Pay0008460 (gene) Melon (Payzawat) v1

Overview


Name	Pay0008460
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Thioredoxin domain-containing protein
Location	chr06: 26562739 .. 26565444 (+)
RNA-Seq Expression	Pay0008460
Synteny	Pay0008460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGTTGTATTTCTACAATCTTGACGTTATTTTTCTTTTGTACTCCAATGTTTGTATTGTACTTTGTACCTGTATGATTCCTAGATGTAGTGAAATACATTTAAAATCTTTTAGATTAAATTTAGATAGCCAAAATTTTCTTTAAAAAAATGTACTAAAAGTTTACGTAACCGCATTGTATGTATCAGTTGTATTAATGACTGTGATGCCTTCAACTTTGGCCCTTCGCATGAGTCCAGGATGCAGTTGAATTTGGAATTTAAGTTGGAGTTGTGAAAGTTGAAGATCCAAATCTGACTTACGACTTAATTATTGTAAGAACGCCACTTGTCAATCAATGTGTTAAAGTTCCATTGGTCCGTGTTTGAACTTGGATCAACGTCACGGTGCGCCACTCCCCAGCACCCTCATCCATTCGTCCTCCATTCATTGACACATCAAACCAAAAACCCAATTCCCCAATTTTGCCCAAACCTCTCTCTCTCTCCCCCTCACTAACTCACAACCACCATCACCACCCATCAATCCCTTCCTCCGATGGCGACGGTTCACGATTCCCTCACTCTTTCTTGTTCATCCGCCTTCGCTTCCACCGCTTTCTCTGCCCGTCGCACCCCCGTTTCTCGTCCGTAGTGCAGAGGCTTGAAGATCGCACACAGCTTCACTTCTCACTCTCTACGATCTGCCAGATCCAATGCTAGATTTCCTCACCGTTCTGCAACTATTGTTTATGAAGCTCAAGAAACTGCTGCCATTTGTTGGGATTTTGTTCTCCTATTTTCTCTTACTGTCGTTTTTCTCTTGTTTGGATAAACGAGGGAATGAAACTTTTGACGAAATTTGGATGTTTCGTGGATTTAAGATCACGTTCTTTGTAGCTATTGGTGTTTATTTTGGTTTGATTTGGTTTAGATACTTATGAAACTCGACGTGTGCGATTAGTAAATAATATGTTAAAGCACCTCTAGAGTTATGACTTATAGCGTTAGATCATGACGAATTTAACTTTTTATGTATATGCATAATATAAAATTAGAGCGAAAGTGGAAGAAGTAACTAAAAAGGAAGTCAGTTTGGTGGATTGATGCTGACATGTTATAACAGATCATTTCCTATTTGAATTTATGTACTTGTCAATATTCCTTCCATATCCTTGCATTTGCTTTGATCTGAATGTAAAATTTAGTGATACTAAATTAGGATGAACCTGCTGTCCTATTTAGAATGGCTTCTAATTGCTTTCATCAAACTCTACAAAAAGTCATTGTAAATAGGCTCTAAATTGGGCTGTAGAGATGTGTTTCCATTTTGAAGTGAAAGCTTGAGCTTTAAAATTTCTAACGACTTAATACATTGACCATATATTATTACCCGAGATGATGCCTTAGGCAATCAGTGAACAGCGAACACCCAATTGGTGAGTGACAGACCAATTTTGTCAACAAATCCTTGAAAGGGACCTGTGCTTGTAAGAGAGGGAGGTTGTCACTAAGCATTAGGAGTAATAGTTGCTGATTGAGAAGATGGTTTCTGTCGTGCCTGAGTCTTAATGATGCTACTAAGAATGATCAGTAGGGAGCTGGTCTGATATTGGCTCAATATGTTGGGACAAAATGCCCCATTTATCTTTCTCTCTTGTGTCCTGTTCTCCCATCCCACAGTTTTCGTGTGTTTCTGTATGCAACTTGATTTATTTTATTGTATGGCATCGAATTCTGAGTTTTAACAATCGGTTTAAGTATTAACATTGAAATGATAATAGTGCGTGTGTTAATGGTTGTCATTCCAACATATTGCATTTTAATTGTTATTCTGCATGATTGGTTTGAAATAAAAGCTCTCGAACTATCGAAATGGTTAAGAAATGGTACATTTCAGCTATCTTTATATTCTCTTATACAAGCATGCCCAAGTACACACTTTTGTATGTAGTGTATATAGTTCATAATTGTTTGTTTGGTTGCTAGTCCTTTTTTCTTTTACTAATTTGATTACAGAATTCCATTTGTTTTTGTATTGGGGGTTTGCTTGTATAGAAATTTTCCATGTCTGCTTCCATATACCCAACATTTATTTTATTTATGAGATCATGGGGAGACGACTTTTGAAAATTTCTGTTTGAACCTTAAGAATTTCTGACATTTTAAACTGAATTTGTGTTCAGATCTCTGTATCATTGTTTATACTTATACTCGATCACTTGATGTGATGTTATATTAATTCGAGAGAGGCAAAATACTCATTTATGTTAGTATATTCGTCATAGGAATTTGTTATCCATAAAATAATTTTTTAATTTAAGCTCTCTTTCGACTCTTCTCTGCTGCCTACCTCATTGGAGGTCGATAATATTACCTGCACCTACTCTTTCTCTCCTCGAAAAAGCATTATTAGTTAATTGAAATTGCATGTTCCTTGAATGTTGCAGTACCTGCTGCTCTAGAAGCTACCTGGCAGTCACAAGTTATAGAATCTAAATTGCCCGTCATAGTTGAATTTTGGGCTTCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCATTGATGATCTGTCAAAAGAGTATGAAGGAAAGTTTAAATTTTACAAGGTGGATACTGATAACAACTCTTCGATTGCATCCCGATATGGTATCAGAAGGAGGCAATAATAGGTGCAGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAG

mRNA sequence

ATGGATTGTTGTATTTCTACAATCTTGACATCCAATGCTAGATTTCCTCACCGTTCTGCAACTATTGTTTATGAAGCTCAAGAAACTGCTGCCATTTTACCTGCTGCTCTAGAAGCTACCTGGCAGTCACAAGTTATAGAATCTAAATTGCCCGTCATAGTTGAATTTTGGGCTTCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCATTGATGATCTGTCAAAAGAGTATGAAGGAAAGTTTAAATTTTACAAGGTGGATACTGATAACAACTCTTCGATTGCATCCCGATATGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAG

Coding sequence (CDS)

ATGGATTGTTGTATTTCTACAATCTTGACATCCAATGCTAGATTTCCTCACCGTTCTGCAACTATTGTTTATGAAGCTCAAGAAACTGCTGCCATTTTACCTGCTGCTCTAGAAGCTACCTGGCAGTCACAAGTTATAGAATCTAAATTGCCCGTCATAGTTGAATTTTGGGCTTCATGGTGCGGTCCTTGCCGCATGATTCATCCGATCATTGATGATCTGTCAAAAGAGTATGAAGGAAAGTTTAAATTTTACAAGGTGGATACTGATAACAACTCTTCGATTGCATCCCGATATGTTCCTAAAGCAACTTTGACAGCCAGCATGGAAAAATTCTTGTAG

Protein sequence

MDCCISTILTSNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRYVPKATLTASMEKFL

Homology

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BLAST of Pay0008460 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 3.6e-23
Identity = 56/127 (44.09%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 12  NARFPHRSATIV--YEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHP 71
           N R   R A++V   + Q+T+  +P   ++TWQS V+ES+LPV+V +WA+WCGPC+MI P
Sbjct: 52  NRRGGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDP 111

Query: 72  IIDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLT 114
           ++  LSKEYEGK K YK++TD N  IAS+Y                       VP++TL 
Sbjct: 112 VVGKLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLI 171

[Close]

BLAST of Pay0008460 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 7.9e-23
Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 18  RSATIVYEAQETAAI---LPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDL 77
           R   I  EAQ+T A    +P   ++ WQ++V+ES +PV+VEFWA WCGPCRMIHPI+D L
Sbjct: 70  RGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQL 129

Query: 78  SKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTASMEK 114
           +K++ GKFKFYK++TD + + A+RY                       VP+ TL  ++E+
Sbjct: 130 AKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIER 189

[Close]

BLAST of Pay0008460 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-22
Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 19  SATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDLSKEY 78
           S     + QET+  +P   ++TWQS V+ES+LPV+VEFWASWCGPC+MI P+I  LSKEY
Sbjct: 54  SVVCAAQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEY 113

Query: 79  EGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTASMEKFL 114
           EGK   YK++TD N  IA+++                       VP++TL +S++K++
Sbjct: 114 EGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

[Close]

BLAST of Pay0008460 vs. ExPASy Swiss-Prot
Match: Q9XGS0 (Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.8e-20
Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 18  RSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDLSKE 77
           R   I+ EAQ+TA  +P   ++TW+S V+++  PV+V+FWA WCGPC+MI PI+++L+++
Sbjct: 58  RRGGIICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQ 117

Query: 78  YEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTASMEKFL 114
           Y GK KF+K++TD++ +   +Y                       VPK TL  S++KFL
Sbjct: 118 YTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSIDKFL 176

[Close]

BLAST of Pay0008460 vs. ExPASy Swiss-Prot
Match: Q9SEU8 (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-20
Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 22  IVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDLSKEYEGK 81
           +V EAQET   +    ++TW S V+++  PV+V+FWA WCGPC+MI P+++DL++ Y GK
Sbjct: 71  VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGK 130

Query: 82  FKFYKVDTDNNSSIASRY-----------------------VPKATLTASMEKFL 114
            KFYK++TD + +   +Y                       VPK TLT+S++KFL
Sbjct: 131 IKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Pay0008460 vs. ExPASy TrEMBL
Match: A0A1S3BSU5 (LOW QUALITY PROTEIN: thioredoxin M2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493333 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.7e-48
Identity = 103/122 (84.43%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MDCCISTILTSNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASW 60
           +DC I     SNARFPHRSATIV EAQETAAI+PAALEATWQSQVIESKLPV+VEFWASW
Sbjct: 16  LDCFI-----SNARFPHRSATIVCEAQETAAIVPAALEATWQSQVIESKLPVVVEFWASW 75

Query: 61  CGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRY---------VPKATLTASMEK 114
           CGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRY         VPKATLTASMEK
Sbjct: 76  CGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRYGIREAIIGAVPKATLTASMEK 132

[Close]

BLAST of Pay0008460 vs. ExPASy TrEMBL
Match: A0A0A0L5C6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.3e-40
Identity = 90/125 (72.00%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARFPHRSATIV EAQETAAI+PAA EATW+S V ESKLPV+VEFWA WCGPCRM+HPI
Sbjct: 52  SNARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPI 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 113
           IDDLSKEYEGKFKFYKVDTD N SIASRY                       VPK TLTA
Sbjct: 112 IDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTA 171

[Close]

BLAST of Pay0008460 vs. ExPASy TrEMBL
Match: A0A6J1J2W9 (uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.5e-36
Identity = 81/126 (64.29%), Postives = 92/126 (73.02%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARF  RS  IV EAQETAAI+PAA EATW S V++S+LPV+VEFWA WCGPCRMIHPI
Sbjct: 52  SNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPI 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 114
           +D+LSK+Y GKFKFYKVDTD+NS +ASRY                       VPKATLTA
Sbjct: 112 VDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTA 171

[Close]

BLAST of Pay0008460 vs. ExPASy TrEMBL
Match: A0A6J1EN29 (uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC111435994 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.5e-36
Identity = 81/126 (64.29%), Postives = 92/126 (73.02%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARF  RS  IV EAQETAAI+PAA EATW S V++S+LPV+VEFWA WCGPCRMIHPI
Sbjct: 52  SNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPI 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 114
           +D+LSK+Y GKFKFYKVDTD+NS +ASRY                       VPKATLTA
Sbjct: 112 VDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTA 171

[Close]

BLAST of Pay0008460 vs. ExPASy TrEMBL
Match: A0A6J1IKG3 (uncharacterized protein LOC111477886 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477886 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.9e-33
Identity = 74/126 (58.73%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARF HRS  +V + QET++I+P+A EATWQSQVIES++PV+VEFWA WCGPCRMIHP+
Sbjct: 52  SNARFTHRSDRVVCDGQETSSIVPSASEATWQSQVIESRVPVLVEFWAPWCGPCRMIHPV 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 114
           +D+LSKEY GKFKFYKV+TD  + IASRY                       V K TLT 
Sbjct: 112 VDELSKEYAGKFKFYKVNTDQEAEIASRYAIRSVPTVIIFKNGEKKEAIIGAVTKTTLTD 171

[Close]

BLAST of Pay0008460 vs. NCBI nr
Match: XP_008452261.2 (PREDICTED: LOW QUALITY PROTEIN: thioredoxin M2, chloroplastic [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 103/122 (84.43%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MDCCISTILTSNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASW 60
           +DC I     SNARFPHRSATIV EAQETAAI+PAALEATWQSQVIESKLPV+VEFWASW
Sbjct: 16  LDCFI-----SNARFPHRSATIVCEAQETAAIVPAALEATWQSQVIESKLPVVVEFWASW 75

Query: 61  CGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRY---------VPKATLTASMEK 114
           CGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRY         VPKATLTASMEK
Sbjct: 76  CGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRYGIREAIIGAVPKATLTASMEK 132

[Close]

BLAST of Pay0008460 vs. NCBI nr
Match: XP_038905006.1 (thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 9.6e-42
Identity = 93/126 (73.81%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARFPHRSATIV EAQETAAI+PAA EATW+S VIESKLPV+VEFWA WCGPCRMIHPI
Sbjct: 52  SNARFPHRSATIVCEAQETAAIVPAASEATWKSMVIESKLPVLVEFWAPWCGPCRMIHPI 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 114
           ID+LSKEY GKFKFYKVDTDNNSSIAS+Y                       VPKATLTA
Sbjct: 112 IDELSKEYTGKFKFYKVDTDNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTA 171

[Close]

BLAST of Pay0008460 vs. NCBI nr
Match: XP_004133707.1 (uncharacterized protein LOC101204508 [Cucumis sativus] >KGN56239.1 hypothetical protein Csa_010560 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 6.9e-40
Identity = 90/125 (72.00%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARFPHRSATIV EAQETAAI+PAA EATW+S V ESKLPV+VEFWA WCGPCRM+HPI
Sbjct: 52  SNARFPHRSATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPI 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 113
           IDDLSKEYEGKFKFYKVDTD N SIASRY                       VPK TLTA
Sbjct: 112 IDDLSKEYEGKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTA 171

[Close]

BLAST of Pay0008460 vs. NCBI nr
Match: XP_022984702.1 (uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharacterized protein LOC111810091 [Cucurbita pepo subsp. pepo] >KAG6577376.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.8 bits (403), Expect = 1.3e-35
Identity = 81/126 (64.29%), Postives = 92/126 (73.02%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARF  RS  IV EAQETAAI+PAA EATW S V++S+LPV+VEFWA WCGPCRMIHPI
Sbjct: 52  SNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPI 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 114
           +D+LSK+Y GKFKFYKVDTD+NS +ASRY                       VPKATLTA
Sbjct: 112 VDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTA 171

[Close]

BLAST of Pay0008460 vs. NCBI nr
Match: XP_022929416.1 (uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.8 bits (403), Expect = 1.3e-35
Identity = 81/126 (64.29%), Postives = 92/126 (73.02%), Query Frame = 0


Query: 11  SNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPI 70
           SNARF  RS  IV EAQETAAI+PAA EATW S V++S+LPV+VEFWA WCGPCRMIHPI
Sbjct: 52  SNARFAQRSGRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPI 111

Query: 71  IDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTA 114
           +D+LSK+Y GKFKFYKVDTD+NS +ASRY                       VPKATLTA
Sbjct: 112 VDELSKQYAGKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTA 171

[Close]

BLAST of Pay0008460 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 107.8 bits (268), Expect = 5.6e-24
Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 18  RSATIVYEAQETAAI---LPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDL 77
           R   I  EAQ+T A    +P   ++ WQ++V+ES +PV+VEFWA WCGPCRMIHPI+D L
Sbjct: 70  RGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQL 129

Query: 78  SKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATLTASMEK 114
           +K++ GKFKFYK++TD + + A+RY                       VP+ TL  ++E+
Sbjct: 130 AKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIER 189

[Close]

BLAST of Pay0008460 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.4e-21
Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 22  IVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDLSKEYEGK 81
           +V EAQET   +    ++TW S V+++  PV+V+FWA WCGPC+MI P+++DL++ Y GK
Sbjct: 71  VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGK 130

Query: 82  FKFYKVDTDNNSSIASRY-----------------------VPKATLTASMEKFL 114
            KFYK++TD + +   +Y                       VPK TLT+S++KFL
Sbjct: 131 IKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Pay0008460 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 97.1 bits (240), Expect = 9.9e-21
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 9   LTSNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRMIH 68
           L+ N+R       ++ EAQ+TA  +P   ++TW S V+++  PV V+FWA WCGPC+MI 
Sbjct: 52  LSKNSRVSRLRRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMID 111

Query: 69  PIIDDLSKEYEGKFKFYKVDTDNNSSIASRY-----------------------VPKATL 114
           PI+++L+++Y G+FKFYK++TD + +   +Y                       V K TL
Sbjct: 112 PIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTL 171

[Close]

BLAST of Pay0008460 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-15
Identity = 36/97 (37.11%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 7   TILTSNARFPHRSATIVYEAQETAAILPAALEATWQSQVIESKLPVIVEFWASWCGPCRM 66
           ++L+S+A     S   V +++  A +     + +W+  V++S+ PV+VEF+ SWCGPCRM
Sbjct: 47  SLLSSSASRLRLSPLCVRDSRAAAEV----TQRSWEDSVLKSETPVLVEFYTSWCGPCRM 106

Query: 67  IHPIIDDLSKEYEGKFKFYKVDTDNNSSIASRYVPKA 104
           +H IID+++ +Y GK   Y ++ DN+  +A  Y  KA
Sbjct: 107 VHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKA 139

[Close]

BLAST of Pay0008460 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 3.7e-15
Identity = 30/66 (45.45%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 38  EATWQSQVIESKLPVIVEFWASWCGPCRMIHPIIDDLSKEYEGKFKFYKVDTDNNSSIAS 97
           + +W+  V++S+ PV+VEF+ SWCGPCRM+H IID+++ +Y GK   Y ++ DN+  +A 
Sbjct: 73  QRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAE 132

Query: 98  RYVPKA 104
            Y  KA
Sbjct: 133 EYEIKA 138

The following BLAST results are available for this feature:

BLAST of Pay0008460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7X8R5	3.6e-23	44.09	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q9SEU6	7.9e-23	43.44	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
Q6H7E4	3.9e-22	43.22	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0...	[more]
Q9XGS0	2.8e-20	38.66	Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1	[more]
Q9SEU8	4.8e-20	40.00	Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2	[more]

BLAST of Pay0008460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSU5	5.7e-48	84.43	LOW QUALITY PROTEIN: thioredoxin M2, chloroplastic OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0L5C6	3.3e-40	72.00	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920...	[more]
A0A6J1J2W9	6.5e-36	64.29	uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904...	[more]
A0A6J1EN29	6.5e-36	64.29	uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A6J1IKG3	3.9e-33	58.73	uncharacterized protein LOC111477886 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Pay0008460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452261.2	1.2e-47	84.43	PREDICTED: LOW QUALITY PROTEIN: thioredoxin M2, chloroplastic [Cucumis melo]	[more]
XP_038905006.1	9.6e-42	73.81	thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benin...	[more]
XP_004133707.1	6.9e-40	72.00	uncharacterized protein LOC101204508 [Cucumis sativus] >KGN56239.1 hypothetical ...	[more]
XP_022984702.1	1.3e-35	64.29	uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharac...	[more]
XP_022929416.1	1.3e-35	64.29	uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredo...	[more]

BLAST of Pay0008460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15360.1	5.6e-24	43.44	thioredoxin M-type 4	[more]
AT4G03520.1	3.4e-21	40.00	Thioredoxin superfamily protein	[more]
AT1G03680.1	9.9e-21	36.72	thioredoxin M-type 1	[more]
AT2G15570.2	2.1e-15	37.11	Thioredoxin superfamily protein	[more]
AT2G15570.1	3.7e-15	45.45	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 36..107 e-value: 2.8E-22 score: 80.7
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 14..99
None	No IPR available	PANTHER	PTHR45663:SF24	THIOREDOXIN-1-LIKE	coord: 14..99
None	No IPR available	CDD	cd02947	TRX_family	coord: 39..99 e-value: 4.06517E-24 score: 86.0728
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 38..99 e-value: 9.0E-20 score: 70.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 26..113 score: 10.873674
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 53..71
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 38..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0008460.1	Pay0008460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor