Pay0008561 (gene) Melon (Payzawat) v1

Overview
NamePay0008561
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptiontranscription factor RAX2-like
Locationchr02: 1655478 .. 1656680 (-)
RNA-Seq ExpressionPay0008561
SyntenyPay0008561
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAAGCTTCCATCCATGGCAGCCCTCTCTCTGTAATCTCTCTCTCTCTCTCTTTTTCTTTCTTCAATCTCCATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGATGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGTTCTCGTTTCGTAACCATTTTATCTGTCTTAAGCTTTCGGGTTCGTTAGTGATGTACGAGTTTTTTTCTTTCTTTCTAGGGCTTAATCGATGCGGGAAGAGCTGCCGGCTAAGGTGGCTGAATTATCTCCGACCTGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGCAAGTTTTTTTCTTTCTTTTTTAGCTTCTTTTACAAATAGGATTTGATCATTTTCTTTATGATTATAAACCAACTTGATGGAAAATTACTTGTTTGAAAATTTGATTTTGATAATGAAAGGCAGTGCGAAGAAGTAGTAGAGGTATAACAAAAGAAAGAAATTAATGGAGGAAAAAAATGTTAGTTTTTGAGATGTGATATGAAATGTAGTGATTTGTTTTAATTTAGGTGGGCGATAATTGCATCACAATTACCTGGAAGAACAGACAATGACGTGAAAAACCACTGGAATACCAAGTTAAAGAAGAAGTTCAATAATTCACTCTCTGAACCACCAAATTCCACCATGATTGTTACCGACCCGTCGCGATATTCCTCAACGACTGCAAATTCCTTAAAAGTACTCCATAATGATCATGAACACAACATCAACACCAACTATAACATGTTTTCAAGCCATCCTCGTTTTGATCAAATTCCAATGTTGAACAACAACAATAATCCAATAATACCAGAATTATCCACTTCCTCATCTTCAATTTCATTACCCAATATCGAGCAAAACCACCTCGAAGAATTTTCCGGTCTCGGCTCCGACGAGGCGGAAATCATCCTACAAAGTTATTTCCATGGGGTTTATGATTATAATCAATACCCATATGAAGATGATGTTATGGAAGGATTTGGTGTAAGTAATTATATGGGATTATGATGATGATGATTATAATTAATATTAATCAATTAATTAGAATTGTTGAGGACTTGGTCAAAAGAGAAAAGGAC

mRNA sequence

CAAAAAGCTTCCATCCATGGCAGCCCTCTCTCTGTAATCTCTCTCTCTCTCTCTTTTTCTTTCTTCAATCTCCATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGATGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGGCTTAATCGATGCGGGAAGAGCTGCCGGCTAAGGTGGCTGAATTATCTCCGACCTGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGTGGGCGATAATTGCATCACAATTACCTGGAAGAACAGACAATGACGTGAAAAACCACTGGAATACCAAGTTAAAGAAGAAGTTCAATAATTCACTCTCTGAACCACCAAATTCCACCATGATTGTTACCGACCCGTCGCGATATTCCTCAACGACTGCAAATTCCTTAAAAGTACTCCATAATGATCATGAACACAACATCAACACCAACTATAACATGTTTTCAAGCCATCCTCGTTTTGATCAAATTCCAATGTTGAACAACAACAATAATCCAATAATACCAGAATTATCCACTTCCTCATCTTCAATTTCATTACCCAATATCGAGCAAAACCACCTCGAAGAATTTTCCGGTCTCGGCTCCGACGAGGCGGAAATCATCCTACAAAGTTATTTCCATGGGGTTTATGATTATAATCAATACCCATATGAAGATGATGTTATGGAAGGATTTGGTGTAAGTAATTATATGGGATTATGATGATGATGATTATAATTAATATTAATCAATTAATTAGAATTGTTGAGGACTTGGTCAAAAGAGAAAAGGAC

Coding sequence (CDS)

ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGATGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGGCTTAATCGATGCGGGAAGAGCTGCCGGCTAAGGTGGCTGAATTATCTCCGACCTGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGTGGGCGATAATTGCATCACAATTACCTGGAAGAACAGACAATGACGTGAAAAACCACTGGAATACCAAGTTAAAGAAGAAGTTCAATAATTCACTCTCTGAACCACCAAATTCCACCATGATTGTTACCGACCCGTCGCGATATTCCTCAACGACTGCAAATTCCTTAAAAGTACTCCATAATGATCATGAACACAACATCAACACCAACTATAACATGTTTTCAAGCCATCCTCGTTTTGATCAAATTCCAATGTTGAACAACAACAATAATCCAATAATACCAGAATTATCCACTTCCTCATCTTCAATTTCATTACCCAATATCGAGCAAAACCACCTCGAAGAATTTTCCGGTCTCGGCTCCGACGAGGCGGAAATCATCCTACAAAGTTATTTCCATGGGGTTTATGATTATAATCAATACCCATATGAAGATGATGTTATGGAAGGATTTGGTGTAAGTAATTATATGGGATTATGA

Protein sequence

MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLNYLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNSLSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNNPIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYDYNQYPYEDDVMEGFGVSNYMGL
Homology
BLAST of Pay0008561 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-56
Identity = 100/160 (62.50%), Postives = 130/160 (81.25%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSP+EDA L  +I K GTGGNWIALPHKAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRP+I+HG FT+EEDN+I SL+++IGSRW++IA+ L GRTDND+KN+WNTKLKKK   +
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 LSEPPNSTM-IVTDPSRYSSTTANSLKVLHNDHEHNINTN 160
           ++ PP+  + I T  S  S ++++   ++++   +N +TN
Sbjct: 121 MAPPPHHHLAIATSSSSASPSSSSHYNMINSLLPYNPSTN 160

BLAST of Pay0008561 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-56
Identity = 93/119 (78.15%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+EDA L ++I   GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNN 120
           YLRP+IKHGGF++EE+N+ICSLY TIGSRW+IIA+QLPGRTDND+KN+WNT+LKKK  N
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLIN 119

BLAST of Pay0008561 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.9e-55
Identity = 97/163 (59.51%), Postives = 126/163 (77.30%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDK +VK+GPWS +EDA L ++I KHGTG NWI+LP + G+ RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRP++KHGGFT EED +ICSLY TIGSRW+IIASQLPGRTDND+KN+WNT+LKKK  + 
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 LSEPPNSTMIV--TDPSRYSSTTANSLKVLHNDHEHNINTNYN 162
             +  +  + V     +  SS++ N +++ H+++  +  T YN
Sbjct: 121 QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYN 163

BLAST of Pay0008561 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.5e-53
Identity = 104/185 (56.22%), Postives = 130/185 (70.27%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+ED  L  +I K+GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRP+IKHGGF++EED +I SLY +IGSRW+IIA+QLPGRTDND+KN+WNTKLKKK    
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFD--QIPMLNNN 180
             +  N    +TD +  + +  N+ K      ++  N+       H +    Q P  +  
Sbjct: 121 -QKQMNRQDSITDSTENNLSNNNNNK----SPQNLSNSALERLQLHMQLQNLQSPFSSFY 180

Query: 181 NNPII 184
           NNPI+
Sbjct: 181 NNPIL 180

BLAST of Pay0008561 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52
Identity = 89/129 (68.99%), Postives = 108/129 (83.72%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDK  VKRGPWSP+ED+ L  +I K+G GGNWI+ P KAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRP+IKHG F++EED +I SL++ IGSRW+IIA+ LPGRTDND+KN+WNTKL+KK  +S
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120

Query: 121 LSEPPNSTM 130
            S+  +S M
Sbjct: 121 SSDSSSSAM 129

BLAST of Pay0008561 vs. ExPASy TrEMBL
Match: A0A1S3BPH8 (transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.2e-144
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120

Query: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN 180
           LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN
Sbjct: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN 180

Query: 181 PIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYDYNQYPYEDDVMEG 240
           PIIPELSTSSSSISLPNIEQNHLEEFSG GSDEAEIILQSYFHGVYDYNQYPYEDDVMEG
Sbjct: 181 PIIPELSTSSSSISLPNIEQNHLEEFSGPGSDEAEIILQSYFHGVYDYNQYPYEDDVMEG 240

Query: 241 FGVSNYMGL 250
           FGVSNYMGL
Sbjct: 241 FGVSNYMGL 249

BLAST of Pay0008561 vs. ExPASy TrEMBL
Match: A0A0A0LZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.1e-124
Identity = 225/251 (89.64%), Postives = 235/251 (93.63%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWA+IASQLPGRTDNDVKNHWNTKLKKKFN+S
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120

Query: 121 LSEPPNSTMIVTDPSRYSST-TANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNN 180
            S+PPN  ++VTDP RYS+T TANSLK LH+DHEHNINTN+NMFSSHP FDQIPMLNNNN
Sbjct: 121 FSKPPNPIVVVTDPPRYSATSTANSLK-LHDDHEHNINTNFNMFSSHPPFDQIPMLNNNN 180

Query: 181 NPIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYD-YNQYPYEDDVM 240
           NPIIPELSTSSSSISLP IEQNHL EFSG  SDEA  ILQSYFHGVY+  NQYPYEDDVM
Sbjct: 181 NPIIPELSTSSSSISLP-IEQNHL-EFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVM 240

Query: 241 EGFGVSNYMGL 250
           +GF VSNYMGL
Sbjct: 241 DGFDVSNYMGL 248

BLAST of Pay0008561 vs. ExPASy TrEMBL
Match: A0A6J1CVC2 (transcription factor RAX2-like OS=Momordica charantia OX=3673 GN=LOC111014545 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.2e-69
Identity = 146/250 (58.40%), Postives = 170/250 (68.00%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL  +IHKHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKNYIHKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHG FT+EED+VIC+LYS+IGSRWA+IASQLPGRTDNDVKNHWNTKLKKKF NS
Sbjct: 61  YLRPDIKHGSFTEEEDSVICTLYSSIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKF-NS 120

Query: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN 180
           +SE PN T+     +               D  HN  T+    ++ P F    +L   + 
Sbjct: 121 VSETPNPTVAAAAAAA-------------ADGHHNATTDITFPANTPLFPNANIL--FST 180

Query: 181 PIIPELSTSSSSISLPNIEQNHLE-EFSGLGSDEAEIILQSYFHGVYDYNQYPYEDDVME 240
           P+  +     +    P  EQ  +    +G GSD+ EI+L       Y + QYPYED + E
Sbjct: 181 PLNFDPQEFPTMDRFPTTEQTQIPFSGNGGGSDDGEILLS------YGFYQYPYEDHLAE 228

Query: 241 G-FGVSNYMG 249
           G F VS YMG
Sbjct: 241 GLFDVSYYMG 228

BLAST of Pay0008561 vs. ExPASy TrEMBL
Match: A0A6J1F5Y4 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111441129 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 7.5e-69
Identity = 149/251 (59.36%), Postives = 169/251 (67.33%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL AFIHKHGT GNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHGGFT EEDN+IC+LYST+GSRWA+IASQLPGRTDNDVKNHWNTKLKKKFN+ 
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSF 120

Query: 121 LSEPPNSTMIVTDPSRYS-----------STTANSLKVLHNDHEHNINTNYNMFSSHPRF 180
              P  +    T  +  +           S  A+ +++      + +  + N    H   
Sbjct: 121 SERPAPTIAAATQQNAITNMAFPANAPPYSAAADWIRLDEQMDGNLMFADANFDFKHDPE 180

Query: 181 DQIPMLNNNNNPIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYDYN 240
           DQ PML N       ELSTSSS+ SLP IEQN L      G +  E +L       Y + 
Sbjct: 181 DQFPMLWNPQ-----ELSTSSSNSSLP-IEQNQLP----FGGNAGEALLS------YGFY 234

BLAST of Pay0008561 vs. ExPASy TrEMBL
Match: A0A6J1KT76 (transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111498442 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.2e-68
Identity = 148/251 (58.96%), Postives = 169/251 (67.33%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL AFIHKHGT GNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHGGFT EEDN+IC+LYST+GSRWA+IASQLPGRTDNDVKNHWNTKLKKKFN+ 
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSF 120

Query: 121 LSEPPNSTMIVTDPSRYS-----------STTANSLKVLHNDHEHNINTNYNMFSSHPRF 180
                 +   VT  +  +           S  A+ L+       + +  + N    H   
Sbjct: 121 SERSAPTIAAVTQQNAITNMAFPANAPPYSAAADWLRFDEQMDGNLMFADANFDFKHDPE 180

Query: 181 DQIPMLNNNNNPIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYDYN 240
           DQ PML N       ELSTSSS+ SLP +EQN +      G ++ E +L       Y + 
Sbjct: 181 DQFPMLWNPQ-----ELSTSSSNSSLP-VEQNQVP----FGGNDGETVLS------YGFY 234

BLAST of Pay0008561 vs. NCBI nr
Match: XP_008450812.1 (PREDICTED: transcription factor RAX2-like [Cucumis melo])

HSP 1 Score: 520.8 bits (1340), Expect = 6.6e-144
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120

Query: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN 180
           LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN
Sbjct: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN 180

Query: 181 PIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYDYNQYPYEDDVMEG 240
           PIIPELSTSSSSISLPNIEQNHLEEFSG GSDEAEIILQSYFHGVYDYNQYPYEDDVMEG
Sbjct: 181 PIIPELSTSSSSISLPNIEQNHLEEFSGPGSDEAEIILQSYFHGVYDYNQYPYEDDVMEG 240

Query: 241 FGVSNYMGL 250
           FGVSNYMGL
Sbjct: 241 FGVSNYMGL 249

BLAST of Pay0008561 vs. NCBI nr
Match: XP_004135811.1 (LOW QUALITY PROTEIN: transcription factor RAX2 [Cucumis sativus] >XP_031745742.1 transcription factor RAX2-like [Cucumis sativus] >KAE8637464.1 hypothetical protein CSA_004497 [Cucumis sativus])

HSP 1 Score: 454.9 bits (1169), Expect = 4.4e-124
Identity = 225/251 (89.64%), Postives = 235/251 (93.63%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWA+IASQLPGRTDNDVKNHWNTKLKKKFN+S
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120

Query: 121 LSEPPNSTMIVTDPSRYSST-TANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNN 180
            S+PPN  ++VTDP RYS+T TANSLK LH+DHEHNINTN+NMFSSHP FDQIPMLNNNN
Sbjct: 121 FSKPPNPIVVVTDPPRYSATSTANSLK-LHDDHEHNINTNFNMFSSHPPFDQIPMLNNNN 180

Query: 181 NPIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYD-YNQYPYEDDVM 240
           NPIIPELSTSSSSISLP IEQNHL EFSG  SDEA  ILQSYFHGVY+  NQYPYEDDVM
Sbjct: 181 NPIIPELSTSSSSISLP-IEQNHL-EFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVM 240

Query: 241 EGFGVSNYMGL 250
           +GF VSNYMGL
Sbjct: 241 DGFDVSNYMGL 248

BLAST of Pay0008561 vs. NCBI nr
Match: KAE8653405.1 (hypothetical protein Csa_007455 [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 1.1e-90
Identity = 190/254 (74.80%), Postives = 202/254 (79.53%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAG--LNRCGKSCRLRW 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKA   LN      R   
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKADQILNMEVSLKRKIM 60

Query: 61  LNYLR-PDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKF 120
           L  L  P ++ G F          L       WA+IASQLPGRTDNDVKNHWNTKLKKKF
Sbjct: 61  LFVLSIPPLEVGKF----------LLRLQIKLWAVIASQLPGRTDNDVKNHWNTKLKKKF 120

Query: 121 NNSLSEPPNSTMIVTDPSRYSST-TANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLN 180
           N+S S+PPN  ++VTDP RYS+T TANSLK LH+DHEHNINTN+NMFSSHP FDQIPMLN
Sbjct: 121 NSSFSKPPNPIVVVTDPPRYSATSTANSLK-LHDDHEHNINTNFNMFSSHPPFDQIPMLN 180

Query: 181 NNNNPIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYD-YNQYPYED 240
           NNNNPIIPELSTSSSSISLP IEQNHL EFSG  SDEA  ILQSYFHGVY+  NQYPYED
Sbjct: 181 NNNNPIIPELSTSSSSISLP-IEQNHL-EFSGPSSDEAADILQSYFHGVYENNNQYPYED 240

Query: 241 DVMEGFGVSNYMGL 250
           DVM+GF VSNYMGL
Sbjct: 241 DVMDGFDVSNYMGL 241

BLAST of Pay0008561 vs. NCBI nr
Match: XP_022145017.1 (transcription factor RAX2-like [Momordica charantia])

HSP 1 Score: 273.1 bits (697), Expect = 2.4e-69
Identity = 146/250 (58.40%), Postives = 170/250 (68.00%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL  +IHKHGTGGNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKNYIHKHGTGGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHG FT+EED+VIC+LYS+IGSRWA+IASQLPGRTDNDVKNHWNTKLKKKF NS
Sbjct: 61  YLRPDIKHGSFTEEEDSVICTLYSSIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKF-NS 120

Query: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNNN 180
           +SE PN T+     +               D  HN  T+    ++ P F    +L   + 
Sbjct: 121 VSETPNPTVAAAAAAA-------------ADGHHNATTDITFPANTPLFPNANIL--FST 180

Query: 181 PIIPELSTSSSSISLPNIEQNHLE-EFSGLGSDEAEIILQSYFHGVYDYNQYPYEDDVME 240
           P+  +     +    P  EQ  +    +G GSD+ EI+L       Y + QYPYED + E
Sbjct: 181 PLNFDPQEFPTMDRFPTTEQTQIPFSGNGGGSDDGEILLS------YGFYQYPYEDHLAE 228

Query: 241 G-FGVSNYMG 249
           G F VS YMG
Sbjct: 241 GLFDVSYYMG 228

BLAST of Pay0008561 vs. NCBI nr
Match: KAG6588016.1 (Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.6 bits (693), Expect = 7.0e-69
Identity = 153/252 (60.71%), Postives = 169/252 (67.06%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL AFIHKHGT GNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRPDIKHGGFT EEDN+IC+LYST+GSRWA+IASQLPGRTDNDVKNHWNTKLKKKF NS
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDVKNHWNTKLKKKF-NS 120

Query: 121 LSEPPNSTMIVTDPSRY------------SSTTANSLKVLHNDHEHNINTNYNMFSSHPR 180
            SE P  TM                     S  A+ +++      + +  + N    H  
Sbjct: 121 FSERPAPTMAAATQQNAITNMAFPANAPPYSAAADWIRLDEQMDGNLMFADANFDFKHDP 180

Query: 181 FDQIPMLNNNNNPIIPELSTSSSSISLPNIEQNHLEEFSGLGSDEAEIILQSYFHGVYDY 240
            DQ PML N       ELSTSSS+ SLP IEQN L      G +  E +L       Y +
Sbjct: 181 EDQFPMLWNPQ-----ELSTSSSNSSLP-IEQNQLP----FGGNAGEALLS------YGF 234

BLAST of Pay0008561 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.0e-57
Identity = 100/160 (62.50%), Postives = 130/160 (81.25%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSP+EDA L  +I K GTGGNWIALPHKAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRP+I+HG FT+EEDN+I SL+++IGSRW++IA+ L GRTDND+KN+WNTKLKKK   +
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 LSEPPNSTM-IVTDPSRYSSTTANSLKVLHNDHEHNINTN 160
           ++ PP+  + I T  S  S ++++   ++++   +N +TN
Sbjct: 121 MAPPPHHHLAIATSSSSASPSSSSHYNMINSLLPYNPSTN 160

BLAST of Pay0008561 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-57
Identity = 93/119 (78.15%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+EDA L ++I   GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNN 120
           YLRP+IKHGGF++EE+N+ICSLY TIGSRW+IIA+QLPGRTDND+KN+WNT+LKKK  N
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLIN 119

BLAST of Pay0008561 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 218.8 bits (556), Expect = 5.0e-57
Identity = 93/119 (78.15%), Postives = 107/119 (89.92%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+EDA L  +I   GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNN 120
           YLRP+IKHGGF++EEDN+IC+LY TIGSRW+IIA+QLPGRTDND+KN+WNT+LKKK  N
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLN 119

BLAST of Pay0008561 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 )

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-56
Identity = 97/163 (59.51%), Postives = 126/163 (77.30%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDK +VK+GPWS +EDA L ++I KHGTG NWI+LP + G+ RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRP++KHGGFT EED +ICSLY TIGSRW+IIASQLPGRTDND+KN+WNT+LKKK  + 
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 LSEPPNSTMIV--TDPSRYSSTTANSLKVLHNDHEHNINTNYN 162
             +  +  + V     +  SS++ N +++ H+++  +  T YN
Sbjct: 121 QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYN 163

BLAST of Pay0008561 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 208.4 bits (529), Expect = 6.7e-54
Identity = 104/185 (56.22%), Postives = 130/185 (70.27%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+ED  L  +I K+GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120
           YLRP+IKHGGF++EED +I SLY +IGSRW+IIA+QLPGRTDND+KN+WNTKLKKK    
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 LSEPPNSTMIVTDPSRYSSTTANSLKVLHNDHEHNINTNYNMFSSHPRFD--QIPMLNNN 180
             +  N    +TD +  + +  N+ K      ++  N+       H +    Q P  +  
Sbjct: 121 -QKQMNRQDSITDSTENNLSNNNNNK----SPQNLSNSALERLQLHMQLQNLQSPFSSFY 180

Query: 181 NNPII 184
           NNPI+
Sbjct: 181 NNPIL 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SJL71.4e-5662.50Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1[more]
Q9M2Y94.1e-5678.15Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1[more]
F4JSU05.9e-5559.51Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1[more]
Q9FKL29.5e-5356.22Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1[more]
Q9FG682.1e-5268.99Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3BPH83.2e-14499.60transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1[more]
A0A0A0LZB22.1e-12489.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1[more]
A0A6J1CVC21.2e-6958.40transcription factor RAX2-like OS=Momordica charantia OX=3673 GN=LOC111014545 PE... [more]
A0A6J1F5Y47.5e-6959.36transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111441129 PE... [more]
A0A6J1KT762.2e-6858.96transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111498442 PE=4 ... [more]
Match NameE-valueIdentityDescription
XP_008450812.16.6e-14499.60PREDICTED: transcription factor RAX2-like [Cucumis melo][more]
XP_004135811.14.4e-12489.64LOW QUALITY PROTEIN: transcription factor RAX2 [Cucumis sativus] >XP_031745742.1... [more]
KAE8653405.11.1e-9074.80hypothetical protein Csa_007455 [Cucumis sativus][more]
XP_022145017.12.4e-6958.40transcription factor RAX2-like [Momordica charantia][more]
KAG6588016.17.0e-6960.71Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
AT2G36890.11.0e-5762.50Duplicated homeodomain-like superfamily protein [more]
AT3G49690.12.9e-5778.15myb domain protein 84 [more]
AT5G65790.15.0e-5778.15myb domain protein 68 [more]
AT4G37780.14.2e-5659.51myb domain protein 87 [more]
AT5G57620.16.7e-5456.22myb domain protein 36 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..64
e-value: 2.6E-11
score: 53.6
coord: 67..115
e-value: 2.8E-11
score: 53.5
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 9..62
score: 10.638367
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 63..113
score: 9.674538
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 71..113
e-value: 1.77655E-8
score: 47.5702
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 16..62
e-value: 1.63962E-8
score: 47.5702
NoneNo IPR availableGENE3D1.10.10.60coord: 7..68
e-value: 8.4E-18
score: 66.0
NoneNo IPR availableGENE3D1.10.10.60coord: 70..152
e-value: 3.7E-20
score: 73.7
NoneNo IPR availablePANTHERPTHR48000:SF36OS09G0431300 PROTEINcoord: 1..171
NoneNo IPR availablePANTHERPTHR48000OS09G0431300 PROTEINcoord: 1..171
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 69..111
e-value: 1.9E-10
score: 40.8
coord: 14..62
e-value: 1.0E-13
score: 51.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 63..117
score: 20.735415
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 9..62
score: 14.218505
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0008561.1Pay0008561.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding