Pay0008084 (gene) Melon (Payzawat) v1

Overview
NamePay0008084
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr12: 3664400 .. 3666346 (+)
RNA-Seq ExpressionPay0008084
SyntenyPay0008084
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTTCCCTACAGCCATGGCTACTCACAATCCCAGTACGTTTTTCCCCCCTTTTTTTTCTGTTCGTACATTTATTTTCTACTTAATCACCTTCAATCTACAAAACCCATGTTCCAGTAAGTTGACAACACTCAATGGGATTAAAAGTTTTTCCCCTTTTGAATTTAGTGCTCAAATTGCTATTTCACTTGCAATACTATTTTCAAAATGCCCTAAATCCCTCGTTTTCGATTTTCAGGATCAAGTTTGTGATATTTGAGGTGATATTGTGTATAAGGAAGTAGTTTTCACTTCCTCTGCATGCTAAATAGCCTGTGAGCACATCTATGCTTTACTTCTCTTTTCTTATCATTATAATTTCTTTCTTAGTTTTCTTCTCATTTTGGTCTGATCTTAATATCCTTGTTTCTTTAATGTACTTTTGTCGTTGTCTGTACCAGTTATTGTATAATGCATGTTCATAATGTTAAGAAAATCCCAGCAAGTTGGGTTTGTGAGTCATGTAAGTTCAATAGAAGAGATGTTAGTGAATCATGACACCCATTTTAGTCTTAAACACAAACTCTTCTGTTGTGAGACTTTAAATGTTGCTTCTCTTGTTGGACAACGGCTTCAATAAGCAACCATAGAATCTAAAGTCTTCTTCCATAACTTCAAATGTTGCTTATGTGATATTGAACTTCGAGAATTTTGTTAATTTTTGTTGATGCCGAAATTTTGGCAGGTGTGAATCTGCCTAATTTGGATCACCTCAACTAAGAATTGAGAGAAGAGAGTACTTTTACAACAATAATGATTCTACATGTTGATGTACTGCTTGCCACACACATTCTGCGTCAGCAAGGACTTGTGTTGGTATGGCAAGGATTGGAGTTGTGTGGTTTTCCTTTCTATGAACATGAGGTTGGGTTAGCGTATTTGAGTCGATCCTGGTTTCTTGTTGACCAAGCTTTGAGTCATTTGGGTTGGCTCTAGGTGTAATTGACCAAGCTTAGATTAGGCTACAAGCAACAAACATGGCCTTGTCTGCCAGGATCCAACTCATATGCTGTGCATTGGCATGCTTTGGGGTTTCGTCTTTGGAGATCCTTCTGAGTTTTTGTGTATTTCAGGTTTAGTTCTACTCATAATGGTGACTTCCACTCTTAAGTTGGGTTTGTGGTTTCGCCTTTGGTTCTCCCAAACTAAACATTCCAGGTTCAATCTGGGAGTATGATCCTCTGCTTGAAGTTGGGTCTATAATGGCATGAACGTGCTTGGTTTTTTACTTAGGCATCTTTTTCTGAGATCTTGAGAGAAACCTCAGATTTGGTATTTTCTCGGAATAATTGGCTTACCTCATTGAGCTTCATTCTGACATTTCAGCTCGTATCATCCACTTCAGTATCATGACCAGTGCTTAGTCTTTCTAAGTTTGCCTATTGGTTGTATTCTAACGACGGTTGAGGACACTTTTACTTGTATTCTCTTACCAACTCTCTTTGCTCGTTTGTTTCAGTTCCTCAAAGGATCAAATATTTCCCTTCTATAGCTTGACATTTGCAAGATCGGTAAGTAATCTGAGTAAAGATTTTCACTTTTGTCTTGCCTTAAAAGGTGAGTCTTGTTTCTTTGCGTTTTTCATCAATAATTCCACCTTTTGCTGAGGGGTTAATGTTGTTGAGCCCGACCGAGGCTGAAGTCAACATTTTTTGTTGTTTCTTTTTTGTTTTTGTGTGTTGTTTCTAACTCTTCTTATCTATTTCAGATATGGGTGGTCCTCGGCTCTCTTTGTATGAACGCCTAGCTCTAAAGAAGGCCCCTAGAAATGCCGTTGAGACATCCGAGGGACCATCGACAGTAAACGTCACTGACCTGACAGAGGACAAGAATCCTTTTTATTCAACCTTTGATTCCTCATCACAAGTCCCCTGCAAACTTTTATCAGTCCCATCAGCTACATAG

mRNA sequence

ATGGGTGTTCCCTACAGCCATGGCTACTCACAATCCCATTCCTCAAAGGATCAAATATTTCCCTTCTATAGCTTGACATTTGCAAGATCGGTAAGTAATCTGAGTAAAGATTTTCACTTTTGTCTTGCCTTAAAAGATATGGGTGGTCCTCGGCTCTCTTTGTATGAACGCCTAGCTCTAAAGAAGGCCCCTAGAAATGCCGTTGAGACATCCGAGGGACCATCGACAGTAAACGTCACTGACCTGACAGAGGACAAGAATCCTTTTTATTCAACCTTTGATTCCTCATCACAAGTCCCCTGCAAACTTTTATCAGTCCCATCAGCTACATAG

Coding sequence (CDS)

ATGGGTGTTCCCTACAGCCATGGCTACTCACAATCCCATTCCTCAAAGGATCAAATATTTCCCTTCTATAGCTTGACATTTGCAAGATCGGTAAGTAATCTGAGTAAAGATTTTCACTTTTGTCTTGCCTTAAAAGATATGGGTGGTCCTCGGCTCTCTTTGTATGAACGCCTAGCTCTAAAGAAGGCCCCTAGAAATGCCGTTGAGACATCCGAGGGACCATCGACAGTAAACGTCACTGACCTGACAGAGGACAAGAATCCTTTTTATTCAACCTTTGATTCCTCATCACAAGTCCCCTGCAAACTTTTATCAGTCCCATCAGCTACATAG

Protein sequence

MGVPYSHGYSQSHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETSEGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT
Homology
[Close]
BLAST of Pay0008084 vs. ExPASy TrEMBL
Match: A0A1S3C6E7 (uncharacterized protein LOC103497201 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497201 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MGVPYSHGYSQSHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLAL 60
           MGVPYSHGYSQSHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLAL
Sbjct: 1   MGVPYSHGYSQSHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLAL 60

Query: 61  KKAPRNAVETSEGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 111
           KKAPRNAVETSEGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT
Sbjct: 61  KKAPRNAVETSEGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 110

[Close]
BLAST of Pay0008084 vs. ExPASy TrEMBL
Match: A0A1S4E1J5 (uncharacterized protein LOC103497201 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497201 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.9e-46
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 12  SHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 71
           S SSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS
Sbjct: 4   SLSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 63

Query: 72  EGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 111
           EGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT
Sbjct: 64  EGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 102

[Close]
BLAST of Pay0008084 vs. ExPASy TrEMBL
Match: A0A5A7SRR9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00810 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 12  SHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 71
           S SSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS
Sbjct: 91  SSSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 150

Query: 72  EGPST 77
           EGPST
Sbjct: 151 EGPST 155

[Close]
BLAST of Pay0008084 vs. ExPASy TrEMBL
Match: A0A5D3BQJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00660 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 12  SHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 71
           S SSKDQIFPFYSLTFARSV              +MGGPRLSLYERLALKKAPRNAVETS
Sbjct: 91  SSSSKDQIFPFYSLTFARSV--------------NMGGPRLSLYERLALKKAPRNAVETS 141

Query: 72  EGPST 77
           EGPST
Sbjct: 151 EGPST 141

[Close]
BLAST of Pay0008084 vs. NCBI nr
Match: XP_008457535.1 (PREDICTED: uncharacterized protein LOC103497201 isoform X1 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 2.8e-54
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MGVPYSHGYSQSHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLAL 60
           MGVPYSHGYSQSHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLAL
Sbjct: 1   MGVPYSHGYSQSHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLAL 60

Query: 61  KKAPRNAVETSEGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 111
           KKAPRNAVETSEGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT
Sbjct: 61  KKAPRNAVETSEGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 110

[Close]
BLAST of Pay0008084 vs. NCBI nr
Match: XP_016902097.1 (PREDICTED: uncharacterized protein LOC103497201 isoform X2 [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 8.1e-46
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 12  SHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 71
           S SSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS
Sbjct: 4   SLSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 63

Query: 72  EGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 111
           EGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT
Sbjct: 64  EGPSTVNVTDLTEDKNPFYSTFDSSSQVPCKLLSVPSAT 102

[Close]
BLAST of Pay0008084 vs. NCBI nr
Match: KAA0033894.1 (uncharacterized protein E6C27_scaffold43059G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 3.2e-26
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0 

Query: 12  SHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 71
           S SSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS
Sbjct: 91  SSSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 150

Query: 72  EGPST 77
           EGPST
Sbjct: 151 EGPST 155

[Close]
BLAST of Pay0008084 vs. NCBI nr
Match: TYK01278.1 (uncharacterized protein E5676_scaffold49G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 3.7e-14
Identity = 49/65 (75.38%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 12  SHSSKDQIFPFYSLTFARSVSNLSKDFHFCLALKDMGGPRLSLYERLALKKAPRNAVETS 71
           S SSKDQIFPFYSLTFARSV              +MGGPRLSLYERLALKKAPRNAVETS
Sbjct: 91  SSSSKDQIFPFYSLTFARSV--------------NMGGPRLSLYERLALKKAPRNAVETS 141

Query: 72  EGPST 77
           EGPST
Sbjct: 151 EGPST 141

The following BLAST results are available for this feature:
BLAST of Pay0008084 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0008084 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C6E71.4e-54100.00uncharacterized protein LOC103497201 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4E1J53.9e-4698.99uncharacterized protein LOC103497201 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7SRR91.6e-2698.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQJ21.8e-1475.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Pay0008084 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008457535.12.8e-54100.00PREDICTED: uncharacterized protein LOC103497201 isoform X1 [Cucumis melo][more]
XP_016902097.18.1e-4698.99PREDICTED: uncharacterized protein LOC103497201 isoform X2 [Cucumis melo][more]
KAA0033894.13.2e-2698.46uncharacterized protein E6C27_scaffold43059G00810 [Cucumis melo var. makuwa][more]
TYK01278.13.7e-1475.38uncharacterized protein E5676_scaffold49G00660 [Cucumis melo var. makuwa][more]
BLAST of Pay0008084 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0008084.1Pay0008084.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane