Pay0009028 (gene) Melon (Payzawat) v1

Overview


Name	Pay0009028
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Polyadenylate-binding protein 2-like
Location	chr08: 3898854 .. 3902948 (+)
RNA-Seq Expression	Pay0009028
Synteny	Pay0009028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTTTAAGTTGAAGTAGAAAATTTGATTTTTGTGGGTATAAACAAAATGTAATGCTTTAGTTAAGTAAGGAATGGTAACTTCACTTCTGTAAAGATGTCAGAGAAAGAGTCTATAAATAAGCAGCTTCATCTTACAATGCCAAATTCTAAACTTAAACTGACTTTCGGTGTTGTACTAAATTTGACAACACAAACCCTAAGCCAAACTGTAACATAGAGCTGAATGAACCAAATATCCAAGTCTTTGGGCTGAGAGCTCTCATGGACTTGGGTTGACTCAGGCAGTCCTTTGAAACGAGTCTTTAGCCGATTTATTGTTCATTATAAAATGGTCCGCGGTTGGGCTTTATAGATTACCCTATATATCGATCGTATTGTGGGAGCCTGTTCGGACACAATTAGGAAGAACGGAAATGGAGGAAGAGGAACACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTGCCGCCGATGACGACGCCATCAAGGTTCCCTCTGTCCTCTATTTCATAACTGTAGAGATCCATTACCAATACAGTTGTGTAATGGAAGCTTGATCTGCGTGGTATGTGAATTTGTTGTCTTCTGTGGATGTTGCAGGAGCTGGACGAGATGAAGAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCCGTTCAAGGTTTACCTCCATCTCGAATTACCTTCGACTAAATTGATTTTGAAGTTCGTATGAAGCTACTGTAGCATCTTCAATCTGCCTGATTATAATTTCTTATACAGATCCTGCTGGTTCGGCTGTAAGTCAAGAAAGCAAAGAAGAGGCAGATTCGCGATCTGTATTTGTTGGCAACGTGAGATGAGATCTATGGTCTTGATATAAGCACGTTATTCTTCGTGTAGTTGGTCAAATGCTATTTCACAAGCATGCTGATCTTGATAATATTTCTTTTGCAACCTGACAAATTTAGTTTACACTACTTGCTAAGTTGTTTTGTTGTTAATTTCTGTAGATGAGCATATCCTAGGCGAAGATTAGGTTTACGTAGATGTCACTTGTTCCTGCAAAGCAATTGCTGTCTTAACTTACACCTTTAATCTATGTCCAGTCAAATCTAATTAGGGTTTGATAAAATGGTTTTGGGTTCCTTTTCCTTTCTTATGGTATTGAGGGTTCTACGAGCTCAAGTCAGAGATATTGCAATCATGTATTACTTGAAGGCTTGGAAGCGAGAGTTTTTAGATATATTATTTTGATCCCTGCGTTGTGTGCGCTATTTGGACTCTTGCTACATTTAGTTTTAACTTAAAGGGTTAAGTATTGATGTATCCATTTTACTAGAATTCTTGCCCTAGGTTTTTCTTTTTTCTTTATTCCTTTGTTATGTTGTGGATGTGCTTCTTCACCATGTCAGAGTAGATGTTTAACTTGTTTGTCTCGCTATGATCGCAGGGTCATTCATTTTACCCGAAGTTCTCAGTATTTGCTCTGGGATGATTGCAATATAATTCTATTAGGAAAATTACTTATTGTGTCATTAAGATTGTATTCAAGCAGTAAAAGAAAGAAAATTTATGTGTGTTTGAAACAAATTGAAGGAAAAAAAGATCAAAATAAAAGAAAAGAAGTTTCTCTTGTTTACAGAAAAGAGAAAAAAGAAAAAGAAAGAGAAAGAGAAAAAGAAATATTAAAAAAAAGAGAGTATAAGATGGAAAAGAAACCTTTATAATTGATAGGGGGAAACTGAGTGACCGAAAAAAGGAAGAGGAAAAGGAATGTGAAGATTGGGAAAACGACATTGGTCGATTTAGTTCATTTGATCCAAAAAAGTATACATTATTGTGAACTTAGGTAAGGATGGATGGAAATGTGAACTAAAGAAGCTTCAACTTCAATTCATGAGGGCATGATCACGTCAATGGAGACAAATCATTTGCATGCAATGTTAGTTGCAGAGCATTGTTGCTGCTGGGAATGATGGTAATGGTAACTTTTGCTTCATAAATGAGGGCTATTTAACTGTCCTTATGGGGGTACATAATTTTTCTTTTCTTGTGGCTTTGATATCGATATCTTGGTTCTATTATCTCCCTCACAGGTATTGCGTGCTGAAAATTTGTCACTGGCTGAAAATTTGTCACTGGCAACTATCTATCCTCAGTAGATCAGTTTCTGTTCCTTGAATAGCTTTAGCACAATTTATTTTTCCCCTTCCTTTTAATTTTATTTTGCGAGGCTTTACCTTCTTAGTGCCTTGTACTTTAAGAGTATCTGGCTTTTGTCTGTGCTTCAAATGAGTAGCCTATCTATGCGCAGAAGAGATATTGAGTATTCATTTATGGCACTTAGCAGCAGTCCTTCATGTGGTTTAGGACGTATGGCAGTTACCAATGAGTGATTTCCTCGACTTTAGTGTCAATTAAATCACAACTTGAGGTGGTGGAGAGTTTTCAGTAGTAGTTAGGATATTTTTATGATATATGGAGATGGGAGATGAGAATTGCTCATAAAGTTTATCATATCCGAAAGAGATATGCTTGGTGCAAATGAACTATGTATTTCTAGAAGTGGACACTGGACAGTGCTTGAGGGGAAGTGCTAATTACTAGACATACACTAAAATTAACTTTCATAAATCATAATATCACTACACATTTATGGATGACAGACAAGTCACAGGCAGATGTTAAAATGTTGATTGCTTAAGTTTTTATCTTAGTTGCCTTCTTTTCAAGTGGCCAAATAATAGAGTTGGGATTGGCATGAGTCATGATGCATACGGAAATATATTTTTTTAAAAAAATGTTTGACATGACCATCGATTACTGATGTTGGAGTAAATATCCTACAGCGATTCCGTAACTTTTCTGTTGCTCTAGGAGCAGTTCACAAAGATTGGTTCATCTTCTTTTCTAGTTTTTAACTTTTAAGATAAAGGATCACATAGTCCATCAGGTTAAAGGAGAATCAATCAACGTGTTTGAGCTGTTTATTAGTTTTGAGTGCAATAAAATATTCATACTTTTTAAGTTGGTCCTCTTTGGTATTATACTGCTATCGTTTCCATGCTTTGCTTATGATTTAGTTTGTGTTTGATTAAATAACATTTAAGATGGAATTGGACTTGCAGGTTGATTATGCGTGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACTATTCTCACGGATAAATTTGGTCATCCCAAGGGCTTTGCTTATGTGGAGTTTGTTGAAGCCGAAGCTGTTCAGGAGGCACTTCTTTTAAACGAGACAGAGTTGCATGGAAGACAATTGAAGGTAGCTCCTTGGGGAAAGATGATTTACGTTTCTATTCTATCAAGTATTGGACATTGGCATACTAATTCTACATTTTATTATTGGCGCCGTTATCTGTGCATGTTGTTTGAGTTCTTATAACTAATGTTAAATGGTTTTAATATCATTCTGTTCATCTCAGGTTCAACAAAAGCGAACAAATGTTCCCGGTATGAAGCAGTATTTTCCCCAGCGTTACAATCCTTACATGGGCTATCGATCCAGGAGGCCTTACGTGCCCCCTTATTTTTACTCACCATATGGAGGATATGGGTAAGTTTCTTGCATGACACACACATATATATAGATTTACATCTACTACAGATTGATGATACTCCACATCCTGCTGCAGGAAAACACCCCGGTTCCGAAGGCCCATGCGATACATGCCATACTACTAGGAGGGGCTTTGCCCATAATTCAATTACGTTGTGATACTATATGTACGTATTGTACGATTTTACTGTGGTTTAGAGCCAATAGAACTATGGATTTGATTATCTTCAGCTTTTTTTTGTTGCAATTACATCAAACGATCTAATGTAAGAGAGATGATAATAGTTCATCAGGAACCTATTTATCATGTTCGATTTTTTTAGGAGGTTTCTGGGAGAGATTGATTGTATGCTTGGATATTTCTGCCTCTATTATCTTCTCAAGTACCGGTTTTGCTTAGGCGACCAGAACTTTCAATCAGAAACGTTGGTAATTT

mRNA sequence

GTTTTTTTAAGTTGAAGTAGAAAATTTGATTTTTGTGGGTATAAACAAAATGTAATGCTTTAGTTAAGTAAGGAATGGTAACTTCACTTCTGTAAAGATGTCAGAGAAAGAGTCTATAAATAAGCAGCTTCATCTTACAATGCCAAATTCTAAACTTAAACTGACTTTCGGTGTTGTACTAAATTTGACAACACAAACCCTAAGCCAAACTGTAACATAGAGCTGAATGAACCAAATATCCAAGTCTTTGGGCTGAGAGCTCTCATGGACTTGGGTTGACTCAGGCAGTCCTTTGAAACGAGTCTTTAGCCGATTTATTGTTCATTATAAAATGGTCCGCGGTTGGGCTTTATAGATTACCCTATATATCGATCGTATTGTGGGAGCCTGTTCGGACACAATTAGGAAGAACGGAAATGGAGGAAGAGGAACACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCCGTTCAAGATCCTGCTGGTTCGGCTGTAAGTCAAGAAAGCAAAGAAGAGGCAGATTCGCGATCTGTATTTGTTGGCAACGTTGATTATGCGTGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACTATTCTCACGGATAAATTTGGTCATCCCAAGGGCTTTGCTTATGTGGAGTTTGTTGAAGCCGAAGCTGTTCAGGAGGCACTTCTTTTAAACGAGACAGAGTTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGAACAAATGTTCCCGGTATGAAGCAGTATTTTCCCCAGCGTTACAATCCTTACATGGGCTATCGATCCAGGAGGCCTTACGTGCCCCCTTATTTTTACTCACCATATGGAGGATATGGGAAAACACCCCGGTTCCGAAGGCCCATGCGATACATGCCATACTACTAGGAGGGGCTTTGCCCATAATTCAATTACGTTGTGATACTATATGTACGTATTGTACGATTTTACTGTGGTTTAGAGCCAATAGAACTATGGATTTGATTATCTTCAGCTTTTTTTTGTTGCAATTACATCAAACGATCTAATGTAAGAGAGATGATAATAGTTCATCAGGAACCTATTTATCATGTTCGATTTTTTTAGGAGGTTTCTGGGAGAGATTGATTGTATGCTTGGATATTTCTGCCTCTATTATCTTCTCAAGTACCGGTTTTGCTTAGGCGACCAGAACTTTCAATCAGAAACGTTGGTAATTT

Coding sequence (CDS)

ATGGAGGAAGAGGAACACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGAGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAAAAGGAAATGGGCGCCGTTCAAGATCCTGCTGGTTCGGCTGTAAGTCAAGAAAGCAAAGAAGAGGCAGATTCGCGATCTGTATTTGTTGGCAACGTTGATTATGCGTGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACTATTCTCACGGATAAATTTGGTCATCCCAAGGGCTTTGCTTATGTGGAGTTTGTTGAAGCCGAAGCTGTTCAGGAGGCACTTCTTTTAAACGAGACAGAGTTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGAACAAATGTTCCCGGTATGAAGCAGTATTTTCCCCAGCGTTACAATCCTTACATGGGCTATCGATCCAGGAGGCCTTACGTGCCCCCTTATTTTTACTCACCATATGGAGGATATGGGAAAACACCCCGGTTCCGAAGGCCCATGCGATACATGCCATACTACTAG

Protein sequence

MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY

Homology

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BLAST of Pay0009028 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 2.0e-91
Identity = 177/217 (81.57%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQ 60
           MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQ
Sbjct: 1   MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 61  AKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTI 120
           AKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61  AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 121 LTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNP 180
           L DKFG PKGFAYVEFVE EAVQEAL LNE+ELHGRQLKV  KRTNVPGMKQY P R+NP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180

Query: 181 YMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY 212
            MGYR RRP+VPPYFYSPY GYGK PRFRRPMRYMPY
Sbjct: 181 SMGYRFRRPFVPPYFYSPY-GYGKAPRFRRPMRYMPY 216

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BLAST of Pay0009028 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-88
Identity = 174/221 (78.73%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAAL 60
           MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAAL
Sbjct: 1   MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60

Query: 61  REMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVN 120
           REMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNVDYACTPEEVQQHFQ+CGTV+
Sbjct: 61  REMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVH 120

Query: 121 RVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQ 180
           RVTILTDKFG PKGFAYVEFVE EAVQEAL LNE+ELHGRQLKV QKRTNVPG+KQ+  +
Sbjct: 121 RVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGR 180

Query: 181 RYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY 212
           R+NPYMGYR RRP++ PY YSPY GYGK PRFRRPMRYMPY
Sbjct: 181 RFNPYMGYRFRRPFMSPYMYSPY-GYGKAPRFRRPMRYMPY 219

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BLAST of Pay0009028 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.3e-68
Identity = 149/228 (65.35%), Postives = 173/228 (75.88%), Query Frame = 0


Query: 2   EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEM 61
           +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+
Sbjct: 5   DEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEI 64

Query: 62  EEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHF 121
           EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSRS++VGNVDYACTPEEVQQHF
Sbjct: 65  EEEAGALREMQAKAEKDMGASQDPSG-GVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHF 124

Query: 122 QSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPG 181
           QSCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNE+ELHGRQ+KV  KRTNVPG
Sbjct: 125 QSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPG 184

Query: 182 MKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY 212
           M+Q F  R  P+   R   P VP  FY PY  YG+ PRFRRPMRY PY
Sbjct: 185 MRQ-FRGRGRPFRPMRGFMPGVP--FYPPY-AYGRVPRFRRPMRYRPY 227

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BLAST of Pay0009028 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-32
Identity = 91/174 (52.30%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 25  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEA 84
           +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++          KE  
Sbjct: 2   SDQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKESI 61

Query: 85  DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAVQEA 144
           D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF GHPKGFAY+EF E   V  A
Sbjct: 62  DAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNA 121

Query: 145 LLLNETELHGRQLKVQQKRTNVPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY 189
           LLLN + LH R LKV  KRTNVPGM +   +     R     GYR R     PY
Sbjct: 122 LLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAPY 166

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BLAST of Pay0009028 vs. ExPASy Swiss-Prot
Match: Q28165 (Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 138.7 bits (348), Expect = 7.9e-32
Identity = 97/207 (46.86%), Postives = 127/207 (61.35%), Query Frame = 0


Query: 2   EEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEM 61
           EEEE      E  + EGD    A +D    EL+ +K R++EMEEEA  L+E+Q +VEK+M
Sbjct: 97  EEEE------ESGLVEGDPGDGAIED---PELEAIKARVREMEEEAEKLKELQNEVEKQM 156

Query: 62  GAVQDPAGSA----VSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 121
             +  P G+A    +S E K EAD+RS++VGNVDY  T EE++ HF  CG+VNRVTIL D
Sbjct: 157 N-MSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCD 216

Query: 122 KF-GHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYM 181
           KF GHPKGFAY+EF + E+V+ +L L+E+   GRQ+KV  KRTN PG+      R  P  
Sbjct: 217 KFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGIST--TDRGFPRA 276

Query: 182 GYRSRRPYVPPYFYSPYGGYGKTPRFR 204
            YR+R           Y G+   PR R
Sbjct: 277 RYRARTTNYNSSRSRFYSGFNSRPRGR 291

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BLAST of Pay0009028 vs. ExPASy TrEMBL
Match: A0A5A7T2C2 (Polyadenylate-binding protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002980 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.2e-113
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
           HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS
Sbjct: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 212

[Close]

BLAST of Pay0009028 vs. ExPASy TrEMBL
Match: A0A0A0KG83 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499790 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.7e-112
Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
           HPKGFAYVEFVEAEA+QEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS
Sbjct: 121 HPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 212

[Close]

BLAST of Pay0009028 vs. ExPASy TrEMBL
Match: A0A6J1HIK8 (polyadenylate-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463324 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
            PKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRS
Sbjct: 121 QPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPY GYGKTPR+RRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY 211

[Close]

BLAST of Pay0009028 vs. ExPASy TrEMBL
Match: A0A6J1KVH8 (polyadenylate-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111496810 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           M+EEEHEVYGGEIPVEEGD+DMSAADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MDEEEHEVYGGEIPVEEGDVDMSAADDEAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDP G+AVSQESKEE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPTGAAVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
            PKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRS
Sbjct: 121 QPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPY GYGKTPR+RRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY 211

[Close]

BLAST of Pay0009028 vs. ExPASy TrEMBL
Match: A0A6J1BTY4 (polyadenylate-binding protein 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005528 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.0e-106
Identity = 201/212 (94.81%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           MEEEEHEVYGGEIPVEE D+DMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAG+AVSQE+KEE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
           HPKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS
Sbjct: 121 HPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPY GYGK PRFRR M+YMPYY
Sbjct: 181 RRPYVPPYFYSPY-GYGKAPRFRRSMQYMPYY 211

[Close]

BLAST of Pay0009028 vs. NCBI nr
Match: KAA0036316.1 (polyadenylate-binding protein 2-like [Cucumis melo var. makuwa] >TYK12710.1 polyadenylate-binding protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-112
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
           HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS
Sbjct: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 212

[Close]

BLAST of Pay0009028 vs. NCBI nr
Match: XP_004143458.1 (polyadenylate-binding protein 3 isoform X1 [Cucumis sativus] >KGN48735.1 hypothetical protein Csa_003260 [Cucumis sativus])

HSP 1 Score: 414.5 bits (1064), Expect = 5.7e-112
Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MEEEEHEVYGGEIPVEEGDIDMSATDDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
           HPKGFAYVEFVEAEA+QEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS
Sbjct: 121 HPKGFAYVEFVEAEAIQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 212

[Close]

BLAST of Pay0009028 vs. NCBI nr
Match: XP_038882559.1 (polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 209/212 (98.58%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           M+EEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MDEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
           HPKGFAYVEFVEAEAVQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYRS
Sbjct: 121 HPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 212

[Close]

BLAST of Pay0009028 vs. NCBI nr
Match: KAG6594888.1 (Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 22  MDEEEHEVYGGEIPVEEGDVDMTAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 81

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 82  MGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 141

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
            PKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRS
Sbjct: 142 QPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRS 201

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPY GYGKTPR+RRPMRYMPYY
Sbjct: 202 RRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY 232

[Close]

BLAST of Pay0009028 vs. NCBI nr
Match: KAG7026854.1 (Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 200/212 (94.34%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60
           M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE
Sbjct: 1   MDEEEHEVYGGEIPVEEGDVDMNAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKE 60

Query: 61  MGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120
           MGAVQDPAG+ VSQESKEE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 61  MGAVQDPAGAVVSQESKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 120

Query: 121 HPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRS 180
            PKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRS
Sbjct: 121 QPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRS 180

Query: 181 RRPYVPPYFYSPYGGYGKTPRFRRPMRYMPYY 213
           RRPYVPPYFYSPY GYGKTPR+RRPMRYMPYY
Sbjct: 181 RRPYVPPYFYSPY-GYGKTPRYRRPMRYMPYY 211

[Close]

BLAST of Pay0009028 vs. TAIR 10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-92
Identity = 177/217 (81.57%), Postives = 188/217 (86.64%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQ 60
           MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQ
Sbjct: 1   MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 61  AKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTI 120
           AKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61  AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 121 LTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNP 180
           L DKFG PKGFAYVEFVE EAVQEAL LNE+ELHGRQLKV  KRTNVPGMKQY P R+NP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180

Query: 181 YMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY 212
            MGYR RRP+VPPYFYSPY GYGK PRFRRPMRYMPY
Sbjct: 181 SMGYRFRRPFVPPYFYSPY-GYGKAPRFRRPMRYMPY 216

[Close]

BLAST of Pay0009028 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 326.6 bits (836), Expect = 1.4e-89
Identity = 174/221 (78.73%), Postives = 189/221 (85.52%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAAL 60
           MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAAL
Sbjct: 1   MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60

Query: 61  REMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVN 120
           REMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNVDYACTPEEVQQHFQ+CGTV+
Sbjct: 61  REMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVH 120

Query: 121 RVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQ 180
           RVTILTDKFG PKGFAYVEFVE EAVQEAL LNE+ELHGRQLKV QKRTNVPG+KQ+  +
Sbjct: 121 RVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGR 180

Query: 181 RYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY 212
           R+NPYMGYR RRP++ PY YSPY GYGK PRFRRPMRYMPY
Sbjct: 181 RFNPYMGYRFRRPFMSPYMYSPY-GYGKAPRFRRPMRYMPY 219

[Close]

BLAST of Pay0009028 vs. TAIR 10
Match: AT5G10350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 308.9 bits (790), Expect = 3.1e-84
Identity = 164/203 (80.79%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 1   MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQ 60
           MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQ
Sbjct: 1   MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60

Query: 61  AKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTI 120
           AKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61  AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

Query: 121 LTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNP 180
           L DKFG PKGFAYVEFVE EAVQEAL LNE+ELHGRQLKV  KRTNVPGMKQY P R+NP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180

Query: 181 YMGYRSRRPYVPPYFYSPYGGYG 198
            MGYR RRP+VPPYFYSPY GYG
Sbjct: 181 SMGYRFRRPFVPPYFYSPY-GYG 202

[Close]

BLAST of Pay0009028 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 260.0 bits (663), Expect = 1.7e-69
Identity = 149/228 (65.35%), Postives = 173/228 (75.88%), Query Frame = 0


Query: 2   EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEM 61
           +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+
Sbjct: 5   DEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEI 64

Query: 62  EEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHF 121
           EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSRS++VGNVDYACTPEEVQQHF
Sbjct: 65  EEEAGALREMQAKAEKDMGASQDPSG-GVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHF 124

Query: 122 QSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPG 181
           QSCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNE+ELHGRQ+KV  KRTNVPG
Sbjct: 125 QSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPG 184

Query: 182 MKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGGYGKTPRFRRPMRYMPY 212
           M+Q F  R  P+   R   P VP  FY PY  YG+ PRFRRPMRY PY
Sbjct: 185 MRQ-FRGRGRPFRPMRGFMPGVP--FYPPY-AYGRVPRFRRPMRYRPY 227

[Close]

BLAST of Pay0009028 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 239.2 bits (609), Expect = 3.0e-63
Identity = 147/265 (55.47%), Postives = 171/265 (64.53%), Query Frame = 0


Query: 2   EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEM 61
           +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+
Sbjct: 5   DEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEI 64

Query: 62  EEEAAALREMQAKVEKEMGAVQ-------------------------------------D 121
           EEEA ALREMQAK EK+MGA Q                                     +
Sbjct: 65  EEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNLSRNLLEFEYEKE 124

Query: 122 PAGSAVSQESKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFA 181
              S VS   KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFA
Sbjct: 125 IINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFA 184

Query: 182 YVEFVEAEAVQEALLLNETELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVP 212
           YVEFVE EAVQ +L+LNE+ELHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P VP
Sbjct: 185 YVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQ-FRGRGRPFRPMRGFMPGVP 244

The following BLAST results are available for this feature:

BLAST of Pay0009028 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX90	2.0e-91	81.57	Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV...	[more]
Q9FJN9	2.0e-88	78.73	Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV...	[more]
Q93VI4	2.3e-68	65.35	Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV...	[more]
O14327	2.1e-32	52.30	Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q28165	7.9e-32	46.86	Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3	[more]

BLAST of Pay0009028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2C2	7.2e-113	100.00	Polyadenylate-binding protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KG83	2.7e-112	99.06	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G499790 PE=4 SV...	[more]
A0A6J1HIK8	1.7e-106	94.34	polyadenylate-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1KVH8	2.2e-106	94.34	polyadenylate-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111496810...	[more]
A0A6J1BTY4	5.0e-106	94.81	polyadenylate-binding protein 3-like isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Pay0009028 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036316.1	1.5e-112	100.00	polyadenylate-binding protein 2-like [Cucumis melo var. makuwa] >TYK12710.1 poly...	[more]
XP_004143458.1	5.7e-112	99.06	polyadenylate-binding protein 3 isoform X1 [Cucumis sativus] >KGN48735.1 hypothe...	[more]
XP_038882559.1	3.7e-111	98.58	polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]	[more]
KAG6594888.1	3.6e-106	94.34	Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7026854.1	3.6e-106	94.34	Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Pay0009028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10350.1	1.4e-92	81.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	1.4e-89	78.73	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G10350.2	3.1e-84	80.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.1	1.7e-69	65.35	polyadenylate-binding protein 1	[more]
AT5G51120.2	3.0e-63	55.47	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 1..210
None	No IPR available	PANTHER	PTHR23236:SF79	SUBFAMILY NOT NAMED	coord: 1..210
None	No IPR available	CDD	cd12306	RRM_II_PABPs	coord: 84..154 e-value: 2.65093E-48 score: 150.905
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 84..155 e-value: 2.0E-22 score: 90.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 85..153 e-value: 1.0E-16 score: 60.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 83..159 score: 17.233515
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 21..156 e-value: 6.6E-29 score: 102.7
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 75..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0009028.1	Pay0009028.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding