Pay0007589 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007589
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	mediator of RNA polymerase II transcription subunit 1 isoform X1
Location	chr09: 11809237 .. 11814970 (+)
RNA-Seq Expression	Pay0007589
Synteny	Pay0007589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATTGTAGAGACGTTTGTTTTGTTTTTCGGAGTATCAAAGAGAGAAACCAAAGTCTAAATTTATTTACTTATTTATTTATTTTTCACAATCGCCGTCTCTCCCTTCCAAGACTCTTCTTCTCTATACGCTCCTTCGCTCGCTCTCTCGCTCGCTTCATCTTCTCTCTATCTCTCTATTTCTCTATTTCTCTATTTTTCTCTCTCTCCGCCGTTCCGTTTCTCTCTGCCGTTCTCCCTTCTCTCTGCCACCGCACGGCAGCTGAAACTCATCCAACCCAACAAACAGACAAAAACCCTATTCTCTGTTCCGAACAACCCAAGCCTCATTTTCTCCCATTCACAATCCCTTTCCCTCTCTCTCTCCGCCGCCGCTTTCGTTCTCCACACTCTCAAACTCTCTCTTTACCTATCTATTTTGTTGTCCCCCTCTTAAGCTCGCATTTCTTTTTGTTTTGGGGACATACAGCAACCACTGGGAGGCAGTTATTGAAAGCAGTTACGCCTTCTGGGGTTTCTCTCAATCAGTCTTCCGGGTAGGGTTAGTTCTTCGTCTTCATCGGATATCTCACAGGTTTTATTATCTATCTCTTCTGTATTTCTCTTGCGGGTTTGGACCTCTACGGAAGTTTTTTTTTCTTTTAACGGAGGGTGCATAATTTGGTTTAGGGTTTCTGATAATTTTGTTTTTTTGGGCACATTCAATCGGACTTGGGATTCTGGTTATTCCAATTTCTTATTTAGCTAGGGTTTCTTTTTGTTCTCTGATCGAACTGTTTTGACGGGGATAATCTTCTGTTCTGGAATTGCTTCACCACCTCTTTATTCTTGAGGTATACCTTCTTTATCTTTCTGCATCTCAACCGATTCCCTCAAAGATGAGGGTTTTCCAAGCGTATTTTGCTGGCCGAATCTACAGTTAATCGAACACGGAGGCAGGAAGACGAGAGTGAGACCTTTCCTTTTAAGTTTTAACATTCTTTTTAATTGAACACCTTCATTTTCTCCCTGATATTTCCTCTGTTTTTCATCCTCTGGTATTTCACTCCCGTATGAGAAATAGGGTATATTGATTTTGCGCATAAGATAAGATAAATCCCCTTCATAATGCGTTCCAGCTTGTAGCCAAATTGGTAGCTACTTGCTTGAATACCAGTTGTTGTGAAGTAGGATAGTTGTAGAAGATAGACTTCTTTAGTGGCATTCAGGACATAAATTTGAGAACCATCCCCTGCGTTCTTCTACCGTGTGCGAGTTTGCAATTCTGAAGCAATTCACTGCACACCTGTCTTTTCTGGTGGAACCCTGGATATGCCATAAAGTTGATGATACATATGGTCTGTTGCCGTGACTTGCATAGTCAGGGATGGTCGTTAAAGTTCACCCAGCTTAAAATAGTGGTTAGGCATTTGAAATAATAAAGTACGGGCTAGAGTTTTATAAATTCCTCTGCACAAGGAGTACAGTTTTTGGAAATTTGAGGTGGTAAAGAAGGCAAGACGTGCTCTTTTCTTCTGATATTTTGATCATGTTCAGTATTCCTTATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCACTTTCCGTCGTCTTCTTCCCACTCAGGTAGTGCTTTCATTCTTCTTTTCTTTTTCTTTTTTATTGTTCCTTGCTTCTAATAAAAGATGCGCTCTCTTACTGCTGACTTGCCTCTATTTTGATATTGTGAGCGTTGTTAATGTGTATACTATGTTGTGTAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATCGGTTGAACTTTGGAGATAATTGGGACCGTGATGCTCATGATCCTCTAGGAAAGATTCTTTCCAACAGAATTGATAAAGATGCTTTGCGAAGGTCTCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCACAGAAGGGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACTAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTTCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCCCAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACGTCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTTAATATGGCTGAAGCTTTGGTGCAGTCTCCATCTCGAACTCGTACTGCTCCCCAGGTATCTGAGGTACCATACCAACCTTCTTGTGCTGTATATTATGTTCTCCTTTTGATCTAACAGTCTCATCTTTTATCCCCTCTTTGGTAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTAGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTAATTGGAGCCAATGCAATTGTTGAATCTTTGTTGTTAGATCTTTTCCTACCTACTTATATTTTAATTATTTGGTGTTTGTTGATTAAAAAAATGTGAAGGATCGTACATAAAATATATAAGAAAACTTAGAACAATCTGCACGGTACCTAAACAACTTGTGCCAATCTTCGATTTCAGCTGGGACTAATACTCTCTTCAAAGCTACTTTTGTGTTTTAGTATTAGGGCAGATAAGATGTATCATGTATATATAACAAAAGTTATTTCTGGGCAAATTATAGTGAAAACTATGCGACAAAGTTGCTATATGTTTTGACATTTTTTCTGCACCTGCTGTTGGTGGCTGGTGACTGGTGTTATAAATTTTTGGATTTAGCTTGTTAAATAAACTCTGGCTTCTTCATTTTACGAAATGTAAATTCTTTTGTGGTAGTTTGTTATTCAGCTTCAACTTACTCTCATTGACTAAAGAACAGTGTGTGTTAGATTGCAGAAGTCAAAACATTTGTTAAAAATTTCGAAGCCATTTGCATTGTGCTAGATAACTAGACTACTTTCCCCCCAAATTTGATGAGAAACTCAATTTGAGAACGTTTGGGAGAACAAAGACAAGTGTTTTCTTTCCTGGCTCCTTTTGGAAATTTGTAAGAACTAGATGATAGGAAGGAGATAACCAGATTTGATTTGGGATGCATTCCATAGTATGCCTATTTGTGCTTTGCTACTTTTAACACATTCCATAGTATGCATATTTCTCTCAAGGATGGAAAAGGCCAATGTTAGATTAAATATGCTTTAAAGGAGGTGTAAAGTTGATTTAAGATTGTTGTGCTGTAGTCAATATGTCACTGATGGCTGGTTTTCTTTGTTTGTTAACGTGTTATATTTGGCAGGCAAGTTTTCTATTAACTGAATGTCAATCCCTATTCAGTATTAATAGTTGTAACTTGACTGATTGGTTCTCTTGTAAAGGTTCATTGTCTTCTGTTTTGTCTTTTGAAGCTGATGTAAATTATTGTTAAGTTTCAGTATAGTGATTTAGTAGACTTGCTTTGCGGTATAGTTCTTAAAATAGTCTTGGAACAAAAAAAGTCTTATACTATTTTGTTGTGTTTTATTTTGATGATTTCAAAACTAATTTATACATATCTGAGTCTTCTAAAATTTTAAATAGATTTGAATATGTTATTCTTATATTTACATTCTGAAGAAATAAAGAAGTTAAAAAGCAGACCATATCTTTGCTGATAATCTTTAGTAGACTTGGTTGTGAAGACAATTTTGACATAATGCATCCAAGTTCGCCTTTTCAATATGAAATGGTAAATTTCTACAACAGCGTATTGATTTTAACCTCCATCTCAGCACTAAACATATCTAGGAATACTTATTTCTCATTATTATATCTATCTGCAAATCTTCTGTTTCCTCCCTTTAGATAATCGTTACTGTTTTTTGTTTGACAGGTGCTTAGTTCTTCGGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCATCGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCACGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGTATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTGTGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACTGGAACAACATTGGAAAAAAGACCGTCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCCTCAATCGGCCAATCTAATGAACTAACAAGCGAAGAAATGGGCATTCCCGCAAGTCCTCGTGTTATTGAAAATGGTGCCGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAATATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGGTAAATTTATAAAATTTCTATTGCTCTTGCCTTGGGTTTTCAAAGTGTACTGTTCTTTTTTCTCTGTTAGCTGATGAAATTATAAATTTAATTATTAATTTTGCAGTACATGAACTTGAAGCCATCTCTAAAAATTGGTCGATGCATTCAGCCAAAGATATTTGTTCCATCTGAATCTCGCGAGGACAGCAAGGATGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGAATTACATTTTTCTTTTTCACCCATGAGAAGTTCTAGTTCACATTTTTTAATGGCAGTGGGGTTAGTTCTTTTTTCTTTTTTTCCCCCTTTTTAAATTTTTTCCCCTTCTTTTTTGTTTTTGATGGTTTAAAAGAAATGCTGATGAGAGTTGGTTGGGTTGGAAGAAGAGAGGTGGATGTTAATTGAACACTGAACAGTGCAAATAGTGAAATAAGTTACAGTTGCCCAAATCATCCTTGCTGCCTACCTTTACAGCAGAGGAGTTTTTCCGGTTTTTGAAAAAGGGCAGTTGCTGAGGTTTGGCAGGCCTTAAAGATGTGTATGCAAATTTGCATCTTTTGGTTTATTTTTGCATTTCTTTCTTTCTTTCTTTCTTTTTTTAATTCTGGAAGTTACTAGGAAAAAAAAGTTACTCCTTTCAAGGAAATTGGGAAGTTGTGGAAAATTGAAAAAGGTTTCTAACTTCATTCGGCGTATATTGACTTATTGTTTGAAACGTTACCTTTTTAGAGTTGGGGTAGTGTTAGACTTGTTTTGACATTGAATTGCAC

mRNA sequence

TCAATTGTAGAGACGTTTGTTTTGTTTTTCGGAGTATCAAAGAGAGAAACCAAAGTCTAAATTTATTTACTTATTTATTTATTTTTCACAATCGCCGTCTCTCCCTTCCAAGACTCTTCTTCTCTATACGCTCCTTCGCTCGCTCTCTCGCTCGCTTCATCTTCTCTCTATCTCTCTATTTCTCTATTTCTCTATTTTTCTCTCTCTCCGCCGTTCCGTTTCTCTCTGCCGTTCTCCCTTCTCTCTGCCACCGCACGGCAGCTGAAACTCATCCAACCCAACAAACAGACAAAAACCCTATTCTCTGTTCCGAACAACCCAAGCCTCATTTTCTCCCATTCACAATCCCTTTCCCTCTCTCTCTCCGCCGCCGCTTTCGTTCTCCACACTCTCAAACTCTCTCTTTACCTATCTATTTTGTTGTCCCCCTCTTAAGCTCGCATTTCTTTTTGTTTTGGGGACATACAGCAACCACTGGGAGGCAGTTATTGAAAGCAGTTACGCCTTCTGGGGTTTCTCTCAATCAGTCTTCCGGGTAGGGTTAGTTCTTCGTCTTCATCGGATATCTCACAGGTTTTATTATCTATCTCTTCTGTATTTCTCTTGCGGGTTTGGACCTCTACGGAAGTTTTTTTTTCTTTTAACGGAGGGTGCATAATTTGGTTTAGGGTTTCTGATAATTTTGTTTTTTTGGGCACATTCAATCGGACTTGGGATTCTGGTTATTCCAATTTCTTATTTAGCTAGGGTTTCTTTTTGTTCTCTGATCGAACTGTTTTGACGGGGATAATCTTCTGTTCTGGAATTGCTTCACCACCTCTTTATTCTTGAGGTATACCTTCTTTATCTTTCTGCATCTCAACCGATTCCCTCAAAGATGAGGGTTTTCCAAGCGTATTTTGCTGGCCGAATCTACAGTTAATCGAACACGGAGGCAGGAAGACGAGAGTGAGACCTTTCCTTTTAAGTTTTAACATTCTTTTTAATTGAACACCTTCATTTTCTCCCTGATATTTCCTCTGTTTTTCATCCTCTGGTATTTCACTCCCGTATGAGAAATAGGGTATATTGATTTTGCGCATAAGATAAGATAAATCCCCTTCATAATGCGTTCCAGCTTGTAGCCAAATTGGTAGCTACTTGCTTGAATACCAGTTGTTGTGAAGTAGGATAGTTGTAGAAGATAGACTTCTTTAGTGGCATTCAGGACATAAATTTGAGAACCATCCCCTGCGTTCTTCTACCGTGTGCGAGTTTGCAATTCTGAAGCAATTCACTGCACACCTGTCTTTTCTGGTGGAACCCTGGATATGCCATAAAGTTGATGATACATATGGTCTGTTGCCGTGACTTGCATAGTCAGGGATGGTCGTTAAAGTTCACCCAGCTTAAAATAGTGGTTAGGCATTTGAAATAATAAAGTACGGGCTAGAGTTTTATAAATTCCTCTGCACAAGGAGTACAGTTTTTGGAAATTTGAGGTGGTAAAGAAGGCAAGACGTGCTCTTTTCTTCTGATATTTTGATCATGTTCAGTATTCCTTATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCACTTTCCGTCGTCTTCTTCCCACTCAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATCGGTTGAACTTTGGAGATAATTGGGACCGTGATGCTCATGATCCTCTAGGAAAGATTCTTTCCAACAGAATTGATAAAGATGCTTTGCGAAGGTCTCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCACAGAAGGGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACTAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTTCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCCCAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACGTCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTTAATATGGCTGAAGCTTTGGTGCAGTCTCCATCTCGAACTCGTACTGCTCCCCAGGTATCTGAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTAGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTGCTTAGTTCTTCGGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCATCGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCACGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGTATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTGTGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACTGGAACAACATTGGAAAAAAGACCGTCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCCTCAATCGGCCAATCTAATGAACTAACAAGCGAAGAAATGGGCATTCCCGCAAGTCCTCGTGTTATTGAAAATGGTGCCGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAATATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAAATTGGTCGATGCATTCAGCCAAAGATATTTGTTCCATCTGAATCTCGCGAGGACAGCAAGGATGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGAATTACATTTTTCTTTTTCACCCATGAGAAGTTCTAGTTCACATTTTTTAATGGCAGTGGGGTTAGTTCTTTTTTCTTTTTTTCCCCCTTTTTAAATTTTTTCCCCTTCTTTTTTGTTTTTGATGGTTTAAAAGAAATGCTGATGAGAGTTGGTTGGGTTGGAAGAAGAGAGGTGGATGTTAATTGAACACTGAACAGTGCAAATAGTGAAATAAGTTACAGTTGCCCAAATCATCCTTGCTGCCTACCTTTACAGCAGAGGAGTTTTTCCGGTTTTTGAAAAAGGGCAGTTGCTGAGGTTTGGCAGGCCTTAAAGATGTGTATGCAAATTTGCATCTTTTGGTTTATTTTTGCATTTCTTTCTTTCTTTCTTTCTTTTTTTAATTCTGGAAGTTACTAGGAAAAAAAAGTTACTCCTTTCAAGGAAATTGGGAAGTTGTGGAAAATTGAAAAAGGTTTCTAACTTCATTCGGCGTATATTGACTTATTGTTTGAAACGTTACCTTTTTAGAGTTGGGGTAGTGTTAGACTTGTTTTGACATTGAATTGCAC

Coding sequence (CDS)

ATGGAAAGAAGTGAACCCACATTAGTCCCAGAATGGTTGAGAAGTACTGGAAGCGTTACTGGTGGCGGCAATTCAAACCACCACTTTCCGTCGTCTTCTTCCCACTCAGATGTGCCCTCTCTATCTCAATCGAGAAATAGAATTTCCAAGACCACTGGCGATTTTGACACTTCGCGTTCTTCTTTTCTGGATCGGACATCTTCATCAAATTCAAGGAGAAGTTCGAGCAATGGTTCTTCTAAACATGCATATAGTAGCTTTAACAGGGGTCATCGTGATAAGGATCGTGAGAAAGAAAAGGATCGGTTGAACTTTGGAGATAATTGGGACCGTGATGCTCATGATCCTCTAGGAAAGATTCTTTCCAACAGAATTGATAAAGATGCTTTGCGAAGGTCTCATTCAATGGTATCCAGGAAGCAAGGTGAGTTGTTTCACAGAAGGGTTGGAACAGAACTAAAAAGTCACAACAGCAGCAATGGAATTCTTTCTGGAACTAGTGTCGGCAGTAGCATTCAGAAAGCTGTATTTGAAAAGGATTTTCCGTCACTGGGATCTGAAGAAAAGCAGGGAGCATCAGAAATTGGAAGAGTTTCATCTCCTGGTTTGAGCTCACCAGTTCAAAGCTTACCTATTGGCAATTCAGCCTTAATTGTTGGTGGAGAGGGATGGACCTCTGCTCTTGCGGAGGTGCCCAGTATGATTGGAAGCACCCCAGGGTCATCGTCATTTCAACAAACTGTTCCTGCTACGTCAGGGGCAGGGCCTCTGAGTGTGACAGCCGGACTTAATATGGCTGAAGCTTTGGTGCAGTCTCCATCTCGAACTCGTACTGCTCCCCAGGTATCTGAGTTATCTGTCAAGACCCAGAGGCTTGAGGAATTAGCTATTAAACAGTCCAGGCAATTAATACCAGTGACGCCTTCTATGCCAAAAGCTATGGTGCTTAGTTCTTCGGATAAATCAAAGCCCAAATTGGCATCAAGAACTGGAGAACTTAATGCAACCATCAAGGGTGGACAGCCACAACCATCGTCAGTTCATGCCAACCAATCTCGTGTAGGACATGTCAAGCCCGATGCTCAAAAGAGTTCTCACGGGAAGTTTCTTGTTTTGAAACCTGTACGAGAAAATGGTGTCTCCCTTGCAGCAAAGGATGTCTCAAGTCCAACTAGTAATGCAAACAGTATGGCAGCAAACAGCCAGTTCGCTCTTGCACCTTCAGTTCCACATGCTCCTTTGAGAAGCCCAAATAATACAAATGTTTCTTCTGTGGAGCGCAAAATTGCTAGCTTAGATCTCAAAACTGGAACAACATTGGAAAAAAGACCGTCCTTATCCCAAGTCCAGAGCCGGAATGATTTCTTTAACCTCATTAAGAAGAAAACTTCAATGAGTTCTTCTGCTGTTCTCTCAGATTCATGCTCTTCTGTGAAGTCTCCCTCAATCGGCCAATCTAATGAACTAACAAGCGAAGAAATGGGCATTCCCGCAAGTCCTCGTGTTATTGAAAATGGTGCCGTGGAGAATAGAAATGGCAATAGTTCTGAAGAGGTTCAAATATCTCGTGACAGTGGTGAAAAAACTGAGAGCCACGTTGCTGCAGAATCTCTAGATGAAGAGGAGGCTGCTTTTCTTCGTTCTCTTGGATGGGATGAAAGCTGTGGTGAGGACGAAGGCCTTACTGAAGAAGAAATCAATTCTTTCTATCGGGAGTACATGAACTTGAAGCCATCTCTAAAAATTGGTCGATGCATTCAGCCAAAGATATTTGTTCCATCTGAATCTCGCGAGGACAGCAAGGATGATGGAGCCGGTTCTGAATTGAGCTCATCTGACTCAGAAGCCTGA

Protein sequence

MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRSSFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDSKDDGAGSELSSSDSEA

Homology

[Close]

BLAST of Pay0007589 vs. ExPASy TrEMBL
Match: A0A5D3DT29 (Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001070 PE=4 SV=1)

HSP 1 Score: 1136.3 bits (2938), Expect = 0.0e+00
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of Pay0007589 vs. ExPASy TrEMBL
Match: A0A1S3CDT9 (mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1136.3 bits (2938), Expect = 0.0e+00
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of Pay0007589 vs. ExPASy TrEMBL
Match: A0A1S3CC42 (mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499274 PE=4 SV=1)

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 613/616 (99.51%), Postives = 613/616 (99.51%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 613

[Close]

BLAST of Pay0007589 vs. ExPASy TrEMBL
Match: A0A0A0KN63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1)

HSP 1 Score: 1097.0 bits (2836), Expect = 0.0e+00
Identity = 598/616 (97.08%), Postives = 604/616 (98.05%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP  VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 615

[Close]

BLAST of Pay0007589 vs. ExPASy TrEMBL
Match: A0A6J1FM76 (uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC111445235 PE=4 SV=1)

HSP 1 Score: 989.2 bits (2556), Expect = 7.8e-285
Identity = 545/617 (88.33%), Postives = 570/617 (92.38%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLR+TGSVTGGGNSNHHF S S HSDVPS SQ RNR SKTTGDFDTSR 
Sbjct: 1   MERSEPTLVPEWLRNTGSVTGGGNSNHHFQSPSPHSDVPSQSQPRNRTSKTTGDFDTSRP 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           +FLDRT+SSNSRRSSSNGS+KHAYSSFNRGHRDKDREKEKDR NFGDNWDRD+HDPLGK+
Sbjct: 61  AFLDRTASSNSRRSSSNGSAKHAYSSFNRGHRDKDREKEKDRFNFGDNWDRDSHDPLGKL 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSH-NSSNGILSGTSVGSSIQKAVFEK 180
           L NR+DKDALRRSHSMVSRKQ ELFHRRV T+LK+  NSSNG+  G SVGSSIQKAVFEK
Sbjct: 121 LPNRVDKDALRRSHSMVSRKQDELFHRRVATDLKAGVNSSNGMPPGISVGSSIQKAVFEK 180

Query: 181 DFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTP 240
           DFPSLGSEEKQGASEIGRVSSPGLSS VQSLPIGNSALIVGGEGWTSALAEVPSMIGST 
Sbjct: 181 DFPSLGSEEKQGASEIGRVSSPGLSSSVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTT 240

Query: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQ 300
           GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ SELSVKTQRLEELAIKQ
Sbjct: 241 GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQASELSVKTQRLEELAIKQ 300

Query: 301 SRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKP 360
           SRQLIPVTPSMPKA  L+SSDKSKPKLASRTGELN T+KGGQP PSSVHANQSR GHVK 
Sbjct: 301 SRQLIPVTPSMPKASALNSSDKSKPKLASRTGELNVTVKGGQPLPSSVHANQSRGGHVKS 360

Query: 361 DAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 420
           DAQKSSHGKFLVLKP RENGVS  AKDVSSPTSN     ANSQFALAPSVPHAPLRSPNN
Sbjct: 361 DAQKSSHGKFLVLKPARENGVSPTAKDVSSPTSN-----ANSQFALAPSVPHAPLRSPNN 420

Query: 421 TNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480
           +NV+SVERK+ASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK
Sbjct: 421 SNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVK 480

Query: 481 SPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLD 540
           SPSIGQSNELT EE+  PASP V+ENG VEN NG+SSEEV+ S DSGEKTE+HVAAESLD
Sbjct: 481 SPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSGEKTETHVAAESLD 540

Query: 541 EEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRED 600
           EEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYM+LKPSLK+GR IQPKI VPSES ED
Sbjct: 541 EEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSIQPKISVPSESHED 600

Query: 601 SKDDGAGSELSSSDSEA 617
           SK DGAGSELSSSDSEA
Sbjct: 601 SK-DGAGSELSSSDSEA 611

[Close]

BLAST of Pay0007589 vs. NCBI nr
Match: XP_008460469.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo] >KAA0067384.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa] >TYK26525.1 mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1136.3 bits (2938), Expect = 0.0e+00
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 616

[Close]

BLAST of Pay0007589 vs. NCBI nr
Match: XP_008460470.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis melo])

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 613/616 (99.51%), Postives = 613/616 (99.51%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQ---LSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS
Sbjct: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 613

[Close]

BLAST of Pay0007589 vs. NCBI nr
Match: XP_004140377.1 (mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1097.0 bits (2836), Expect = 0.0e+00
Identity = 598/616 (97.08%), Postives = 604/616 (98.05%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQVSELSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQVSELSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP  VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 615

[Close]

BLAST of Pay0007589 vs. NCBI nr
Match: XP_011655200.1 (mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativus] >KGN51281.2 hypothetical protein Csa_009411 [Cucumis sativus])

HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 595/616 (96.59%), Postives = 601/616 (97.56%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSV GGGN NHHFPSSSSHSDVPSLSQSRNRISKTTGDFD+SRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVAGGGNPNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDSSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI
Sbjct: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180
           LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD
Sbjct: 121 LSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFEKD 180

Query: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTPG 240
           FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST G
Sbjct: 181 FPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGSTTG 240

Query: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIKQS 300
           SSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R APQ   LSVKTQRLEELAIKQS
Sbjct: 241 SSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARAAPQ---LSVKTQRLEELAIKQS 300

Query: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVKPD 360
           RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQP  VHANQSRVGHVKPD
Sbjct: 301 RQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPLLVHANQSRVGHVKPD 360

Query: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNT 420
           AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNN 
Sbjct: 361 AQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPNNI 420

Query: 421 NVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSVKS 480
           NVSS+ERKIASLDLKTGTTLEKRPSLSQVQSRNDFF LIKKKTSM+SSAVLSDSCSSVKS
Sbjct: 421 NVSSMERKIASLDLKTGTTLEKRPSLSQVQSRNDFFKLIKKKTSMNSSAVLSDSCSSVKS 480

Query: 481 PSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESLDE 540
           PSIGQSNELTSEEMG  ASPRVIENGAVENRNGNSSEEVQ+SRDSGEKTESHVAAESLDE
Sbjct: 481 PSIGQSNELTSEEMG-TASPRVIENGAVENRNGNSSEEVQVSRDSGEKTESHVAAESLDE 540

Query: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESREDS 600
           EEAAFLRSLGWDESCGEDEGLTEEEINSFYREY+NLKPSLKIGRCIQPKIFVPSESR DS
Sbjct: 541 EEAAFLRSLGWDESCGEDEGLTEEEINSFYREYVNLKPSLKIGRCIQPKIFVPSESRVDS 600

Query: 601 KDDGAGSELSSSDSEA 617
           KDDGAGSELSSSDSEA
Sbjct: 601 KDDGAGSELSSSDSEA 612

[Close]

BLAST of Pay0007589 vs. NCBI nr
Match: XP_038907227.1 (mediator of RNA polymerase II transcription subunit 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1022.3 bits (2642), Expect = 1.7e-294
Identity = 565/618 (91.42%), Postives = 584/618 (94.50%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           MERSEPTLVPEWLRSTGSVTGG NSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS
Sbjct: 1   MERSEPTLVPEWLRSTGSVTGGSNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDNWDRDAHDPLGKI 120
           +FLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGD+WDRD+ DPLGKI
Sbjct: 61  AFLDRTSSSNSRRSSSNGSSKHAYSSFNRGHRDKDREKEKDRLNFGDSWDRDSPDPLGKI 120

Query: 121 LSNRIDKDALRRSHSMVSRKQG--ELFHRRVGTELKSHNSSNGILSGTSVGSSIQKAVFE 180
           LSN+IDKDALRRSHSMVSRK G  ELFHRR  TELK+HN+SNGILSGTSV SSIQKAVFE
Sbjct: 121 LSNKIDKDALRRSHSMVSRKLGERELFHRRAATELKNHNNSNGILSGTSVSSSIQKAVFE 180

Query: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240
           KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST
Sbjct: 181 KDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVPSMIGST 240

Query: 241 PGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRLEELAIK 300
            GSSSFQQTVPATSGAGPLSVTAGLNMAEALVQ+PSR R  PQVSELSVKTQRLEELAIK
Sbjct: 241 TGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQAPSRARATPQVSELSVKTQRLEELAIK 300

Query: 301 QSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELNATIKGGQPQPSSVHANQSRVGHVK 360
           QSRQLIPVTPSM KAMVL+ SDKSKPKLASRTGELN TIKGGQ QP SVHANQSR G VK
Sbjct: 301 QSRQLIPVTPSMTKAMVLNPSDKSKPKLASRTGELNVTIKGGQQQPLSVHANQSRGGLVK 360

Query: 361 PDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPSVPHAPLRSPN 420
            DAQKS+HGKFLVLKPVRENG+SLAAKDVSSPTSNANSMA NSQFALA +V HAPLRSPN
Sbjct: 361 SDAQKSAHGKFLVLKPVRENGISLAAKDVSSPTSNANSMAVNSQFALASAVAHAPLRSPN 420

Query: 421 NTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSSSAVLSDSCSSV 480
           NTNVSSVERKIASLDLK+GTTLEKRPSLSQVQSRNDFFNLIKKKTSM SSAVLSDSCSSV
Sbjct: 421 NTNVSSVERKIASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSM-SSAVLSDSCSSV 480

Query: 481 KSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGEKTESHVAAESL 540
           KSPSI  SNELT EE  +PASPRVIENGAVENRNG+ SEEV+ S D+GEKTESHVAAESL
Sbjct: 481 KSPSISHSNELTREETDMPASPRVIENGAVENRNGDGSEEVRASCDTGEKTESHVAAESL 540

Query: 541 DEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRCIQPKIFVPSESRE 600
           DEEEAAFLRSLGWDE+CGEDEGLTEEEINSFYREYMNLKPSLK+GRCI+PKIFVPSES E
Sbjct: 541 DEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMNLKPSLKMGRCIKPKIFVPSESHE 600

Query: 601 DSKDDGAGSELSSSDSEA 617
           DSK DGAGSELSSSDSEA
Sbjct: 601 DSK-DGAGSELSSSDSEA 616

[Close]

BLAST of Pay0007589 vs. TAIR 10
Match: AT1G36990.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). )

HSP 1 Score: 417.9 bits (1073), Expect = 1.4e-116
Identity = 307/614 (50.00%), Postives = 388/614 (63.19%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLS-QSRNRISKTTGDFDTSR 60
           M++ E +L PEWLRS+G  +GGG+SNH   SSSSHSD  SL   SRNR S++  D D+  
Sbjct: 1   MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSASLQYNSRNRNSRSKSDVDSIH 60

Query: 61  SSFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDAHDPL 120
           S FLDR+SS+NSRR SSNGS+KHAYSS  FNR  RDKDR ++KDR+++ D WD D   PL
Sbjct: 61  SPFLDRSSSTNSRRGSSNGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPL 120

Query: 121 GKILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSS-----NGILSGTSVGSSI 180
             IL+ R D D LRRSHSMV+RKQGE   R +   L +  SS     NG+LSG S+G+S 
Sbjct: 121 RTILTGR-DPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSF 180

Query: 181 QKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEVP 240
           Q+  F+KDFPSLG+EEKQ   ++ RVSSPG+SS VQ+LP+GNSALI GGEGWTSALAEVP
Sbjct: 181 QRTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVVQNLPVGNSALI-GGEGWTSALAEVP 240

Query: 241 SMIGSTPGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQRL 300
           ++I      S       A S AG L+  +GLNMAEALVQ+P+RT T PQ    SVKTQRL
Sbjct: 241 NVIEKACTGSLTSPKANAVS-AGTLTGPSGLNMAEALVQAPARTHTPPQG---SVKTQRL 300

Query: 301 EELAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGE-LNATIKGGQPQPS----SV 360
           E+LAIKQSRQLIPV PS PK + L+SSDKSK K   RTGE   A  +    QP+    S 
Sbjct: 301 EDLAIKQSRQLIPVVPSAPKGLSLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSF 360

Query: 361 HANQSRVGHVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQ-FALA 420
            +N S  G +KP+       K LVLKP RENGVS A K+  SP++N N+ AA+SQ  +  
Sbjct: 361 QSNPS--GQIKPEK------KLLVLKPARENGVS-AVKESGSPSANTNTRAASSQLMSNT 420

Query: 421 PSVPHAPLRSPNNTNVSSVERKIAS-LDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSM 480
            S   AP+RS N    S  E K AS   + +G T+EK+PS +Q QSR+ F++ +K+K + 
Sbjct: 421 QSTQSAPVRSTN----SPKELKGASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTA 480

Query: 481 SSSAVLSDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDS 540
           S+S + +D  SS  S S     +L S +  I + P         +    S  EV  S   
Sbjct: 481 STS-ITTDPVSSSTSASSSVEVKLNSSKDLIASDP--------SSSQATSGVEVTDSVQV 540

Query: 541 GEKTESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSLKIGRC 600
              T    A ++ DEEEA FLRSLGW E+ GE E LTEEEI+SF  +Y  L+P       
Sbjct: 541 ASHTSGFEATDTPDEEEAQFLRSLGWVENNGE-EYLTEEEIDSFLEQYKELRP------L 579

[Close]

BLAST of Pay0007589 vs. TAIR 10
Match: AT4G08510.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). )

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-84
Identity = 254/593 (42.83%), Postives = 338/593 (57.00%), Query Frame = 0


Query: 1   MERSEPTLVPEWLRSTGSVTGGGNSNHHFPSSSSHSDVPSLSQSRNRISKTTGDFDTSRS 60
           ME+ EP+LVPEWLRS+G  +G G+SN       S SD  SL  S+NR +++  D D+  S
Sbjct: 1   MEKREPSLVPEWLRSSGHGSGVGSSN-------SLSD--SLRNSKNRNARSRSDADSVGS 60

Query: 61  SFLDRTSSSNSRRSSSNGSSKHAYSS--FNRGHRDKDREKEKDRLNFGDNWDRDAHDPLG 120
            FLDR+SS+N+RR SSNGS+KHAYSS  FNR +RDKDR +EKDR+++ D WD D+  P G
Sbjct: 61  PFLDRSSSTNTRRGSSNGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFG 120

Query: 121 KILSNRIDKDALRRSHSMVSRKQGELFHRRVGTELKSHNSSN-------GILSGTSVGSS 180
             L  R  ++ LRRSHSM +RKQG   H   G  +   N  N       GIL GTS   S
Sbjct: 121 TFLIGR-GEEPLRRSHSMTTRKQGN--HLAQGFTVGYKNGGNINTFNGHGILPGTSPVKS 180

Query: 181 IQKAVFEKDFPSLGSEEKQGASEIGRVSSPGLSSPVQSLPIGNSALIVGGEGWTSALAEV 240
            ++  F KDFP L  EE+ G  ++ R+SSPG S   QSL + N ALI+ GEGWTSALAEV
Sbjct: 181 SKRMGFNKDFPLLRGEERNGGPDVVRISSPGRSPTAQSLSVANPALII-GEGWTSALAEV 240

Query: 241 PSMIGSTPGSSSFQQTVPATSGAGPLSVTAGLNMAEALVQSPSRTRTAPQVSELSVKTQR 300
           P++I  + G+ S      + + +GP    A  NMAEALVQ+P RT T PQ        Q 
Sbjct: 241 PNVIEKSGGAESHANVGNSATLSGP----ACRNMAEALVQAPGRTGTPPQ-------AQT 300

Query: 301 LEELAIKQSRQLIPVTPSMPKAMVLSSSDKSKPKLASRTGELN-ATIKGGQPQPSSVHAN 360
           LE+ AI+QSRQLIPV PS PK  V +SSDKSK K   R+GE   A+ +  Q Q S +  N
Sbjct: 301 LEDRAIRQSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLGN 360

Query: 361 -QSRVG-HVKPDAQKSSHGKFLVLKPVRENGVSLAAKDVSSPTSNANSMAANSQFALAPS 420
            QS  G  +KPD  K    K ++LKP RENGV           S  NS  A SQ   APS
Sbjct: 361 MQSNPGSQIKPDTTK----KLVILKPARENGVVAGG-------SPPNSRVAASQPTTAPS 420

Query: 421 VPH-APLRSPNNTNVSSVERKIASLDLKTGTTLEKRPSLSQVQSRNDFFNLIKKKTSMSS 480
               A +RS N       + + AS+++  G   EK+ SL+Q QSR+ F++ +K+KT  + 
Sbjct: 421 TQFTASVRSTNGPR----DLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCTNI 480

Query: 481 SAVLSDSCSSVKSPSIGQSNELTSEEMGIPASPRVIENGAVENRNGNSSEEVQISRDSGE 540
           S   S + S + S    Q+N         P+SP+  E   +        E V+   +  E
Sbjct: 481 STDPSKTSSCILSSVEEQANSSKELVASDPSSPQAAERDEI-------MESVEKVSNVAE 540

Query: 541 KTESHVAAESLDEEEAAFLRSLGWDESCGEDEGLTEEEINSFYREYMNLKPSL 581
           +     +A   D +EAAFL+SLGWDE+  ++   T EE+  + +++   KPSL
Sbjct: 541 RISRFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREWCKKF---KPSL 544

The following BLAST results are available for this feature:

BLAST of Pay0007589 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0007589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DT29	0.0e+00	100.00	Mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CDT9	0.0e+00	100.00	mediator of RNA polymerase II transcription subunit 1 isoform X1 OS=Cucumis melo...	[more]
A0A1S3CC42	0.0e+00	99.51	mediator of RNA polymerase II transcription subunit 1 isoform X2 OS=Cucumis melo...	[more]
A0A0A0KN63	0.0e+00	97.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G387430 PE=4 SV=1	[more]
A0A6J1FM76	7.8e-285	88.33	uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]

BLAST of Pay0007589 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460469.1	0.0e+00	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cuc...	[more]
XP_008460470.1	0.0e+00	99.51	PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cuc...	[more]
XP_004140377.1	0.0e+00	97.08	mediator of RNA polymerase II transcription subunit 1 isoform X1 [Cucumis sativu...	[more]
XP_011655200.1	0.0e+00	96.59	mediator of RNA polymerase II transcription subunit 1 isoform X2 [Cucumis sativu...	[more]
XP_038907227.1	1.7e-294	91.42	mediator of RNA polymerase II transcription subunit 1 isoform X1 [Benincasa hisp...	[more]

BLAST of Pay0007589 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G36990.1	1.4e-116	50.00	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXP...	[more]
AT4G08510.1	1.1e-84	42.83	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 592..616
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..537
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 521..537
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 472..492
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..608
None	No IPR available	PANTHER	PTHR34112:SF13	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..615
None	No IPR available	PANTHER	PTHR34112	C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN	coord: 1..615

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007589.1	Pay0007589.1	mRNA