Pay0009065 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009065
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribosomal protein L5
Location	chr07: 2072286 .. 2072864 (+)
RNA-Seq Expression	Pay0009065
Synteny	Pay0009065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGTGGAGCGGCTTTTTGAAAAAAAAATGGAATTTGAAAAAAAGAAAAGATTGA

mRNA sequence

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGTGGAGCGGCTTTTTGAAAAAAAAATGGAATTTGAAAAAAAGAAAAGATTGA

Coding sequence (CDS)

ATGGGTCCGAGCCAACAACTCCAGTTTCATTACGAAGATATATCACGTCAGGATCCGTTGCTCAAACAGAATCACACCAACGTTATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCCTATGATTTCAGAAGAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGGTCAGAAATTGATACAGACAAGGGGTTCGACAGGAAAGTCCTTTCGATCCAATCCATTCTTGGAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCGGCCGAAATACGGGAAAACTCCATGAAATTCTCGATGGAAACGGAGTTTTTCGAATTCTTCCCGGAACTGGCAGATCATTTCGAGATCTTCTCTAAGACTCTAGGGTTCAATGTGACTATTGTCACTTCGGCCAAGACACAAGATGAGACTTTACCACCGTGGAGCGGCTTTTTGAAAAAAAAATGGAATTTGAAAAAAAGAAAAGATTGA

Protein sequence

MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKKKWNLKKRKD

Homology

[Close]

BLAST of Pay0009065 vs. ExPASy Swiss-Prot
Match: P42793 (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.4e-64
Identity = 131/178 (73.60%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+ RQD LLK N+ NVMEVPG   IRVVPK PY+F  KNGKLAMEI  GQK IQ
Sbjct: 4   LNFHYEDVLRQDLLLKLNYANVMEVPGLCEIRVVPKAPYNFIIKNGKLAMEIPCGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNF  +I+   VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFLVRIL--TVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKK 184
           IR+NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETL  WSGFL+K
Sbjct: 124 IRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLLLWSGFLQK 179

[Close]

BLAST of Pay0009065 vs. ExPASy Swiss-Prot
Match: Q05492 (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 1.0e-62
Identity = 133/180 (73.89%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPK--EPYDFRRKNGKLAMEILRGQKL 66
           L FHYED+ RQD LLK N  NVMEVPG   IR+VPK    YDF  KNGKLAMEILRGQK 
Sbjct: 4   LNFHYEDVLRQDLLLKLNLANVMEVPGLCEIRIVPKTSSTYDFIIKNGKLAMEILRGQKF 63

Query: 67  IQT-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP 126
           IQT RGSTGKSFRSNPFLESNKDKGYVSDLAR+S LRGH MSNF  +I+   VMS L+S 
Sbjct: 64  IQTERGSTGKSFRSNPFLESNKDKGYVSDLARQSILRGHGMSNFLVRIL--TVMSLLDSR 123

Query: 127 AEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKK 184
            EIRENS++FSMETEF EF PEL DHFEIF     FNVTIVTSA TQDETL  WSGFL+K
Sbjct: 124 VEIRENSIQFSMETEFCEFSPELEDHFEIFEHIRRFNVTIVTSANTQDETLLLWSGFLQK 181

[Close]

BLAST of Pay0009065 vs. ExPASy Swiss-Prot
Match: P49388 (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-62
Identity = 128/178 (71.91%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLL +    + +  GS  IRVVP  PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLNRITPTLWKFLGSCEIRVVPNGPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKK 184
           IR+NS++FSMETEF EF P+L DHFEIF    GFNVTIVTSA TQDETLP WSGFL+K
Sbjct: 124 IRKNSIQFSMETEFCEFAPQLQDHFEIFEHIRGFNVTIVTSANTQDETLPLWSGFLQK 179

[Close]

BLAST of Pay0009065 vs. ExPASy Swiss-Prot
Match: P51409 (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 4.1e-56
Identity = 126/178 (70.79%), Postives = 135/178 (75.84%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+ RQD LLK N+ NVMEVPG   I VVPK       KNGKLAMEI  GQKL Q
Sbjct: 8   LYFHYEDVLRQDLLLKLNYANVMEVPGLCKIIVVPKTAPSI--KNGKLAMEISCGQKLKQ 67

Query: 67  TRGSTGKSFRSNPFLESNKD-KGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
            R STGKSFRSNPFL SNKD KGYVSDLAR+STLRGH MS+F  +  I  VMS L+SP E
Sbjct: 68  -RASTGKSFRSNPFLGSNKDKKGYVSDLARQSTLRGHGMSHFLVR--ISTVMSLLDSPLE 127

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKK 184
           IRE S++FSMETEF EF PEL DHFEIF    GFNVTIVTSA TQDETL  WSGFL+K
Sbjct: 128 IRERSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIVTSANTQDETLLLWSGFLQK 180

[Close]

BLAST of Pay0009065 vs. ExPASy Swiss-Prot
Match: P26860 (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 8.1e-44
Identity = 104/184 (56.52%), Postives = 129/184 (70.11%), Query Frame = 0


Query: 6   QLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLI 65
           +L+FHY  + R D LLK N+ N+MEVP    I VVPK P +F  KN KLAMEI+ GQK I
Sbjct: 8   RLEFHYNQVIRPDLLLKINYENIMEVPRLCKIIVVPKAPSNF-IKNVKLAMEIVCGQKFI 67

Query: 66  QT--RGSTGKSFRSNPFL---ESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 125
           QT  RGSTGKSFR N F+   ES +D GYV+ LAR STLRGH M NF  K++   ++SF 
Sbjct: 68  QTRSRGSTGKSFRFNKFVLNQESKRDTGYVTYLAR-STLRGHIMYNFLEKLV--TIISFY 127

Query: 126 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 185
           + P +I++NS++ SM T     FPE+ DHFEIF    GF+VTIVTSA TQDET+  WSGF
Sbjct: 128 DYPVKIQKNSIQLSMATSLLRLFPEIQDHFEIFEHIRGFDVTIVTSANTQDETVILWSGF 187

[Close]

BLAST of Pay0009065 vs. ExPASy TrEMBL
Match: A0A5A7SYB1 (Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48303G00010 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 48  MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 107

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 108 GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 167

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF
Sbjct: 168 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 227

Query: 181 LKKKWNLKKRKD 193
           LKKKWNLKKRKD
Sbjct: 228 LKKKWNLKKRKD 239

[Close]

BLAST of Pay0009065 vs. ExPASy TrEMBL
Match: G3EU44 (Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF
Sbjct: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180

Query: 181 LKKKWNLKKRKD 193
           LKKKWNLKKRKD
Sbjct: 181 LKKKWNLKKRKD 192

[Close]

BLAST of Pay0009065 vs. ExPASy TrEMBL
Match: A0A3S9JIG3 (Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF
Sbjct: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180

Query: 181 LKKKWNLKKRKD 193
           LKKKWNLKKRKD
Sbjct: 181 LKKKWNLKKRKD 192

[Close]

BLAST of Pay0009065 vs. ExPASy TrEMBL
Match: G3EIZ3 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 172/196 (87.76%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDISRQ+PLLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEILR
Sbjct: 1   MGPSLQLQFHYEDISRQEPLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETLPPWSGF
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLPPWSGF 180

Query: 181 LKKKWNL----KKRKD 193
           L+KKWNL    +KRKD
Sbjct: 181 LRKKWNLNLKKRKRKD 196

[Close]

BLAST of Pay0009065 vs. ExPASy TrEMBL
Match: Q7Y6H0 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.0e-85
Identity = 167/196 (85.20%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDI RQ+ LLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEIL 
Sbjct: 1   MGPSLQLQFHYEDILRQELLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILC 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETL  WSGF
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLLLWSGF 180

Query: 181 LKKKWNL----KKRKD 193
           L+KKWNL    +KRKD
Sbjct: 181 LRKKWNLNLKKRKRKD 196

[Close]

BLAST of Pay0009065 vs. NCBI nr
Match: KAA0034876.1 (ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 384.8 bits (987), Expect = 4.4e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 48  MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 107

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 108 GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 167

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF
Sbjct: 168 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 227

Query: 181 LKKKWNLKKRKD 193
           LKKKWNLKKRKD
Sbjct: 228 LKKKWNLKKRKD 239

[Close]

BLAST of Pay0009065 vs. NCBI nr
Match: AEN56134.1 (ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5 [Cucumis melo var. momordica])

HSP 1 Score: 384.8 bits (987), Expect = 4.4e-103
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR
Sbjct: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF
Sbjct: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180

Query: 181 LKKKWNLKKRKD 193
           LKKKWNLKKRKD
Sbjct: 181 LKKKWNLKKRKD 192

[Close]

BLAST of Pay0009065 vs. NCBI nr
Match: YP_004849341.1 (ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 3.2e-90
Identity = 172/196 (87.76%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDISRQ+PLLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEILR
Sbjct: 1   MGPSLQLQFHYEDISRQEPLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILR 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETLPPWSGF
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLPPWSGF 180

Query: 181 LKKKWNL----KKRKD 193
           L+KKWNL    +KRKD
Sbjct: 181 LRKKWNLNLKKRKRKD 196

[Close]

BLAST of Pay0009065 vs. NCBI nr
Match: AAP33159.1 (ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis sativus] >AAP33162.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 4.1e-85
Identity = 167/196 (85.20%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 1   MGPSQQLQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILR 60
           MGPS QLQFHYEDI RQ+ LLK N+TNVMEVPGSS IRVVPKEPYDFR KNGKLAMEIL 
Sbjct: 1   MGPSLQLQFHYEDILRQELLLKLNYTNVMEVPGSSEIRVVPKEPYDFRSKNGKLAMEILC 60

Query: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFL 120
           GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGH M +F FKIIIGIV+SFL
Sbjct: 61  GQKLIQTRGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHSMFHFFFKIIIGIVLSFL 120

Query: 121 NSPAEIRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGF 180
           NSP EIR+NS++F METEFFEFFPELADHFEIFS TLGF+VTIVTSAKTQDETL  WSGF
Sbjct: 121 NSPGEIRKNSIQFPMETEFFEFFPELADHFEIFSNTLGFHVTIVTSAKTQDETLLLWSGF 180

Query: 181 LKKKWNL----KKRKD 193
           L+KKWNL    +KRKD
Sbjct: 181 LRKKWNLNLKKRKRKD 196

[Close]

BLAST of Pay0009065 vs. NCBI nr
Match: YP_009913650.1 (ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa acutangula])

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-71
Identity = 145/178 (81.46%), Postives = 152/178 (85.39%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PYDF  KNGKLAMEI RGQK IQ
Sbjct: 4   LDFHYEDVSRQDPLLKLNHANVMEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFLESNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+SP E
Sbjct: 64  TQRGSTGKSFRSNPFLESNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDSPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKK 184
           IRENS++FSMETEF EF PEL DHFEIF   LGFNVTIVTSA TQDETLPPWSGFL+K
Sbjct: 124 IRENSIQFSMETEFCEFSPELEDHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQK 179

[Close]

BLAST of Pay0009065 vs. TAIR 10
Match: AT2G07725.1 (Ribosomal L5P family protein )

HSP 1 Score: 265.4 bits (677), Expect = 3.6e-71
Identity = 138/178 (77.53%), Postives = 148/178 (83.15%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKK 184
           IR+NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETLP WSGFL+K
Sbjct: 124 IRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLPLWSGFLQK 179

[Close]

BLAST of Pay0009065 vs. TAIR 10
Match: ATMG00210.1 (ribosomal protein L5 )

HSP 1 Score: 265.4 bits (677), Expect = 3.6e-71
Identity = 138/178 (77.53%), Postives = 148/178 (83.15%), Query Frame = 0


Query: 7   LQFHYEDISRQDPLLKQNHTNVMEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQ 66
           L FHYED+SRQDPLLK NH NVMEVPGS  IRVVPK PY+F  KNGKLAMEI RGQK IQ
Sbjct: 4   LNFHYEDVSRQDPLLKPNHANVMEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQ 63

Query: 67  T-RGSTGKSFRSNPFLESNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAE 126
           T RGSTGKSFRSNPFL SNKDKGYVSDLAR+STLRGH MSNFS +  I  VMS L+ P E
Sbjct: 64  TQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVE 123

Query: 127 IRENSMKFSMETEFFEFFPELADHFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKK 184
           IR+NS++FSMETEF EF PEL DHFEIF    GFNVTI+TSA TQDETLP WSGFL+K
Sbjct: 124 IRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLPLWSGFLQK 179

The following BLAST results are available for this feature:

BLAST of Pay0009065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42793	5.4e-64	73.60	60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 ...	[more]
Q05492	1.0e-62	73.89	60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 ...	[more]
P49388	1.7e-62	71.91	60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 S...	[more]
P51409	4.1e-56	70.79	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=...	[more]
P26860	8.1e-44	56.52	60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5...	[more]

BLAST of Pay0009065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYB1	2.1e-103	100.00	Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
G3EU44	2.1e-103	100.00	Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1	[more]
A0A3S9JIG3	2.1e-103	100.00	Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1	[more]
G3EIZ3	1.6e-90	87.76	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]
Q7Y6H0	2.0e-85	85.20	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]

BLAST of Pay0009065 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034876.1	4.4e-103	100.00	ribosomal protein L5 [Cucumis melo var. makuwa]	[more]
AEN56134.1	4.4e-103	100.00	ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5...	[more]
YP_004849341.1	3.2e-90	87.76	ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis...	[more]
AAP33159.1	4.1e-85	85.20	ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis...	[more]
YP_009913650.1	1.5e-71	81.46	ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa ...	[more]

BLAST of Pay0009065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07725.1	3.6e-71	77.53	Ribosomal L5P family protein	[more]
ATMG00210.1	3.6e-71	77.53	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002132	Ribosomal protein L5	PIRSF	PIRSF002161	RPL5p_RPL5a_RPL11e_RPL5o	coord: 2..190 e-value: 1.9E-25 score: 87.3
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 5..184
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 6..181 e-value: 1.2E-20 score: 75.8
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 5..182
None	No IPR available	PANTHER	PTHR11994:SF11	60S RIBOSOMAL PROTEIN L5, MITOCHONDRIAL	coord: 5..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009065.1	Pay0009065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome