Pay0009121 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009121
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transcription termination factor MTEF1
Location	chr06: 4464332 .. 4465033 (-)
RNA-Seq Expression	Pay0009121
Synteny	Pay0009121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACACTTCGCCGTTATTCTCTGTCATGACCTCCGAAGTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAATTTATCTTCAGCAGAAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGAATGTTGACAGAGTTAGGGAAATGGGATTCAACCCTCAACGATTGCTGTTTGTTGTTGCTGTTTCTGGTCTGCAACGAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGACAAGAATAATGGTGCAATGGATTTCTTTGTCAACAAAATGGGATGCGAATCATCTTTAGCTGCTACTAGACCTCTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCAAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCCTGTTTCTTTCTCTGGGATTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCGTAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAAAGGATTCTTGA

mRNA sequence

ATGATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACACTTCGCCGTTATTCTCTGTCATGACCTCCGAAGTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAATTTATCTTCAGCAGAAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGAATGTTGACAGAGTTAGGGAAATGGGATTCAACCCTCAACGATTGCTGTTTGTTGTTGCTGTTTCTGGTCTGCAACGAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGACAAGAATAATGGTGCAATGGATTTCTTTGTCAACAAAATGGGATGCGAATCATCTTTAGCTGCTACTAGACCTCTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCAAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCCTGTTTCTTTCTCTGGGATTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCGTAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAAAGGATTCTTGA

Coding sequence (CDS)

ATGATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACACTTCGCCGTTATTCTCTGTCATGACCTCCGAAGTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAATTTATCTTCAGCAGAAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGAATGTTGACAGAGTTAGGGAAATGGGATTCAACCCTCAACGATTGCTGTTTGTTGTTGCTGTTTCTGGTCTGCAACGAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGACAAGAATAATGGTGCAATGGATTTCTTTGTCAACAAAATGGGATGCGAATCATCTTTAGCTGCTACTAGACCTCTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCAAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCCTGTTTCTTTCTCTGGGATTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCGTAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAAAGGATTCTTGA

Protein sequence

MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYVYQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS

Homology

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BLAST of Pay0009121 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.4e-04
Identity = 50/224 (22.32%), Postives = 99/224 (44.20%), Query Frame = 0


Query: 12  LGSEEKTLATI-KHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKMF-LTSS 71
           LG   + + TI + FA    + L   + P +E L  +G+P S+I   L ++P++  ++ +
Sbjct: 206 LGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLT 265

Query: 72  IRFKENVDRVREMGFNPQRLLFVVA-VSGLQRMTKSTWDKKVEVYRKWGLSEEEICLAFR 131
              K  +  +  +G +  +   +++    +   ++      VE   + GL+EE+I     
Sbjct: 266 DNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILT 325

Query: 132 RHPWCMMLS-EDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYVYQVLLSK 191
           R P  M  S EDK    M++F +     + L    P    LS++  + P   V +  L K
Sbjct: 326 RCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKP---VTEFFLEK 385

Query: 192 G--------LIKKHGNPVSFS----GIPEKRFIEKIINPRKEQI 220
           G        +I ++G   +FS     +P+  + + +  P+ E +
Sbjct: 386 GFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPKSELV 426

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BLAST of Pay0009121 vs. ExPASy TrEMBL
Match: A0A5D3CW62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00660 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.4e-125
Identity = 227/233 (97.42%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIG+PDSNISIYLQQ
Sbjct: 15  MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGMPDSNISIYLQQ 74

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGL+RMTKSTWDKKVEVYRKWGLSE
Sbjct: 75  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLRRMTKSTWDKKVEVYRKWGLSE 134

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAFRRHPWCMMLSEDKNNGAMDFFVN+MGCESSLAATRPLLLSLSLKKRILPRGYV
Sbjct: 135 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNEMGCESSLAATRPLLLSLSLKKRILPRGYV 194

