Pay0007848 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007848
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr12: 21603466 .. 21604300 (+)
RNA-Seq Expression	Pay0007848
Synteny	Pay0007848

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGCACCCACTAATTCTCTTCAACCTTACACTTACTCTCTATATTCTTACATTCAAATTTCTTCTTCCTTTTCATGATTATATCAATGGACGAAGAAGTGGGATCTAAGAAAAGCAAGACCCAGGGGAATAGTAGTAATAATAACGCTACGAGATGGACGATTTTCAAGCGATCGTTGAGGAAAGAATCGAGAAAAATGAAGCTATTGGGGTCCGGATTCAAGTGGAAAAGACTGACCAATTTTCAGATTTCTTTTTTGGATAATTTTCTTTTCAAGATTGTTTCTATGTTGGAGGGCGTTGTTCTTGGTACTACACTCTGTTTCTTCTTCCTCTGTTTTGGTTGTCACTTTTGAATTTCGATTCCACTGTTTCTTTCTTTCTTTCTTCCTTTTTCTTTTATTGTTCTATGAACTGTAAGAATTTGGGTTTCGATTGTGATTTTCTTGTTTGGGAATAGCTTGGTGTTATTTAGAAGTTTAAATCTCTGGACGAATGAGCTTGATACGATTTTTGCCTCGTTTTAATGAAGAAGAGGAAAAAAAAAAAGTAGCCGGAAAATCCCGCGATCAATTGGGTTTTCCAGTGAGCGGGTGTTCTTGGCAGATGATGAAAGGATGTTGAGGTATGATCTGGGTAGGGAGAAAAATGGTGTGATTCCAAAAGTTGAAACCGATGTATTTGGTAATTTATGGCAATTGGGGAGGTTGGAATCCGATTCGGTTTCTTTAATTATGTTTTCCAATTTTATAATTAGTTAGACCAATTAAATTAATTTTGAAAATTAATGCATTCCTTTTCTGCTTGTAAACTTACTTTGGCAACATAAATCCAT

mRNA sequence

ACTGCACCCACTAATTCTCTTCAACCTTACACTTACTCTCTATATTCTTACATTCAAATTTCTTCTTCCTTTTCATGATTATATCAATGGACGAAGAAGTGGGATCTAAGAAAAGCAAGACCCAGGGGAATAGTAGTAATAATAACGCTACGAGATGGACGATTTTCAAGCGATCGTTGAGGAAAGAATCGAGAAAAATGAAGCTATTGGGGTCCGGATTCAAGTGGAAAAGACTGACCAATTTTCAGATTTCTTTTTTGGATAATTTTCTTTTCAAGATTGTTTCTATGTTGGAGGGCGTTGTTCTTGGTACTACACTCTGTTTCTTCTTCCTCTGTTTTGGTTGTCACTTTTGAATTTCGATTCCACTGTTTCTTTCTTTCTTTCTTCCTTTTTCTTTTATTGTTCTATGAACTGTAAGAATTTGGGTTTCGATTGTGATTTTCTTGTTTGGGAATAGCTTGGTGTTATTTAGAAGTTTAAATCTCTGGACGAATGAGCTTGATACGATTTTTGCCTCGTTTTAATGAAGAAGAGGAAAAAAAAAAAGTAGCCGGAAAATCCCGCGATCAATTGGGTTTTCCAGTGAGCGGGTGTTCTTGGCAGATGATGAAAGGATGTTGAGGTATGATCTGGGTAGGGAGAAAAATGGTGTGATTCCAAAAGTTGAAACCGATGTATTTGGTAATTTATGGCAATTGGGGAGGTTGGAATCCGATTCGGTTTCTTTAATTATGTTTTCCAATTTTATAATTAGTTAGACCAATTAAATTAATTTTGAAAATTAATGCATTCCTTTTCTGCTTGTAAACTTACTTTGGCAACATAAATCCAT

Coding sequence (CDS)

ATGATTATATCAATGGACGAAGAAGTGGGATCTAAGAAAAGCAAGACCCAGGGGAATAGTAGTAATAATAACGCTACGAGATGGACGATTTTCAAGCGATCGTTGAGGAAAGAATCGAGAAAAATGAAGCTATTGGGGTCCGGATTCAAGTGGAAAAGACTGACCAATTTTCAGATTTCTTTTTTGGATAATTTTCTTTTCAAGATTGTTTCTATGTTGGAGGGCGTTGTTCTTGGTACTACACTCTGTTTCTTCTTCCTCTGTTTTGGTTGTCACTTTTGA

Protein sequence

MIISMDEEVGSKKSKTQGNSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVSMLEGVVLGTTLCFFFLCFGCHF

Homology

[Close]

BLAST of Pay0007848 vs. ExPASy TrEMBL
Match: A0A6J1B6L1 (uncharacterized protein LOC110424571 OS=Herrania umbratica OX=108875 GN=LOC110424571 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 27 RWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVSMLEGVVLGTTLCFFF 86
          RW +FKR ++KES + K LGS FKWKRL N Q+SF+D+ LF+I S+LE + L  TLCFF+
Sbjct: 6  RWVLFKRLIKKESWRWKFLGSAFKWKRL-NIQLSFVDDVLFRIASVLEAIFLVATLCFFY 65

Query: 87 LCFGCHF 94
          LC GCHF
Sbjct: 66 LCCGCHF 71

[Close]

BLAST of Pay0007848 vs. ExPASy TrEMBL
Match: A0A061GEB5 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029517 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 12  KKSKTQGNSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVS 71
           +K+K +         RW +FKR ++KES + K LGS FKWKRL N Q+SF+D+ LF+I S
Sbjct: 109 RKNKKKKKEVMGGTKRWVLFKRLIKKESWRWKFLGSAFKWKRL-NIQLSFVDDVLFRIAS 168

Query: 72  MLEGVVLGTTLCFFFLCFGCHF 94
           +LE + L  TLCFF+LC GCHF
Sbjct: 169 VLEAIFLVATLCFFYLCCGCHF 189

[Close]

BLAST of Pay0007848 vs. ExPASy TrEMBL
Match: A0A1R3FVP9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.3e-13
Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = 0


Query: 19 NSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVSMLEGVVL 78
          +SS++++ RW +FKR L KES + K LGS FKWKRL N Q+SF D+ LF+I S+LE + L
Sbjct: 5  SSSSSSSKRWVLFKR-LIKESWRWKFLGSAFKWKRL-NIQLSFFDDVLFRIASVLEAIYL 64

Query: 79 GTTLCFFFLCFGCHF 94
            TLCFF+LC GCHF
Sbjct: 65 VATLCFFYLCCGCHF 77

[Close]

BLAST of Pay0007848 vs. ExPASy TrEMBL
Match: A0A1R3I7M5 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_24713 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 18 GNSSNNNATRWTI-FKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVSMLEGV 77
          G +S+++   W +  KR ++KES + K+LGSGFKWKRL N Q+SF+D+ LF+I S+LE +
Sbjct: 2  GGTSSSSWKGWVVLLKRLIKKESWRWKILGSGFKWKRL-NIQLSFIDDVLFRIASVLEAI 61

Query: 78 VLGTTLCFFFLCFGCHF 94
           L  TLCFF+LC GCHF
Sbjct: 62 YLVATLCFFYLCCGCHF 77

[Close]

BLAST of Pay0007848 vs. ExPASy TrEMBL
Match: A0A5D2NM64 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G045600v1 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-12
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 27 RWTIFKRSLRKESRKMKLLGSGFKWKRLTN--FQISFLDNFLFKIVSMLEGVVLGTTLCF 86
          RW +FKR ++KE  + K LGS FKWK++ +   Q+SF+D+ LFKI S+LE + L +TLCF
Sbjct: 8  RWMLFKRLMKKELWRWKFLGSAFKWKKIPSLTIQLSFIDDVLFKIASVLEAIFLVSTLCF 67

Query: 87 FFLCFGCHF 94
          F+LC GCHF
Sbjct: 68 FYLCCGCHF 76

[Close]

BLAST of Pay0007848 vs. NCBI nr
Match: KAG6583910.1 (hypothetical protein SDJN03_19842, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.1 bits (344), Expect = 7.7e-29
Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 3   ISMDEEVGSKKSKTQGNSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFL 62
           ISMDEEVG+K+SK  G+S    AT W IFKRSLR+ES KMKLLGS FKWKRLTN QISF+
Sbjct: 34  ISMDEEVGAKRSKGHGSS----ATMWAIFKRSLRRESSKMKLLGSAFKWKRLTNLQISFM 93

Query: 63  DNFLFKIVSMLEGVVLGTTLCFFFLCFGCHF 94
           DN LFKIVSMLEGVVL  TLCFFFLCFGCHF
Sbjct: 94  DNLLFKIVSMLEGVVLVATLCFFFLCFGCHF 120

[Close]

BLAST of Pay0007848 vs. NCBI nr
Match: KAG7019527.1 (hypothetical protein SDJN02_18488, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.0 bits (271), Expect = 2.2e-20
Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 3   ISMDEEVGSKKSKTQGNSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFL 62
           ISMDEEVG+K+SK  G+S    AT W IFKRSLR+ESRKMKLLGS FKWKRLTN QISF+
Sbjct: 45  ISMDEEVGAKRSKGHGSS----ATMWAIFKRSLRRESRKMKLLGSAFKWKRLTNLQISFM 104

Query: 63  DNFLFKIVSMLEGVVLGTTLCFFFLCF 90
           DN LFKIVSMLEGVVL        LC+
Sbjct: 105 DNLLFKIVSMLEGVVLMNEHFELHLCW 127

[Close]

BLAST of Pay0007848 vs. NCBI nr
Match: KAG7012520.1 (hypothetical protein SDJN02_25272, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.8 bits (268), Expect = 5.0e-20
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 5  MDEEVGSKKSKTQGNSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDN 64
          MDE+VG+K SK+ G    N ATRW IFKRSLR+ESRKMKLLGS FKWKRLTN QISF+DN
Sbjct: 1  MDEKVGAKNSKSHG----NQATRWAIFKRSLRRESRKMKLLGSAFKWKRLTNLQISFMDN 60

Query: 65 FLFKIVSMLEGVVLGTTLCFFF 87
           LFK VS+LEGVVL  T  F F
Sbjct: 61 ILFKFVSVLEGVVLENTRRFGF 78

[Close]

BLAST of Pay0007848 vs. NCBI nr
Match: EOY27743.1 (Uncharacterized protein TCM_029517 [Theobroma cacao])

HSP 1 Score: 85.5 bits (210), Expect = 2.6e-13
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 12  KKSKTQGNSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVS 71
           +K+K +         RW +FKR ++KES + K LGS FKWKRL N Q+SF+D+ LF+I S
Sbjct: 109 RKNKKKKKEVMGGTKRWVLFKRLIKKESWRWKFLGSAFKWKRL-NIQLSFVDDVLFRIAS 168

Query: 72  MLEGVVLGTTLCFFFLCFGCHF 94
           +LE + L  TLCFF+LC GCHF
Sbjct: 169 VLEAIFLVATLCFFYLCCGCHF 189

[Close]

BLAST of Pay0007848 vs. NCBI nr
Match: XP_017978435.1 (PREDICTED: uncharacterized protein LOC18596529 [Theobroma cacao])

HSP 1 Score: 85.5 bits (210), Expect = 2.6e-13
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 27 RWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVSMLEGVVLGTTLCFFF 86
          RW +FKR ++KES + K LGS FKWKRL N Q+SF+D+ LF+I S+LE + L  TLCFF+
Sbjct: 6  RWVLFKRLIKKESWRWKFLGSAFKWKRL-NIQLSFVDDVLFRIASVLEAIFLVATLCFFY 65

Query: 87 LCFGCHF 94
          LC GCHF
Sbjct: 66 LCCGCHF 71

[Close]

BLAST of Pay0007848 vs. TAIR 10
Match: AT5G46295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 29 TIFKRSLRKESRKMKLLGSGFKWKRLTNFQISFLDNFLFKIVSMLEGVVLGTTLCFFFLC 88
          +I+K +  +   K   LG G KWKRL N +++FL+   ++I+S++E +VL + L FFFLC
Sbjct: 8  SIWKTTKERTRLKFLGLGGGLKWKRL-NLKMTFLETLRYRIMSIIEAMVLVSKLAFFFLC 67

Query: 89 FGCHF 94
           GC F
Sbjct: 68 CGCKF 71

[Close]

BLAST of Pay0007848 vs. TAIR 10
Match: AT1G06475.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 27/82 (32.93%), Postives = 41/82 (50.00%), Query Frame = 0


Query: 12 KKSKTQGNSSNNNATRWTIFKRSLRKESRKMKLLGSGFKWKRLTNFQIS-FLDNFLFKIV 71
          KK K Q       A     ++R     S       S  KWKR+    ++  +D  ++K++
Sbjct: 11 KKKKLQQEEEQVTAKETQTWQRLRNLFSTSSSSSSSSAKWKRVEIIMLTEIVDGVVYKVM 70

Query: 72 SMLEGVVLGTTLCFFFLCFGCH 93
           ++E  VL +TLCFF+LC GCH
Sbjct: 71 YVVEAFVLVSTLCFFYLCCGCH 92

The following BLAST results are available for this feature:

BLAST of Pay0007848 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0007848 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1B6L1	1.3e-13	61.19	uncharacterized protein LOC110424571 OS=Herrania umbratica OX=108875 GN=LOC11042...	[more]
A0A061GEB5	1.3e-13	52.44	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029517 PE=4 SV=1	[more]
A0A1R3FVP9	6.3e-13	58.67	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1	[more]
A0A1R3I7M5	1.4e-12	54.55	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_24713 PE=4 SV=1	[more]
A0A5D2NM64	4.1e-12	55.07	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G045600v1 P...	[more]

BLAST of Pay0007848 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583910.1	7.7e-29	79.12	hypothetical protein SDJN03_19842, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019527.1	2.2e-20	71.26	hypothetical protein SDJN02_18488, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7012520.1	5.0e-20	71.95	hypothetical protein SDJN02_25272, partial [Cucurbita argyrosperma subsp. argyro...	[more]
EOY27743.1	2.6e-13	52.44	Uncharacterized protein TCM_029517 [Theobroma cacao]	[more]
XP_017978435.1	2.6e-13	61.19	PREDICTED: uncharacterized protein LOC18596529 [Theobroma cacao]	[more]

BLAST of Pay0007848 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46295.1	2.3e-07	43.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G06475.1	1.8e-04	32.93	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR33726:SF3	TRANSMEMBRANE PROTEIN	coord: 25..93
None	No IPR available	PANTHER	PTHR33726	TRANSMEMBRANE PROTEIN	coord: 25..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007848.1	Pay0007848.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane