLENQKAETIKSLDAQIAALSDEIVKKVLPV 217
           AELQEALA+LENQK ETIKSLDAQIAALSDEIVKKVLPV
Sbjct: 181 AELQEALASLENQKVETIKSLDAQIAALSDEIVKKVLPV 219

[Close]

BLAST of Pay0009376 vs. TAIR 10
Match: AT4G32260.1 (ATPase, F0 complex, subunit B/B', bacterial/chloroplast )

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-62
Identity = 147/225 (65.33%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 2   ANVIMASSKPPSPPLSISN-------KTPKFS----IPKTLTLIPQFLKNPQSISLSTST 61
           AN IMASSK   P +S+S+       + PKF+    IPK+LT         +++SLS++T
Sbjct: 3   ANSIMASSK---PLISLSSNQQPNRVQIPKFAKLPQIPKSLTSSTDL--RSKALSLSSAT 62

Query: 62  LKSLSLFAATSLSFAPPSLAEEIEKAALFDFNLTLPIMMAQFLLLMVGLDKIYFSPLGKF 121
            KSL+L AA    FAPPS+AE +EKA LFDFNLTLPI++ +FL LM  LDK+Y+SPLG F
Sbjct: 63  AKSLALIAA----FAPPSMAEAMEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSPLGNF 122

Query: 122 MDERDAAIKEKLSSVKDTSEGVKQLDEQAAAVMRAARAEISAALNKMKKETQAEVEEKLA 181
           MD+RDA+IKEKL+SVKDTS  VK+LDEQAAAVMRAARAEI+AALNKMKKETQ EVEEKLA
Sbjct: 123 MDQRDASIKEKLASVKDTSTEVKELDEQAAAVMRAARAEIAAALNKMKKETQVEVEEKLA 182

Query: 182 EGRKRIDAELQEALANLENQKAETIKSLDAQIAALSDEIVKKVLP 216
           EGRK+++ EL+EALA+LE+QK ETIK+LD+QIAALS++IVKKVLP
Sbjct: 183 EGRKKVEEELKEALASLESQKEETIKALDSQIAALSEDIVKKVLP 218

The following BLAST results are available for this feature:

BLAST of Pay0009376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31853	1.4e-57	65.92	ATP synthase subunit b', chloroplastic OS=Spinacia oleracea OX=3562 GN=ATPF2 PE=...	[more]
A8J785	5.0e-26	42.33	ATP synthase subunit b', chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=A...	[more]
P48085	8.9e-15	37.50	ATP synthase B' chain, cyanelle OS=Cyanophora paradoxa OX=2762 GN=atpF2 PE=3 SV=...	[more]
Q05367	9.8e-14	31.76	ATP synthase subunit b' OS=Synechococcus sp. (strain PCC 6716) OX=32048 GN=atpF2...	[more]
Q8DLP6	2.2e-13	31.39	ATP synthase subunit b' OS=Thermosynechococcus elongatus (strain BP-1) OX=197221...	[more]

BLAST of Pay0009376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VF07	6.5e-101	99.54	ATP synthase subunit b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8...	[more]
A0A1S3BD20	6.5e-101	99.54	ATP synthase subunit b', chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488320 P...	[more]
A0A0A0LM10	1.5e-97	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381850 PE=3 SV=1	[more]
A0A6J1GIS7	8.7e-90	91.32	ATP synthase subunit b', chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KTQ2	4.3e-89	91.32	ATP synthase subunit b', chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114963...	[more]

BLAST of Pay0009376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445233.1	1.3e-100	99.54	PREDICTED: ATP synthase subunit b', chloroplastic [Cucumis melo]	[more]
KAA0064916.1	1.3e-100	99.54	ATP synthase subunit b' [Cucumis melo var. makuwa]	[more]
XP_004138722.1	3.1e-97	95.83	ATP synthase subunit b', chloroplastic [Cucumis sativus] >KGN62960.1 hypothetica...	[more]
XP_038886736.1	1.9e-94	94.44	ATP synthase subunit b', chloroplastic [Benincasa hispida]	[more]
XP_022951454.1	1.8e-89	91.32	ATP synthase subunit b', chloroplastic [Cucurbita moschata] >KAG7020394.1 ATP sy...	[more]

BLAST of Pay0009376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32260.1	1.2e-62	65.33	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 143..204
None	No IPR available	PANTHER	PTHR33445:SF2	ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC	coord: 1..215
None	No IPR available	PANTHER	PTHR33445	ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC	coord: 1..215
None	No IPR available	CDD	cd06503	ATP-synt_Fo_b	coord: 84..214 e-value: 2.6655E-16 score: 70.5443
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	PFAM	PF00430	ATP-synt_B	coord: 84..214 e-value: 4.6E-14 score: 52.6
IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast	HAMAP	MF_01398	ATP_synth_b_bprime	coord: 79..216 score: 9.980165
IPR034679	ATP synthase, F0 complex, subunit b'	HAMAP	MF_01399	ATP_synth_bprime	coord: 78..215 score: 19.85635

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009376.1	Pay0009376.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity