Pay0009104 (gene) Melon (Payzawat) v1

Overview
NamePay0009104
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr10: 10757593 .. 10758203 (+)
RNA-Seq ExpressionPay0009104
SyntenyPay0009104
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTAAAGGGTTTTAAGCATTTATACCTTATAACAACGTCAGAACCCTTGTAATGTCGCTCTGATTGTTTCAAACCTCAGGTTCAAATCCTGAAAACGAACCCTACTTCTCGCCTGCTTTTCCCTATTCCAACTTCACCGTCTGTTCTCCCACACCACTCATCATACGCTTCTCCCTCTGCAACTTCGACGCCACGGTAGCCGCACTTGGAAGCGGGTAAGGCAGTATCCATATTCAACAAGTTTTTGAGATTTTATTGAAATTGGTGTTCTTTAATCGCTTAGATTGGTTGATACCAGATTTTAATTTTTGGAGGGTTAACGTGTCCCACTTTTGGCAATTTCCCCCTCTCCACCGTCTAATCCCACGGAGCCTTACCTCCGCCGTTCATTTCCTCCTTATGGCAACGCAACGCCGAATCTGGTAACATCATTCTGGGGTTGCCTTCACTTGAATATGTTAGCCTTCTCTGGTAGTCCATTCTCAAATTCATCTAGTCAACTACAGGTGTGAAGCTCTGACTGTTTTCTATGCATATCAACATGACACGTGCAAGAAGAAAACAAGAAAAGAGAAATATGAAGGAAAGATTACAGAAAGGAATTGA

mRNA sequence

ATGCCATTAAAGGGTTCAAATCCTGAAAACGAACCCTACTTCTCGCCTGCTTTTCCCTATTCCAACTTCACCGTCTGTTCTCCCACACCACTCATCATACGCTTCTCCCTCTGCAACTTCGACGCCACGGTAGCCGCACTTGGAAGCGGGGTTAACGTGTCCCACTTTTGGCAATTTCCCCCTCTCCACCGTCTAATCCCACGGAGCCTTACCTCCGCCGTTCATTTCCTCCTTATGGCAACGCAACGCCGAATCTGGTGTGAAGCTCTGACTGTTTTCTATGCATATCAACATGACACGTGCAAGAAGAAAACAAGAAAAGAGAAATATGAAGGAAAGATTACAGAAAGGAATTGA

Coding sequence (CDS)

ATGCCATTAAAGGGTTCAAATCCTGAAAACGAACCCTACTTCTCGCCTGCTTTTCCCTATTCCAACTTCACCGTCTGTTCTCCCACACCACTCATCATACGCTTCTCCCTCTGCAACTTCGACGCCACGGTAGCCGCACTTGGAAGCGGGGTTAACGTGTCCCACTTTTGGCAATTTCCCCCTCTCCACCGTCTAATCCCACGGAGCCTTACCTCCGCCGTTCATTTCCTCCTTATGGCAACGCAACGCCGAATCTGGTGTGAAGCTCTGACTGTTTTCTATGCATATCAACATGACACGTGCAAGAAGAAAACAAGAAAAGAGAAATATGAAGGAAAGATTACAGAAAGGAATTGA

Protein sequence

MPLKGSNPENEPYFSPAFPYSNFTVCSPTPLIIRFSLCNFDATVAALGSGVNVSHFWQFPPLHRLIPRSLTSAVHFLLMATQRRIWCEALTVFYAYQHDTCKKKTRKEKYEGKITERN
Homology
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BLAST of Pay0009104 vs. ExPASy TrEMBL
Match: A0A0A0KSY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G292180 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-04
Identity = 41/91 (45.05%), Postives = 49/91 (53.85%), Query Frame = 0 

Query: 27  SPTPLIIRFSLCNFDATVAALGSGV-NVSHFWQFPPLHRLIPRSLT----SAVHFLLMA- 86
           +P P      L  FDATV  L SG  + S   +  PL  + P   T     A  +L  + 
Sbjct: 3   NPIPPSKTLLLSCFDATVPTLSSGYKSPSPVEKSVPLLAISPVCATPPSNPAEPYLRRSF 62

Query: 87  -TQRRIWCEALTVFYAYQHDTCKKKTRKEKY 111
             QRRI CEAL++FY  QH TCKKKTRKEKY
Sbjct: 63  PPQRRIRCEALSIFYTCQHGTCKKKTRKEKY 93

The following BLAST results are available for this feature:
BLAST of Pay0009104 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0009104 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSY61.8e-0445.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G292180 PE=4 SV=1[more]
BLAST of Pay0009104 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Pay0009104 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0009104.1Pay0009104.1mRNA