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQV LSKGLIKKHGNPVSF GIPEKRFIEKIINP KEQIPGLLELYKQKLKDS
Sbjct: 195 YQVFLSKGLIKKHGNPVSFFGIPEKRFIEKIINPHKEQIPGLLELYKQKLKDS 247

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BLAST of Pay0009121 vs. ExPASy TrEMBL
Match: A0A5A7U7B5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00650 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 196/233 (84.12%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDY+QA+LGSEEKTLA IK FA IL  DLR SV PNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNILKYLQG 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P+ FLT+SIRFKE V+RV EMGFNPQ+L FV+AVSGL+ MTKSTWDKKVEVYRKWGLSE
Sbjct: 191 QPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAFRRHPWCMMLSEDK NGAMDFFVNKMGCESS AA+RP++LSLSLKKRILPRGYV
Sbjct: 251 EEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLLSKGLIKK+GNPVSF GI EKRFIEKIINP KEQIPGLLELYKQK  +S
Sbjct: 311 YQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKSMNS 363

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BLAST of Pay0009121 vs. ExPASy TrEMBL
Match: A0A1S3AXF9 (uncharacterized protein LOC103483816 OS=Cucumis melo OX=3656 GN=LOC103483816 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100
Identity = 188/223 (84.30%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 11  VLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKMFLTSSI 70
           +LGSEEKTLA IK FA IL  DLR SV PNIEILKQIGVPDSNI  YLQ +P+ FLT+SI
Sbjct: 1   MLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNILKYLQGQPRHFLTNSI 60

Query: 71  RFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSEEEICLAFRRH 130
           RFKE V+RV EMGFNPQ+L FV+AVSGL+ MTKSTWDKKVEVYRKWGLSEEEICLAFRRH
Sbjct: 61  RFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRH 120

Query: 131 PWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYVYQVLLSKGLI 190
           PWCMMLSEDK NGAMDFFVNKMGCESS AA+RP++LSLSLKKRILPRGYVYQVLLSKGLI
Sbjct: 121 PWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKGLI 180

Query: 191 KKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           KK+GNPVSF GI EKRFIEKIINP KEQIPGLLELYKQK  +S
Sbjct: 181 KKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKSMNS 223

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BLAST of Pay0009121 vs. ExPASy TrEMBL
Match: A0A5A7U0V4 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00670 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 5.0e-99
Identity = 190/233 (81.55%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +I  FDYIQAVLGSEEKTLA IK FA IL  DLR SVGPNIEILKQ GVPDSNI  YLQ 
Sbjct: 459 IIHNFDYIQAVLGSEEKTLAAIKQFAGILAQDLRISVGPNIEILKQNGVPDSNILKYLQY 518

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLTSSIRFKE V+RV EMGFNPQ+L FVVAV  L+ MTKSTWDKKVEVYRKWGLSE
Sbjct: 519 QPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSE 578

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAFRRHPWCMM+SEDK NGAMDFFVNKMGCESS AA RPL+LSLSLKKRILPRGYV
Sbjct: 579 EEICLAFRRHPWCMMVSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYV 638

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLLSKGLIKKHGN   F G  E RFIEK INP KEQIPGLLELY+Q   DS
Sbjct: 639 YQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHKEQIPGLLELYEQMRTDS 691

[Close]

BLAST of Pay0009121 vs. ExPASy TrEMBL
Match: A0A1S4DSR4 (uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483819 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.0e-97
Identity = 181/233 (77.68%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDYIQAVLGSEEKTL  IK+FA IL  DLR SVGPNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQY 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLT+ IRFKE VDRV EMGFNPQ+L FVVAV  L+ +TKSTWDKKVEVYRKWGLSE
Sbjct: 191 RPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAF+RHPWCMM+SEDK NG MDFFVNK+GCESS  A+RP+L+SLSLKKRI PRGYV
Sbjct: 251 EEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLL+KGLIKKH +   F    EK FIEKII+P KEQIPGLLE Y+QKL DS
Sbjct: 311 YQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDS 363

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BLAST of Pay0009121 vs. NCBI nr
Match: KAA0049462.1 (uncharacterized protein E6C27_scaffold171G007120 [Cucumis melo var. makuwa] >TYK16141.1 uncharacterized protein E5676_scaffold209G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 458.8 bits (1179), Expect = 2.9e-125
Identity = 227/233 (97.42%), Postives = 230/233 (98.71%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIG+PDSNISIYLQQ
Sbjct: 15  MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGMPDSNISIYLQQ 74

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGL+RMTKSTWDKKVEVYRKWGLSE
Sbjct: 75  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLRRMTKSTWDKKVEVYRKWGLSE 134

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAFRRHPWCMMLSEDKNNGAMDFFVN+MGCESSLAATRPLLLSLSLKKRILPRGYV
Sbjct: 135 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNEMGCESSLAATRPLLLSLSLKKRILPRGYV 194

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQV LSKGLIKKHGNPVSF GIPEKRFIEKIINP KEQIPGLLELYKQKLKDS
Sbjct: 195 YQVFLSKGLIKKHGNPVSFFGIPEKRFIEKIINPHKEQIPGLLELYKQKLKDS 247

[Close]

BLAST of Pay0009121 vs. NCBI nr
Match: KAA0049461.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16140.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-105
Identity = 196/233 (84.12%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDY+QA+LGSEEKTLA IK FA IL  DLR SV PNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYLQAMLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNILKYLQG 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P+ FLT+SIRFKE V+RV EMGFNPQ+L FV+AVSGL+ MTKSTWDKKVEVYRKWGLSE
Sbjct: 191 QPRHFLTNSIRFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAFRRHPWCMMLSEDK NGAMDFFVNKMGCESS AA+RP++LSLSLKKRILPRGYV
Sbjct: 251 EEICLAFRRHPWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLLSKGLIKK+GNPVSF GI EKRFIEKIINP KEQIPGLLELYKQK  +S
Sbjct: 311 YQVLLSKGLIKKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKSMNS 363

[Close]

BLAST of Pay0009121 vs. NCBI nr
Match: XP_008438830.1 (PREDICTED: uncharacterized protein LOC103483816 [Cucumis melo])

HSP 1 Score: 375.2 bits (962), Expect = 4.2e-100
Identity = 188/223 (84.30%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 11  VLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKMFLTSSI 70
           +LGSEEKTLA IK FA IL  DLR SV PNIEILKQIGVPDSNI  YLQ +P+ FLT+SI
Sbjct: 1   MLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNILKYLQGQPRHFLTNSI 60

Query: 71  RFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSEEEICLAFRRH 130
           RFKE V+RV EMGFNPQ+L FV+AVSGL+ MTKSTWDKKVEVYRKWGLSEEEICLAFRRH
Sbjct: 61  RFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRH 120

Query: 131 PWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYVYQVLLSKGLI 190
           PWCMMLSEDK NGAMDFFVNKMGCESS AA+RP++LSLSLKKRILPRGYVYQVLLSKGLI
Sbjct: 121 PWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKGLI 180

Query: 191 KKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           KK+GNPVSF GI EKRFIEKIINP KEQIPGLLELYKQK  +S
Sbjct: 181 KKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKSMNS 223

[Close]

BLAST of Pay0009121 vs. NCBI nr
Match: KAA0049463.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16142.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 370.5 bits (950), Expect = 1.0e-98
Identity = 190/233 (81.55%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +I  FDYIQAVLGSEEKTLA IK FA IL  DLR SVGPNIEILKQ GVPDSNI  YLQ 
Sbjct: 459 IIHNFDYIQAVLGSEEKTLAAIKQFAGILAQDLRISVGPNIEILKQNGVPDSNILKYLQY 518

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLTSSIRFKE V+RV EMGFNPQ+L FVVAV  L+ MTKSTWDKKVEVYRKWGLSE
Sbjct: 519 QPRVFLTSSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSE 578

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAFRRHPWCMM+SEDK NGAMDFFVNKMGCESS AA RPL+LSLSLKKRILPRGYV
Sbjct: 579 EEICLAFRRHPWCMMVSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYV 638

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLLSKGLIKKHGN   F G  E RFIEK INP KEQIPGLLELY+Q   DS
Sbjct: 639 YQVLLSKGLIKKHGNLHLFFGSSEHRFIEKFINPHKEQIPGLLELYEQMRTDS 691

[Close]

BLAST of Pay0009121 vs. NCBI nr
Match: XP_016899003.1 (PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899004.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_016899005.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo])

HSP 1 Score: 363.2 bits (931), Expect = 1.6e-96
Identity = 181/233 (77.68%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDYIQAVLGSEEKTL  IK+FA IL  DLR SVGPNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQY 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLT+ IRFKE VDRV EMGFNPQ+L FVVAV  L+ +TKSTWDKKVEVYRKWGLSE
Sbjct: 191 RPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAF+RHPWCMM+SEDK NG MDFFVNK+GCESS  A+RP+L+SLSLKKRI PRGYV
Sbjct: 251 EEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLL+KGLIKKH +   F    EK FIEKII+P KEQIPGLLE Y+QKL DS
Sbjct: 311 YQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDS 363

[Close]

BLAST of Pay0009121 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 174.9 bits (442), Expect = 7.7e-44
Identity = 88/227 (38.77%), Postives = 142/227 (62.56%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP+++++++VL S+EK +A ++    +   D   ++ PNI  + + GVP+  I + L  
Sbjct: 173 LIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTH 232

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQ-RMTKSTWDKKVEVYRKWGLS 120
            P+  +  +  F+    + +EMGFNPQ+  FV+A+  L  +  KS WDK  EVY++WG S
Sbjct: 233 FPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWS 292

Query: 121 EEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGY 180
           E++I  AF++HP CMMLSE K N  M++FVN+M       A  P++L  SL+KRI+PR  
Sbjct: 293 EDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCS 352

Query: 181 VYQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELY 227
           V +VL+S GL+K+  +  S     EK F+EK++   +E++P L+ LY
Sbjct: 353 VTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of Pay0009121 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 128.3 bits (321), Expect = 8.3e-30
Identity = 67/225 (29.78%), Postives = 127/225 (56.44%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP +D ++++L  EE  +  +K         +   V   + I +++GVPD +I   +Q 
Sbjct: 160 LIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQA 219

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
            P  F +   RF E ++RV   GF+P++  FV A+      ++S  ++K ++++ +G S+
Sbjct: 220 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 279

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           E+   A  R P C+ +S++K    +++ VN +G ++     RP++LSLS++KRI PR  V
Sbjct: 280 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 339

Query: 181 YQVLLSKGLIKKHG-NPVSFSGIPEKRFIEKIINPRKEQIPGLLE 225
             +LLSKGL+KK   N  +   +    F++K +   ++++P L++
Sbjct: 340 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of Pay0009121 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 68/218 (31.19%), Postives = 119/218 (54.59%), Query Frame = 0


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFA--VILCHDLRSSVGPNIEILKQIGVPDSNISIYL 60
           +IP  + +++++  + + L  I      ++L  D    + PNI  L+  G+  S ++  L
Sbjct: 143 LIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLL 202

Query: 61  QQKPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGL 120
           +++P++F  S  + +  V R  ++GF     + V AV  L  +++ T+D+KV+++   G 
Sbjct: 203 RRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGF 262

Query: 121 SEEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRG 180
           SE+EI    RR P  +  SEDK     +F++ +MG E    A RP +LS +L+KR++PR 
Sbjct: 263 SEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRL 322

Query: 181 YVYQVLLSKGLI----KKHGNPVSFSGIPEKRFIEKII 213
            V Q+L  KGL+    KK  N V    + E+ F+EK +
Sbjct: 323 KVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of Pay0009121 vs. TAIR 10
Match: AT5G23930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.2e-16
Identity = 65/292 (22.26%), Postives = 124/292 (42.47%), Query Frame = 0


Query: 5   FDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKM 64
           +DY++ +L  ++ + ++ K          +++   N+ +L+++GVP   +   L  + K 
Sbjct: 163 YDYVKEILQDQDSSSSSSKR--------KQTNRNRNVSVLRKLGVPQRLLLNLLISRAKP 222

Query: 65  FLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVE------------- 124
            +    RF+E+V ++ EMGF+P+   FV A+     ++  T ++KV              
Sbjct: 223 -VCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVW 282

Query: 125 -VYRKW---------------------GLSEEEICLA----------------------- 184
            V++KW                     GL++EE+CL                        
Sbjct: 283 AVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEEVCLVVKKYPECVGTSEEKIVKSVKTFL 342

Query: 185 ------------FRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRI 227
                        +RHP C+ L+ D      +F V  MG    + A+ P++L  SL+K +
Sbjct: 343 ELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFV 402

[Close]

BLAST of Pay0009121 vs. TAIR 10
Match: AT1G62010.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-14
Identity = 55/194 (28.35%), Postives = 90/194 (46.39%), Query Frame = 0


Query: 40  NIEILKQIGVPDSNISIYLQQKPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQ 99
           NI +L+++GVP   + + L  K +  +    +F  ++ +V EMGF+P    FV A+  L 
Sbjct: 176 NILVLRELGVPQKRLLLLLISKSQP-VCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLY 235

Query: 100 RMTKSTWDKKVEVYR--------------KW---------------------GLSEEEIC 159
           +M+  T ++K+ VYR              KW                     G S +   
Sbjct: 236 QMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFM 295

Query: 160 LAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYVYQVL 199
           + F+R P C+  S +      +F V +M       A+ P +L  SL+KR +PR  V +VL
Sbjct: 296 MMFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVL 355

The following BLAST results are available for this feature:

BLAST of Pay0009121 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	3.4e-04	22.32	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Pay0009121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CW62	1.4e-125	97.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U7B5	1.2e-105	84.12	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AXF9	2.0e-100	84.30	uncharacterized protein LOC103483816 OS=Cucumis melo OX=3656 GN=LOC103483816 PE=...	[more]
A0A5A7U0V4	5.0e-99	81.55	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSR4	8.0e-97	77.68	uncharacterized protein LOC103483819 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Pay0009121 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049462.1	2.9e-125	97.42	uncharacterized protein E6C27_scaffold171G007120 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0049461.1	2.5e-105	84.12	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16140.1 tr...	[more]
XP_008438830.1	4.2e-100	84.30	PREDICTED: uncharacterized protein LOC103483816 [Cucumis melo]	[more]
KAA0049463.1	1.0e-98	81.55	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16142.1 tr...	[more]
XP_016899003.1	1.6e-96	77.68	PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo] >XP_01...	[more]

BLAST of Pay0009121 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	7.7e-44	38.77	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	8.3e-30	29.78	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.5e-26	31.19	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	5.2e-16	22.26	Mitochondrial transcription termination factor family protein	[more]
AT1G62010.1	1.7e-14	28.35	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 156..190 e-value: 120.0 score: 11.2 coord: 19..50 e-value: 80.0 score: 12.1 coord: 124..155 e-value: 8.9 score: 15.3 coord: 55..85 e-value: 1100.0 score: 3.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 17..192 e-value: 6.0E-21 score: 74.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..231
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 1..219 e-value: 1.6E-41 score: 144.3
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 1..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009121.1	Pay0009121.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding