Pay0007878 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007878
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transmembrane protein
Location	chr06: 5208472 .. 5209133 (-)
RNA-Seq Expression	Pay0007878
Synteny	Pay0007878

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATATCTTTGTTGTCAATTTCATGGTCTGAAGACGGAGAGATGAGCCAGAGATGGTACGCCCCAAGTTTCCGGTGGCCGGAATTCGGTTTGTGGCTGCGGTCGGCGTCGTTCAGTTGGCCGGATTTCAGTTTCTCGAACTTCAGCATCGAGTGGAACTCTCCGAACATCAGGTGGTTTAATTTTTCAATTCTCGATGATCTCTTATGGACCTTCATCGCTCTTCTCGAATCCCTAGTTCTTCTTACAATGTTGTGCTGTTTCTTCTTGTGCTGTGGATTCACGCTCTGATTTTCTCAATTACCGATTCAGTATGTTGTATATATATATAAATTTTCCTCTTCATCGATTTCAAAATCATCGCAATTAGTTACATATCCTCTGTAGTTTTACTGTTTTGCGTCAAGTATTTGATGGTTTCGTGCTTCATCTTCATCGATTTATGGCCGGAATCCCTAACTAGAATTAGAAGGATAATTGAATCTATGTGAACAGCTGTGAAAGATTATATATAGGAGAATTCTTCAGTGTTATTGTTGTGAATGATTTCGTTGTGTTCTTAATTCAATCAAAGATGTTTTTTCCCTTTTTGATTTGCTGTTCATCAAAGTGTTGTGCCCAAAGAATGTTAAGAGAATTTGCGAAGGAAATATATTGGAAA

mRNA sequence

GAAGATATCTTTGTTGTCAATTTCATGGTCTGAAGACGGAGAGATGAGCCAGAGATGGTACGCCCCAAGTTTCCGGTGGCCGGAATTCGGTTTGTGGCTGCGGTCGGCGTCGTTCAGTTGGCCGGATTTCAGTTTCTCGAACTTCAGCATCGAGTGGAACTCTCCGAACATCAGGTGGTTTAATTTTTCAATTCTCGATGATCTCTTATGGACCTTCATCGCTCTTCTCGAATCCCTAGTTCTTCTTACAATGTTGTGCTGTTTCTTCTTGTGCTGTGGATTCACGCTCTGATTTTCTCAATTACCGATTCAGTATGTTGTATATATATATAAATTTTCCTCTTCATCGATTTCAAAATCATCGCAATTAGTTACATATCCTCTGTAGTTTTACTGTTTTGCGTCAAGTATTTGATGGTTTCGTGCTTCATCTTCATCGATTTATGGCCGGAATCCCTAACTAGAATTAGAAGGATAATTGAATCTATGTGAACAGCTGTGAAAGATTATATATAGGAGAATTCTTCAGTGTTATTGTTGTGAATGATTTCGTTGTGTTCTTAATTCAATCAAAGATGTTTTTTCCCTTTTTGATTTGCTGTTCATCAAAGTGTTGTGCCCAAAGAATGTTAAGAGAATTTGCGAAGGAAATATATTGGAAA

Coding sequence (CDS)

ATGAGCCAGAGATGGTACGCCCCAAGTTTCCGGTGGCCGGAATTCGGTTTGTGGCTGCGGTCGGCGTCGTTCAGTTGGCCGGATTTCAGTTTCTCGAACTTCAGCATCGAGTGGAACTCTCCGAACATCAGGTGGTTTAATTTTTCAATTCTCGATGATCTCTTATGGACCTTCATCGCTCTTCTCGAATCCCTAGTTCTTCTTACAATGTTGTGCTGTTTCTTCTTGTGCTGTGGATTCACGCTCTGA

Protein sequence

MSQRWYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIALLESLVLLTMLCCFFLCCGFTL

Homology

[Close]

BLAST of Pay0007878 vs. ExPASy TrEMBL
Match: A0A2P5CV46 (Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_120890 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.4e-16
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 5  WYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIALLES 64
          WY  SFRWPEF L L S+ F WPDF  S  +  W+  + RWF+FS++DD+LWTF++++ES
Sbjct: 7  WYTSSFRWPEFDLSLPSSVFRWPDFDLSYLTTGWSLQSFRWFDFSLVDDVLWTFVSVVES 66

Query: 65 LVLLTMLCCFFLCCGFTL 83
          L LL+MLC FF+ CG TL
Sbjct: 67 LALLSMLCFFFVFCGCTL 84

[Close]

BLAST of Pay0007878 vs. ExPASy TrEMBL
Match: A0A2P5F5S8 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_110520 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15
Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 5  WYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIALLES 64
          WY  +FRWPEF   L S+ F WPDF  S  +  W+  + RWF+FSI+DD+LWTF++++ES
Sbjct: 7  WYTLAFRWPEFDFSLPSSVFRWPDFDLSYLTTGWSLQSFRWFDFSIVDDVLWTFVSVVES 66

Query: 65 LVLLTMLCCFFLCCGFTL 83
          L LL+MLC FF+ CG TL
Sbjct: 67 LALLSMLCFFFVFCGCTL 84

[Close]

BLAST of Pay0007878 vs. ExPASy TrEMBL
Match: A0A2C9UBR8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G002400 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.8e-15
Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 1  MSQRWYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIA 60
          M  RWYA + RWPEFG  L ++ F WP+F FS  +  W+  + RWF+FSI DD++WTF+ 
Sbjct: 1  MCTRWYATALRWPEFGFSLPTSIFRWPEFDFSYLTTGWSLQSFRWFDFSI-DDVVWTFVT 60

Query: 61 LLESLVLLTMLCCFFLCCGFTL 83
          +LES+ L+ MLC FF+ CG TL
Sbjct: 61 VLESVALVAMLCYFFVFCGCTL 81

[Close]

BLAST of Pay0007878 vs. ExPASy TrEMBL
Match: A0A6J1AZH6 (uncharacterized protein LOC110422276 OS=Herrania umbratica OX=108875 GN=LOC110422276 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-14
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 1   MSQRWYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIA 60
           M   WY+  FRWP+F   L ++ F WPDF+ S  +  W+  + RW++FSI+DD+LWTF+ 
Sbjct: 19  MCPMWYSSVFRWPDFEFSLPTSVFRWPDFNLSYLTSGWSLQSFRWWDFSIVDDVLWTFVT 78

Query: 61  LLESLVLLTMLCCFFLCCGFTL 83
           +LES  L+ MLC FFL CG TL
Sbjct: 79  VLESFALVAMLCFFFLFCGCTL 100

[Close]

BLAST of Pay0007878 vs. ExPASy TrEMBL
Match: W9SDS5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000043 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 4  RWYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIALLE 63
          RWY  +FRWPEF        F  P+  FS  +  W+S + RWF FSI+DD+LWT ++L+E
Sbjct: 5  RWYTSAFRWPEF-------DFRLPELDFSYLTSGWSSESFRWFGFSIVDDVLWTLVSLVE 64

Query: 64 SLVLLTMLCCFFLCCGFTL 83
          SL L  MLC FF+ CG TL
Sbjct: 65 SLALAAMLCFFFVFCGCTL 76

[Close]

BLAST of Pay0007878 vs. NCBI nr
Match: PON64912.1 (Transmembrane protein [Parasponia andersonii])

HSP 1 Score: 94.4 bits (233), Expect = 5.0e-16
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 5  WYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIALLES 64
          WY  SFRWPEF L L S+ F WPDF  S  +  W+  + RWF+FS++DD+LWTF++++ES
Sbjct: 7  WYTSSFRWPEFDLSLPSSVFRWPDFDLSYLTTGWSLQSFRWFDFSLVDDVLWTFVSVVES 66

Query: 65 LVLLTMLCCFFLCCGFTL 83
          L LL+MLC FF+ CG TL
Sbjct: 67 LALLSMLCFFFVFCGCTL 84

[Close]

BLAST of Pay0007878 vs. NCBI nr
Match: PON93146.1 (Transmembrane protein [Trema orientale])

HSP 1 Score: 91.7 bits (226), Expect = 3.3e-15
Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 5  WYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIALLES 64
          WY  +FRWPEF   L S+ F WPDF  S  +  W+  + RWF+FSI+DD+LWTF++++ES
Sbjct: 7  WYTLAFRWPEFDFSLPSSVFRWPDFDLSYLTTGWSLQSFRWFDFSIVDDVLWTFVSVVES 66

Query: 65 LVLLTMLCCFFLCCGFTL 83
          L LL+MLC FF+ CG TL
Sbjct: 67 LALLSMLCFFFVFCGCTL 84

[Close]

BLAST of Pay0007878 vs. NCBI nr
Match: OAY27631.1 (hypothetical protein MANES_15G002400v8 [Manihot esculenta])

HSP 1 Score: 89.4 bits (220), Expect = 1.6e-14
Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 1  MSQRWYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIA 60
          M  RWYA + RWPEFG  L ++ F WP+F FS  +  W+  + RWF+FSI DD++WTF+ 
Sbjct: 1  MCTRWYATALRWPEFGFSLPTSIFRWPEFDFSYLTTGWSLQSFRWFDFSI-DDVVWTFVT 60

Query: 61 LLESLVLLTMLCCFFLCCGFTL 83
          +LES+ L+ MLC FF+ CG TL
Sbjct: 61 VLESVALVAMLCYFFVFCGCTL 81

[Close]

BLAST of Pay0007878 vs. NCBI nr
Match: XP_021291799.1 (uncharacterized protein LOC110422276 [Herrania umbratica])

HSP 1 Score: 87.0 bits (214), Expect = 8.0e-14
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 1   MSQRWYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNSPNIRWFNFSILDDLLWTFIA 60
           M   WY+  FRWP+F   L ++ F WPDF+ S  +  W+  + RW++FSI+DD+LWTF+ 
Sbjct: 19  MCPMWYSSVFRWPDFEFSLPTSVFRWPDFNLSYLTSGWSLQSFRWWDFSIVDDVLWTFVT 78

Query: 61  LLESLVLLTMLCCFFLCCGFTL 83
           +LES  L+ MLC FFL CG TL
Sbjct: 79  VLESFALVAMLCFFFLFCGCTL 100

[Close]

BLAST of Pay0007878 vs. NCBI nr
Match: XP_015574700.1 (uncharacterized protein LOC107261256 [Ricinus communis])

HSP 1 Score: 85.9 bits (211), Expect = 1.8e-13
Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MSQRWYAPSFRWPEFGLWLRSASFSWPDFSFSNFSIEWNS-PNIRWFNFSILDDLLWTFI 60
          M  RWY+ +FRWP+FG  L ++ F WP+F FS  +  WNS  ++ WF+F ++DD++WTF+
Sbjct: 1  MCPRWYSSAFRWPDFGFSLPASIFRWPEFDFSYLTAGWNSLQSLNWFDF-LIDDVVWTFV 60

Query: 61 ALLESLVLLTMLCCFFLCCGFTL 83
           +LES+ ++ MLC FFL CG TL
Sbjct: 61 TVLESVAVVAMLCYFFLFCGCTL 82

[Close]

BLAST of Pay0007878 vs. TAIR 10
Match: AT5G49525.1 (unknown protein; Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-07
Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 21 SASFSWPDFSFSNFSIEWNSPNIRWF-NFSILDDLLWTFIALLESLVLLTMLCCFFLCCG 80
          S +F WP+ + S+ S  WN   +    + SI+DDLLW+F++++ESL +   +CCFFL CG
Sbjct: 18 SWAFRWPEVNLSSLSSGWNMRLLSLSGDLSIVDDLLWSFVSIIESLAITATVCCFFLFCG 77

Query: 81 FTL 83
           TL
Sbjct: 78 CTL 80

The following BLAST results are available for this feature:

BLAST of Pay0007878 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0007878 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5CV46	2.4e-16	56.41	Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_120890 PE=4...	[more]
A0A2P5F5S8	1.6e-15	55.13	Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_110520 PE=4 SV=1	[more]
A0A2C9UBR8	7.8e-15	52.44	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G002400 PE=4 SV=...	[more]
A0A6J1AZH6	3.9e-14	50.00	uncharacterized protein LOC110422276 OS=Herrania umbratica OX=108875 GN=LOC11042...	[more]
W9SDS5	1.4e-11	50.63	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000043 PE=4 SV=1	[more]

BLAST of Pay0007878 vs. NCBI nr


Match Name	E-value	Identity	Description
PON64912.1	5.0e-16	56.41	Transmembrane protein [Parasponia andersonii]	[more]
PON93146.1	3.3e-15	55.13	Transmembrane protein [Trema orientale]	[more]
OAY27631.1	1.6e-14	52.44	hypothetical protein MANES_15G002400v8 [Manihot esculenta]	[more]
XP_021291799.1	8.0e-14	50.00	uncharacterized protein LOC110422276 [Herrania umbratica]	[more]
XP_015574700.1	1.8e-13	49.40	uncharacterized protein LOC107261256 [Ricinus communis]	[more]

BLAST of Pay0007878 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49525.1	1.6e-07	44.44	unknown protein; Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33726:SF17	SUBFAMILY NOT NAMED	coord: 1..82
None	No IPR available	PANTHER	PTHR33726	TRANSMEMBRANE PROTEIN	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007878.1	Pay0007878.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane