Pay0008033 (gene) Melon (Payzawat) v1

Overview


Name	Pay0008033
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Integrase
Location	chr03: 9402794 .. 9403513 (-)
RNA-Seq Expression	Pay0008033
Synteny	Pay0008033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCCGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTCTTCGTTATATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGATGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGTATTCAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCATTATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTAGAATCAAATATCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACTCAAGATCAAGTGGCTGATATTTTTACAAAGGCGCTCAAGTTTGACTTATTTGTTAAATTCAGAGGAAAACTTGGAGTTGCTCAAGTTTAG

mRNA sequence

ATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCCGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTCTTCGTTATATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGATGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGTATTCAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCATTATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTAGAATCAAATATCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACTCAAGATCAAGTGGCTGATATTTTTACAAAGGCGCTCAAGTTTGACTTATTTGTTAAATTCAGAGGAAAACTTGGAGTTGCTCAAGTTTAG

Coding sequence (CDS)

ATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCCGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTCTTCGTTATATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGATGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAAAAGAATTGAAGTGTATTCAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCATTATCAAAGAATCCAGTTTTCCATGGAAGAAGCAAGCATATTAGAATCAAATATCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACTCAAGATCAAGTGGCTGATATTTTTACAAAGGCGCTCAAGTTTGACTTATTTGTTAAATTCAGAGGAAAACTTGGAGTTGCTCAAGTTTAG

Protein sequence

MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

Homology

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BLAST of Pay0008033 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-50
Identity = 104/223 (46.64%), Postives = 137/223 (61.43%), Query Frame = 0


Query: 17   DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIY 76
            DP+ YR +VGSL YL  TRPDI +AV+ LS+FM  P   H +A KR+LRY+ GT N GI+
Sbjct: 1241 DPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIF 1300

Query: 77   YKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYIS 136
             KK +   +  + D+DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S
Sbjct: 1301 LKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRS 1360

Query: 137  LAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRD 196
            +A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI I YHFIR+
Sbjct: 1361 VANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRN 1420

Query: 197  LVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
             V+ G + V +  T DQ+AD  TK L    F  F  K+GV +V
Sbjct: 1421 QVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTRV 1463

[Close]

BLAST of Pay0008033 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.4e-50
Identity = 102/223 (45.74%), Postives = 137/223 (61.43%), Query Frame = 0


Query: 17   DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIY 76
            DP+ YR +VGSL YL  TRPD+ +AV+ LS++M  P   HW A KRVLRY+ GT + GI+
Sbjct: 1224 DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIF 1283

Query: 77   YKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYIS 136
             KK +   +  + D+DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S
Sbjct: 1284 LKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRS 1343

Query: 137  LAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRD 196
            +A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI + YHFIR+
Sbjct: 1344 VANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1403

Query: 197  LVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
             V+ G + V +  T DQ+AD  TK L    F  F  K+GV +V
Sbjct: 1404 QVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKV 1446

[Close]

BLAST of Pay0008033 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-45
Identity = 97/210 (46.19%), Postives = 139/210 (66.19%), Query Frame = 0


Query: 21   YRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK 80
            Y S VGSLMY +  TRPDI  AV ++SRF+ NP + HWEA K +LRY+ GT    + +  
Sbjct: 1111 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1170

Query: 81   VSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA 140
             S+ ++ G+ D+D  G++D+ KS++GY+F+   G  SW SK Q  VALSTTEAEYI+   
Sbjct: 1171 -SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATE 1230

Query: 141  AGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVK 200
             G + +WL+  L+EL   QK E V++CD+ SAI LSKN ++H R+KHI ++YH+IR++V 
Sbjct: 1231 TGKEMIWLKRFLQELGLHQK-EYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVD 1290

Query: 201  DGEVIVKYCKTQDQVADIFTKAL---KFDL 227
            D  + V    T +  AD+ TK +   KF+L
Sbjct: 1291 DESLKVLKISTNENPADMLTKVVPRNKFEL 1318

[Close]

BLAST of Pay0008033 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-43
Identity = 95/221 (42.99%), Postives = 143/221 (64.71%), Query Frame = 0


Query: 22   RSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK- 81
            RSL+G LMY +  TRPD+  AV++LSR+ +      W+  KRVLRY+ GTI+  + +KK 
Sbjct: 1182 RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKN 1241

Query: 82   -VSESVMFGFCDSDWGGNVDDHKSTSGYVFSM-GSGVFSWTSKKQSVVALSTTEAEYISL 141
               E+ + G+ DSDW G+  D KST+GY+F M    +  W +K+Q+ VA S+TEAEY++L
Sbjct: 1242 LAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMAL 1301

Query: 142  AAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDL 201
              A  +ALWL+++L  +    +    ++ DN   I+++ NP  H R+KHI IKYHF R+ 
Sbjct: 1302 FEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQ 1361

Query: 202  VKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQ 239
            V++  + ++Y  T++Q+ADIFTK L    FV+ R KLG+ Q
Sbjct: 1362 VQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQ 1402

[Close]

BLAST of Pay0008033 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.9e-28
Identity = 60/128 (46.88%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 21  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK 80
           Y S VG++MYL   TRPD+  AV +LS+F ++P  +HW+A KRVLRY+  T  +G+ + +
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 81  VSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA 140
              + + G+ D+DW G+V+  +STSGY+F +  G  SW SKKQ  VALS+TE EY++L+ 
Sbjct: 66  AGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSE 125

Query: 141 AGCQALWL 148
           A  +A+WL
Sbjct: 126 ATQEAVWL 133

[Close]

BLAST of Pay0008033 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 1110 MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 1169

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 1170 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1229

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1230 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1289

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1290 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Pay0008033 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 1110 MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 1169

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 1170 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1229

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1230 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1289

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1290 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Pay0008033 vs. ExPASy TrEMBL
Match: A0A5D3D538 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
           MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 55  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 114

Query: 61  KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
           KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 115 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 174

Query: 121 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
           KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 175 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 234

Query: 181 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
           HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 235 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 293

[Close]

BLAST of Pay0008033 vs. ExPASy TrEMBL
Match: A0A5A7UDP7 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001450 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 1110 MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 1169

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 1170 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1229

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1230 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1289

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1290 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Pay0008033 vs. ExPASy TrEMBL
Match: A0A5A7TWN2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00690 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 895  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 954

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 955  KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1014

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1015 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1074

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1075 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1133

[Close]

BLAST of Pay0008033 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 5.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 1110 MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 1169

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 1170 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1229

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1230 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1289

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1290 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Pay0008033 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 5.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 1110 MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 1169

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 1170 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1229

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1230 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1289

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1290 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Pay0008033 vs. NCBI nr
Match: KAA0038926.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 5.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 1110 MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 1169

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 1170 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1229

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1230 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1289

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1290 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Pay0008033 vs. NCBI nr
Match: KAA0048003.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 5.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 895  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 954

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 955  KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1014

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1015 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1074

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1075 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1133

[Close]

BLAST of Pay0008033 vs. NCBI nr
Match: KAA0057291.1 (integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. makuwa] >KAA0062702.1 integrase [Cucumis melo var. makuwa] >TYJ98712.1 integrase [Cucumis melo var. makuwa] >TYK13441.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 5.9e-134
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1    MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
            MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG
Sbjct: 1110 MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 1169

Query: 61   KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK
Sbjct: 1170 KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 1229

Query: 121  KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
            KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF
Sbjct: 1230 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 1289

Query: 181  HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 240
            HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Sbjct: 1290 HGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV 1348

[Close]

BLAST of Pay0008033 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 151.8 bits (382), Expect = 7.2e-37
Identity = 79/196 (40.31%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 1   MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAG 60
           MD ++       G+ VD   YR L+G LMYL  TR DI FAV+ LS+F   P+ +H +A 
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

Query: 61  KRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSK 120
            ++L YI GT+  G++Y   +E  +  F D+ +    D  +ST+GY   +G+ + SW SK
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477

Query: 121 KQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVF 180
           KQ VV+ S+ EAEY +L+ A  + +WL    +EL+      T+LFCDN +AI ++ N VF
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVF 537

Query: 181 HGRSKHIRIKYHFIRD 197
           H R+KHI    H +R+
Sbjct: 538 HERTKHIESDCHSVRE 553

[Close]

BLAST of Pay0008033 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26
Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 17  DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIY 76
           DPS +RS+VG+L YLT TRPDI +AV+++ + M  P  + ++  KRVLRY+ GTI  G+Y
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 77  YKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYIS 136
             K S+  +  FCDSDW G     +ST+G+   +G  + SW++K+Q  V+ S+TE EY +
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 137 LAAAGCQALW 147
           LA    +  W
Sbjct: 216 LALTAAELTW 225

[Close]

BLAST of Pay0008033 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-12
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 29  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGF 88
           MYLT TRPD+ FAV+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  +  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 89  CDSDWGGNVDDHKSTSGY 107
            DSDW    D  +S +G+
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of Pay0008033 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.2e-50	46.64	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	9.4e-50	45.74	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	2.4e-45	46.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.3e-43	42.99	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	5.9e-28	46.88	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Pay0008033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV1	2.9e-134	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3E3T2	2.9e-134	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5D3D538	2.9e-134	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00090 PE=...	[more]
A0A5A7UDP7	2.9e-134	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001450 PE=...	[more]
A0A5A7TWN2	2.9e-134	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00690 PE=4...	[more]

BLAST of Pay0008033 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95504.1	5.9e-134	100.00	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	5.9e-134	100.00	integrase [Cucumis melo var. makuwa]	[more]
KAA0038926.1	5.9e-134	100.00	integrase [Cucumis melo var. makuwa]	[more]
KAA0048003.1	5.9e-134	100.00	integrase [Cucumis melo var. makuwa]	[more]
KAA0057291.1	5.9e-134	100.00	integrase [Cucumis melo var. makuwa] >KAA0060890.1 integrase [Cucumis melo var. ...	[more]

BLAST of Pay0008033 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.2e-37	40.31	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.6e-26	43.85	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	4.7e-12	39.74	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 96..238
None	No IPR available	PANTHER	PTHR11439:SF355	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 96..238
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 87..222 e-value: 2.28426E-84 score: 245.456
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 15..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0008033.1	Pay0008033.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding