Pay0009174 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009174
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr08: 9730997 .. 9732073 (+)
RNA-Seq Expression	Pay0009174
Synteny	Pay0009174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAACAAGATGAGGACATTGATAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATGTGGAAAGGAAAAGTCGTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAAATGATCCCATTTATCCTCAAGGATTCACTCCATACCACATGAATGTTCTGCAGTCTCAAACCACTCAACACTATGTTCCTATGAATCCGCTGTATGCTGTTCCACCCATTGTCCCATGTATAGAACATTTGGAAGCTCAGGCTAAAATTGAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAAAAAGGTTGCGAGCAATTGAAAGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAGTTCTTGAATTCGATAAATATGATGGATCAACGTGTCCAAGGAGTCATCTTATAATGTACCACAGAAAGATGGCGGCGCATATTAATAATAATAAATTGCTAGTACATTGCTTCCAGGATAGCTTAACTGGTCCAGCTAGTCGATGATATATTCAATTAGATAGTGCACACATTCACGTTTGGAAGGATTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCAAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGAAAAGCTTCAAAGAATATGCTCAAGGATGGAGAGATATGGCTGCCGAGGTTCAGCCATCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCTATTCTATGAGCGAATGATTGGTAATGCATCAACAATTTTTTCTGATATTACTGTTATTGGCGAAAGAATTGAATATCGAATAAAACACGGAAGGTTAGTAGAGGCTACAACTAAATATGGTGGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAAGAGAGGTTCATGCAAATGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGTAA

mRNA sequence

ATGGAAGAACAAGATGAGGACATTGATAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATGTGGAAAGGAAAAGTCGTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAAATGATCCCATTTATCCTCAAGGATTCACTCCATACCACATGAATGTTCTGCAGTCTCAAACCACTCAACACTATGTTCCTATGAATCCGCTGTATGCTGTTCCACCCATTGTCCCATGTATAGAACATTTGGAAGCTCAGGCTAAAATTGAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAAAAAGGTTGCGAGCAATTGAAAGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAGTTCTTGAATTCGATAAATATGATGGATCAACGTGTCCAAGGAGTCATCTTATAATGTACCACAGAAAGATGGCGGCGCATATTAATAATAATAAATTGCTAGTACATTGCTTCCAGGATAGCTTAACTGATAGTGCACACATTCACGTTTGGAAGGATTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCAAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGAAAAGCTTCAAAGAATATGCTCAAGGATGGAGAGATATGGCTGCCGAGGTTCAGCCATCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCTATTCTATGAGCGAATGATTGGTAATGCATCAACAATTTTTTCTGATATTACTGTTATTGGCGAAAGAATTGAATATCGAATAAAACACGGAAGGTTAGTAGAGGCTACAACTAAATATGGTGGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAAGAGAGGTTCATGCAAATGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGTAA

Coding sequence (CDS)

ATGGAAGAACAAGATGAGGACATTGATAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATGTGGAAAGGAAAAGTCGTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAAATGATCCCATTTATCCTCAAGGATTCACTCCATACCACATGAATGTTCTGCAGTCTCAAACCACTCAACACTATGTTCCTATGAATCCGCTGTATGCTGTTCCACCCATTGTCCCATGTATAGAACATTTGGAAGCTCAGGCTAAAATTGAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAAAAAGGTTGCGAGCAATTGAAAGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGCTTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAGTTCTTGAATTCGATAAATATGATGGATCAACGTGTCCAAGGAGTCATCTTATAATGTACCACAGAAAGATGGCGGCGCATATTAATAATAATAAATTGCTAGTACATTGCTTCCAGGATAGCTTAACTGATAGTGCACACATTCACGTTTGGAAGGATTTAGCTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCAAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGAAAAGCTTCAAAGAATATGCTCAAGGATGGAGAGATATGGCTGCCGAGGTTCAGCCATCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCTATTCTATGAGCGAATGATTGGTAATGCATCAACAATTTTTTCTGATATTACTGTTATTGGCGAAAGAATTGAATATCGAATAAAACACGGAAGGTTAGTAGAGGCTACAACTAAATATGGTGGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAAGAGAGGTTCATGCAAATGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGTAA

Protein sequence

MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLTDSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITVIGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

Homology

[Close]

BLAST of Pay0009174 vs. ExPASy TrEMBL
Match: A0A5A7T0H8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00180 PE=4 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.9e-171
Identity = 311/358 (86.87%), Postives = 324/358 (90.50%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI+DM QNENTPAKQKLDVLE+
Sbjct: 61  PYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HI
Sbjct: 121 RLRAIEETDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMATHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIHVWKDLADAFLKQYKHNIDMA DRLDLQR+
Sbjct: 181 NNDKLLVHCFQDSLTDPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRV 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ WRDM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Sbjct: 241 EKKSSESFKEYAQRWRDMVAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EATT+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. ExPASy TrEMBL
Match: A0A5A7T5W6 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00370 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 3.3e-171
Identity = 311/358 (86.87%), Postives = 324/358 (90.50%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKSVVDTAQSSNPIQDTDDPIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI+DM QNENTPAKQKLDVLE+
Sbjct: 61  PYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY+RKMA HI
Sbjct: 121 RLRAIEETDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYYRKMATHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIHVWKDLADAFLKQYKHNIDMA D LDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTDPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDHLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ WRDMAAEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Sbjct: 241 EKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EATT+YG IKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEATTEYGRIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. ExPASy TrEMBL
Match: A0A5A7V3W7 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002400 PE=4 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 6.8e-169
Identity = 306/358 (85.47%), Postives = 323/358 (90.22%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINN+GEQVSKILELLSM KGKV VDTTQSSNPIQDT+DPIYP  FT
Sbjct: 1   MEEKDKDMDKMRQEINNIGEQVSKILELLSMGKGKVAVDTTQSSNPIQDTDDPIYPPEFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYHMNV QSQTTQHY+P +PLY VPPIVP +EHLEAQAKI+DMGQNENT AKQKLDVLE+
Sbjct: 61  PYHMNVPQSQTTQHYIPTDPLYVVPPIVPGVEHLEAQAKIQDMGQNENTLAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAEHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIHVWKDLADAFLKQYKHNIDMA +RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ W+DM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Sbjct: 241 EKKSSESFKEYAQRWKDMTAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL E TT+YGGIKKGTISKKKE E+HA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEPTTEYGGIKKGTISKKKEGEIHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. ExPASy TrEMBL
Match: A0A5D3CXD6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003760 PE=4 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.2e-168
Identity = 308/358 (86.03%), Postives = 321/358 (89.66%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVAVDTAQSSNPIQDTDDHIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYHMNV QSQTTQHYVP NPLY VPPIVP IEHLEAQAKI+DMGQNENTPAKQKLDVLE+
Sbjct: 61  PYHMNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHIWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ WRDM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Sbjct: 241 EKKSSESFKEYAQRWRDMTVEVQPPLIDKEMTSMFMNTLRAPFYERMIGNASTNFSNIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. ExPASy TrEMBL
Match: A0A1S3CQP2 (uncharacterized protein LOC103503225 OS=Cucumis melo OX=3656 GN=LOC103503225 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.3e-167
Identity = 306/358 (85.47%), Postives = 320/358 (89.39%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVAVDTAQSSNPIQDTDDHIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYHMNV QSQT QHYVP NPLY VPPIVP IEHLEAQAKI+DMGQNENTPAKQKLDVLE+
Sbjct: 61  PYHMNVPQSQTIQHYVPTNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHIWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ W+DM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Sbjct: 241 EKKSSESFKEYAQRWKDMTVEVQPPLIDKEMTSMFMNTLRAPFYERMIGNASTNFSNIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. NCBI nr
Match: KAA0036942.1 (uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 611.7 bits (1576), Expect = 4.0e-171
Identity = 311/358 (86.87%), Postives = 324/358 (90.50%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAVVDTAQSSNPIQDTDDPIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI+DM QNENTPAKQKLDVLE+
Sbjct: 61  PYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HI
Sbjct: 121 RLRAIEETDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMATHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIHVWKDLADAFLKQYKHNIDMA DRLDLQR+
Sbjct: 181 NNDKLLVHCFQDSLTDPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDRLDLQRV 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ WRDM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Sbjct: 241 EKKSSESFKEYAQRWRDMVAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EATT+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEATTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. NCBI nr
Match: KAA0036957.1 (RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 610.9 bits (1574), Expect = 6.8e-171
Identity = 311/358 (86.87%), Postives = 324/358 (90.50%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKSVVDTAQSSNPIQDTDDPIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI+DM QNENTPAKQKLDVLE+
Sbjct: 61  PYHINVPQSQTTQHYVPTNPLYVVPPIIPGIEHLEAQAKIQDMEQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY+RKMA HI
Sbjct: 121 RLRAIEETDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYYRKMATHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIHVWKDLADAFLKQYKHNIDMA D LDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTDPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPDHLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ WRDMAAEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Sbjct: 241 EKKSSESFKEYAQRWRDMAAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EATT+YG IKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEATTEYGRIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. NCBI nr
Match: KAA0060421.1 (uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa])

HSP 1 Score: 603.2 bits (1554), Expect = 1.4e-168
Identity = 306/358 (85.47%), Postives = 323/358 (90.22%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINN+GEQVSKILELLSM KGKV VDTTQSSNPIQDT+DPIYP  FT
Sbjct: 1   MEEKDKDMDKMRQEINNIGEQVSKILELLSMGKGKVAVDTTQSSNPIQDTDDPIYPPEFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYHMNV QSQTTQHY+P +PLY VPPIVP +EHLEAQAKI+DMGQNENT AKQKLDVLE+
Sbjct: 61  PYHMNVPQSQTTQHYIPTDPLYVVPPIVPGVEHLEAQAKIQDMGQNENTLAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPGLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAEHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIHVWKDLADAFLKQYKHNIDMA +RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ W+DM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Sbjct: 241 EKKSSESFKEYAQRWKDMTAEVQPPLTDKEMTSMFMNTLRAPFYERMIGNASTNFSDIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL E TT+YGGIKKGTISKKKE E+HA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEPTTEYGGIKKGTISKKKEGEIHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. NCBI nr
Match: KAA0044913.1 (uncharacterized protein E6C27_scaffold74G002080 [Cucumis melo var. makuwa] >TYK16557.1 uncharacterized protein E5676_scaffold21G003760 [Cucumis melo var. makuwa])

HSP 1 Score: 602.4 bits (1552), Expect = 2.4e-168
Identity = 308/358 (86.03%), Postives = 321/358 (89.66%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVAVDTAQSSNPIQDTDDHIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYHMNV QSQTTQHYVP NPLY VPPIVP IEHLEAQAKI+DMGQNENTPAKQKLDVLE+
Sbjct: 61  PYHMNVPQSQTTQHYVPTNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHIWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ WRDM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Sbjct: 241 EKKSSESFKEYAQRWRDMTVEVQPPLIDKEMTSMFMNTLRAPFYERMIGNASTNFSNIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

[Close]

BLAST of Pay0009174 vs. NCBI nr
Match: XP_008465589.1 (PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo])

HSP 1 Score: 599.0 bits (1543), Expect = 2.7e-167
Identity = 306/358 (85.47%), Postives = 320/358 (89.39%), Query Frame = 0


Query: 1   MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFT 60
           MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFT
Sbjct: 1   MEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVAVDTAQSSNPIQDTDDHIYPPGFT 60

Query: 61  PYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQNENTPAKQKLDVLEK 120
           PYHMNV QSQT QHYVP NPLY VPPIVP IEHLEAQAKI+DMGQNENTPAKQKLDVLE+
Sbjct: 61  PYHMNVPQSQTIQHYVPTNPLYVVPPIVPGIEHLEAQAKIQDMGQNENTPAKQKLDVLEE 120

Query: 121 RLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHI 180
           RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHI
Sbjct: 121 RLRAIEGTDVYGNIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHI 180

Query: 181 NNNKLLVHCFQDSLT----------DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRM 240
           NN+KLLVHCFQDSLT          D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRM
Sbjct: 181 NNDKLLVHCFQDSLTGPASRWYIQLDNAHIHIWKDLADAFLKQYKHNIDMAPNRLDLQRM 240

Query: 241 EKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV 300
           EKKSS+SFKEYAQ W+DM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Sbjct: 241 EKKSSESFKEYAQRWKDMTVEVQPPLIDKEMTSMFMNTLRAPFYERMIGNASTNFSNIIV 300

Query: 301 IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE 349
           IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Sbjct: 301 IGERIEYGIKHGRLAEAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFGQRKYE 358

The following BLAST results are available for this feature:

BLAST of Pay0009174 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0009174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0H8	1.9e-171	86.87	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T5W6	3.3e-171	86.87	RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein...	[more]
A0A5A7V3W7	6.8e-169	85.47	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CXD6	1.2e-168	86.03	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CQP2	1.3e-167	85.47	uncharacterized protein LOC103503225 OS=Cucumis melo OX=3656 GN=LOC103503225 PE=...	[more]

BLAST of Pay0009174 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036942.1	4.0e-171	86.87	uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]	[more]
KAA0036957.1	6.8e-171	86.87	RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein...	[more]
KAA0060421.1	1.4e-168	85.47	uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]	[more]
KAA0044913.1	2.4e-168	86.03	uncharacterized protein E6C27_scaffold74G002080 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_008465589.1	2.7e-167	85.47	PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo]	[more]

BLAST of Pay0009174 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 211..231
None	No IPR available	COILS	Coil	Coil	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..348
None	No IPR available	PANTHER	PTHR34491:SF19	GAG-PRO-LIKE PROTEIN	coord: 4..284
None	No IPR available	PANTHER	PTHR34491	A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATED	coord: 4..284
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 191..270 e-value: 6.7E-8 score: 32.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009174.1	Pay0009174.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity