Pay0007453 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007453
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrotransposon gag protein
Location	chr05: 11505168 .. 11506157 (+)
RNA-Seq Expression	Pay0007453
Synteny	Pay0007453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTAGAGAAAAGACCCTTAGAGAGCTTGCCAAGCCCGATGAAGGACCAAAGACCTCTTTGTATAGTCATACCCCCAACCACTCAACCTTTTGAATTAAAACCGGGACTTATCCATCTTTTGCCCATCTTTAAAGAAAGTTTCGGAGAGGACCCACACAAACATCTTAAGGATTTTCATATGGTTTATGATTCCATGAGACCTCACGACATCTCAGAAGAACAACTAAATTTACGAGCCTTTCCTTTTTACCTTACGGATGTAGCAAAGAGATGGTTCTACTACTTAGAACCGGGTTCCATAACGACTTGGGGTAGTCTAAAAAAGAGATTCTTAGAGAAATTTTTCCCCGCCTCTAGAGCAAAAAATATTAGGAAAGAAATTTATGAGATAAGACAAGCCTTTGGAGAATCCCTCTTGGAATACTAGGAAAGATTCAAAGAGCTTTGTGCTAGCTTTCCTCACCATCATATTTCCGACCCTTCTTTAATTCAATATTTTTACTCCGGTCTTTTGTCTTCCGACAGGAATATGGTAGATGCGGCGGCTGGAGGAGCTCTAGCCGACAAGACCCCCACCGAAGCAAGGGAGCTCATTTCAAGAATGACAGAAAATTCTCAAAGCTTTGGGAATAGAGCATCGGAGCTTGAAAATTTTCTAACAAAAGTGGTAAGTGAATTAAAATCACAAATGTTAAATATGACTACTCTTCTTACTTCTTTATTACAAGGTACTCCTCTTAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGTCATCCAAATGACAAATGTCCCGAGGTGATCGAGGATATAAACATTGTTCGAAAATATGACCCCCACGGTAATACATACAATTCGGGGTGGAGAGACAACCCAAACTTAAGATGGGGGAATGACAACCAAAAGCATATACAAGCACCACCCACCTCTTCAAACCAAGGTATGAATCTTGAAGATATTATCAAAGCTTTGGCTGGCAACTAA

mRNA sequence

ATGAAGTTAGAGAAAAGACCCTTAGAGAGCTTGCCAAGCCCGATGAAGGACCAAAGACCTCTTTGTATAGTCATACCCCCAACCACTCAACCTTTTGAATTAAAACCGGGACTTATCCATCTTTTGCCCATCTTTAAAGAAAGTTTCGGAGAGGACCCACACAAACATCTTAAGGATTTTCATATGGTTTATGATTCCATGAGACCTCACGACATCTCAGAAGAACAACTAAATTTACGAGCCTTTCCTTTTTACCTTACGGATGTAGCAAAGAGATGGTTCTACTACTTAGAACCGGGTTCCATAACGACTTGGGGTAGTCTAAAAAAGAGATTCTTAGAGAAATTTTTCCCCGCCTCTAGAGCAAAAAATATTAGGAAAGAAATTTATGAGATAAGACAAGAAAGATTCAAAGAGCTTTGTGCTAGCTTTCCTCACCATCATATTTCCGACCCTTCTTTAATTCAATATTTTTACTCCGGTCTTTTGTCTTCCGACAGGAATATGGTAGATGCGGCGGCTGGAGGAGCTCTAGCCGACAAGACCCCCACCGAAGCAAGGGAGCTCATTTCAAGAATGACAGAAAATTCTCAAAGCTTTGGGAATAGAGCATCGGAGCTTGAAAATTTTCTAACAAAAGTGGTAAGTGAATTAAAATCACAAATGTTAAATATGACTACTCTTCTTACTTCTTTATTACAAGGTACTCCTCTTAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGTCATCCAAATGACAAATGTCCCGAGGTGATCGAGGATATAAACATTGTTCGAAAATATGACCCCCACGGTAATACATACAATTCGGGGTGGAGAGACAACCCAAACTTAAGATGGGGGAATGACAACCAAAAGCATATACAAGCACCACCCACCTCTTCAAACCAAGGTATGAATCTTGAAGATATTATCAAAGCTTTGGCTGGCAACTAA

Coding sequence (CDS)

ATGAAGTTAGAGAAAAGACCCTTAGAGAGCTTGCCAAGCCCGATGAAGGACCAAAGACCTCTTTGTATAGTCATACCCCCAACCACTCAACCTTTTGAATTAAAACCGGGACTTATCCATCTTTTGCCCATCTTTAAAGAAAGTTTCGGAGAGGACCCACACAAACATCTTAAGGATTTTCATATGGTTTATGATTCCATGAGACCTCACGACATCTCAGAAGAACAACTAAATTTACGAGCCTTTCCTTTTTACCTTACGGATGTAGCAAAGAGATGGTTCTACTACTTAGAACCGGGTTCCATAACGACTTGGGGTAGTCTAAAAAAGAGATTCTTAGAGAAATTTTTCCCCGCCTCTAGAGCAAAAAATATTAGGAAAGAAATTTATGAGATAAGACAAGAAAGATTCAAAGAGCTTTGTGCTAGCTTTCCTCACCATCATATTTCCGACCCTTCTTTAATTCAATATTTTTACTCCGGTCTTTTGTCTTCCGACAGGAATATGGTAGATGCGGCGGCTGGAGGAGCTCTAGCCGACAAGACCCCCACCGAAGCAAGGGAGCTCATTTCAAGAATGACAGAAAATTCTCAAAGCTTTGGGAATAGAGCATCGGAGCTTGAAAATTTTCTAACAAAAGTGGTAAGTGAATTAAAATCACAAATGTTAAATATGACTACTCTTCTTACTTCTTTATTACAAGGTACTCCTCTTAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGTCATCCAAATGACAAATGTCCCGAGGTGATCGAGGATATAAACATTGTTCGAAAATATGACCCCCACGGTAATACATACAATTCGGGGTGGAGAGACAACCCAAACTTAAGATGGGGGAATGACAACCAAAAGCATATACAAGCACCACCCACCTCTTCAAACCAAGGTATGAATCTTGAAGATATTATCAAAGCTTTGGCTGGCAACTAA

Protein sequence

MKLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIFKESFGEDPHKHLKDFHMVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASRAKNIRKEIYEIRQERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVDAAAGGALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTSLLQGTPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGNDNQKHIQAPPTSSNQGMNLEDIIKALAGN

Homology

[Close]

BLAST of Pay0007453 vs. ExPASy TrEMBL
Match: A0A5A7SRF5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00500 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.7e-143
Identity = 261/328 (79.57%), Postives = 280/328 (85.37%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIFKESFGEDPHKHLKDFH 61
           ++ ++ +  L    +DQRPLCIVI  TTQPFELKP LIHLLPIFK + GEDPHKHLKDFH
Sbjct: 63  EVREKTIRKLDELDEDQRPLCIVISLTTQPFELKPRLIHLLPIFKGNSGEDPHKHLKDFH 122

Query: 62  MVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASR 121
           MV DSMRPH ISEEQLNLRAFPF LTDVAKRW YYLEPGSITTWGSLKK+FLEKFFPASR
Sbjct: 123 MVCDSMRPHGISEEQLNLRAFPFSLTDVAKRWLYYLEPGSITTWGSLKKKFLEKFFPASR 182

Query: 122 AKNIRKEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVD 181
             NIRKEIY IRQ          E+FKELCA+FPHHHI  PSLIQYFY GLLSSDRN VD
Sbjct: 183 TNNIRKEIYGIRQAFGESLLKYWEKFKELCANFPHHHIFYPSLIQYFYFGLLSSDRNTVD 242

Query: 182 AAAGGALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTS 241
           AAAGGALA+K PTEARELISRM +NSQ FGNRASELEN LTK VSELKSQMLNMTTLLTS
Sbjct: 243 AAAGGALANKIPTEARELISRMAKNSQRFGNRASELENSLTKEVSELKSQMLNMTTLLTS 302

Query: 242 LLQGTPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGND 301
            +QGTPLKVTKC VCGLVGHPNDKCPEVIE++NIV+KYDP+ NTYN+GWRDNP LRWGND
Sbjct: 303 FVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWRDNPILRWGND 362

Query: 302 NQKHIQAPPTSSNQGMNLEDIIKALAGN 320
           NQKH QAP TSSNQ  NL+DIIKALA N
Sbjct: 363 NQKHTQAPTTSSNQSTNLKDIIKALATN 390

[Close]

BLAST of Pay0007453 vs. ExPASy TrEMBL
Match: A0A1S3CD34 (uncharacterized protein LOC103499500 OS=Cucumis melo OX=3656 GN=LOC103499500 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.3e-129
Identity = 241/300 (80.33%), Postives = 256/300 (85.33%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIF-KESFGEDPHKHLKDF 61
           ++ ++ L  L  P +DQRPLCIV+PPTTQPFELKPGLIHLL IF K S+GEDPHKHLKDF
Sbjct: 3   EVREKTLRELVEPDEDQRPLCIVMPPTTQPFELKPGLIHLLAIFIKGSYGEDPHKHLKDF 62

Query: 62  HMVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPAS 121
           HMV DSMRPH I EEQLNLRAFPF L DVAKRW YYLE  SITTWGS KK+FLEKFFPAS
Sbjct: 63  HMVCDSMRPHGILEEQLNLRAFPFSLMDVAKRWLYYLEASSITTWGSQKKKFLEKFFPAS 122

Query: 122 RAKNIR-----KEIYEIRQERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVDAAAG 181
           RA NIR      E      ERFKELCASFPHHHI DPSLIQYFYSGLLS DR  VDAAAG
Sbjct: 123 RASNIRIRQAFGESLSEYWERFKELCASFPHHHIFDPSLIQYFYSGLLSFDRITVDAAAG 182

Query: 182 GALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTSLLQG 241
           GAL +KTPTEARELISRM ENSQSFGNRASEL++ LTK VSELKSQMLNMTTLLTS +  
Sbjct: 183 GALVNKTPTEARELISRMAENSQSFGNRASELDDSLTKEVSELKSQMLNMTTLLTSFVH- 242

Query: 242 TPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGNDNQKH 296
           TPLKVTKCGVCGLVGH NDKCPE+IED+NIVR+YDPHGNTYNSGWRDNPNLRWGNDNQKH
Sbjct: 243 TPLKVTKCGVCGLVGHLNDKCPELIEDVNIVRRYDPHGNTYNSGWRDNPNLRWGNDNQKH 301

[Close]

BLAST of Pay0007453 vs. ExPASy TrEMBL
Match: A0A5A7USL5 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004630 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 7.0e-128
Identity = 244/328 (74.39%), Postives = 258/328 (78.66%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIFKESFGEDPHKHLKDFH 61
           ++ ++ L  L  P +D RPLCIVIPPTTQPFELKPGLIHLLPIFK S GEDPHKHLKDFH
Sbjct: 3   EVREKILRELAEPNEDHRPLCIVIPPTTQPFELKPGLIHLLPIFKGSSGEDPHKHLKDFH 62

Query: 62  MVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASR 121
           MV DSMRP+ ISEEQLNLRAFPF+LTDVAK W YYLEPGSITTWGSLKK+FLEKFFPASR
Sbjct: 63  MVCDSMRPYSISEEQLNLRAFPFFLTDVAKIWLYYLEPGSITTWGSLKKKFLEKFFPASR 122

Query: 122 AKNIRKEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVD 181
           A NIRKEIY IRQ          ERFKELCAS PH+HI DPSLIQYFYSGLLS DRN VD
Sbjct: 123 ANNIRKEIYGIRQAFGESLSKYWERFKELCASLPHYHIFDPSLIQYFYSGLLSFDRNTVD 182

Query: 182 AAAGGALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTS 241
           AA GGALADKTPTEAR+LISRM ENSQSFGNRASEL+N LTK VSELKSQMLNMTTLLTS
Sbjct: 183 AATGGALADKTPTEARKLISRMMENSQSFGNRASELDNSLTKEVSELKSQMLNMTTLLTS 242

Query: 242 LLQGTPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGND 301
            +QGTPLKVTKCGVCGLVGHPNDKCPEVIED+NIVR+YDPHG                  
Sbjct: 243 FVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRRYDPHGT----------------- 297

Query: 302 NQKHIQAPPTSSNQGMNLEDIIKALAGN 320
                           NLEDIIKALA N
Sbjct: 303 ----------------NLEDIIKALATN 297

[Close]

BLAST of Pay0007453 vs. ExPASy TrEMBL
Match: A0A5A7V0Q7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00020 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 4.1e-120
Identity = 220/263 (83.65%), Postives = 231/263 (87.83%), Query Frame = 0


Query: 67  MRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASRAKNIR 126
           MRPH IS+EQLNLRAFPF LTDVAKRW YY+EPGSITTWGSLKK+FLEKFFPASRA NIR
Sbjct: 1   MRPHGISKEQLNLRAFPFSLTDVAKRWLYYVEPGSITTWGSLKKKFLEKFFPASRANNIR 60

Query: 127 KEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVDAAAGG 186
           KEIY IRQ          +R KELCASFPHHHISDPSLIQYF+SGLLS DRN +D  AGG
Sbjct: 61  KEIYGIRQAFGESLSKYWKRSKELCASFPHHHISDPSLIQYFHSGLLSFDRNTIDVVAGG 120

Query: 187 ALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTSLLQGT 246
           ALADKTPTEARELISRM ENSQSFGNRASEL+N LTK VSELKSQMLNMTTLLTS +QGT
Sbjct: 121 ALADKTPTEARELISRMVENSQSFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGT 180

Query: 247 PLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGNDNQKHI 306
           P KVTKCGVCGLVGHPNDKC +VIED+NIVR+YDPH NTYNSGWRDNPNLRWGNDNQKH 
Sbjct: 181 PPKVTKCGVCGLVGHPNDKCLKVIEDVNIVRRYDPHSNTYNSGWRDNPNLRWGNDNQKHT 240

Query: 307 QAPPTSSNQGMNLEDIIKALAGN 320
           QAP TSSNQG NLEDIIKAL  N
Sbjct: 241 QAPSTSSNQGTNLEDIIKALGTN 263

[Close]

BLAST of Pay0007453 vs. ExPASy TrEMBL
Match: A0A5A7ULC7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29G00020 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 5.4e-120
Identity = 233/328 (71.04%), Postives = 248/328 (75.61%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIFKESFGEDPHKHLKDFH 61
           K+ ++ L+ L  P +DQRPLCIVIPPTTQPFELK GLIHLLPIFK               
Sbjct: 3   KVREKTLKELVDPDEDQRPLCIVIPPTTQPFELKQGLIHLLPIFKGK------------- 62

Query: 62  MVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASR 121
                                        KRW YYLEPGSITTWGSLKK+FLEKFFPAS+
Sbjct: 63  -----------------------------KRWLYYLEPGSITTWGSLKKKFLEKFFPASK 122

Query: 122 AKNIRKEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVD 181
           A NIRKEIY IRQ          ERFKELCASFP  HIS+PSLIQYFYSGLLSSD+N VD
Sbjct: 123 ANNIRKEIYGIRQAFGESLSRYWERFKELCASFPFLHISNPSLIQYFYSGLLSSDKNTVD 182

Query: 182 AAAGGALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTS 241
           AAAGGALADKTP EA+ELISRM ENSQSFGNRASEL N LTK VSE+KSQMLNMTTLLTS
Sbjct: 183 AAAGGALADKTPIEAQELISRMAENSQSFGNRASELVNSLTKEVSEIKSQMLNMTTLLTS 242

Query: 242 LLQGTPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGND 301
            +QGTP+KVTKCGV G VGHPNDKCPEVIED+NIV+KYDPHGNTYNSGWRDNPNLRWGND
Sbjct: 243 FVQGTPIKVTKCGVFGFVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNPNLRWGND 288

Query: 302 NQKHIQAPPTSSNQGMNLEDIIKALAGN 320
           NQ H QAPPTSSNQG NLE IIKALA N
Sbjct: 303 NQTHTQAPPTSSNQGTNLEVIIKALATN 288

[Close]

BLAST of Pay0007453 vs. NCBI nr
Match: KAA0031967.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 516.5 bits (1329), Expect = 1.6e-142
Identity = 261/328 (79.57%), Postives = 280/328 (85.37%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIFKESFGEDPHKHLKDFH 61
           ++ ++ +  L    +DQRPLCIVI  TTQPFELKP LIHLLPIFK + GEDPHKHLKDFH
Sbjct: 63  EVREKTIRKLDELDEDQRPLCIVISLTTQPFELKPRLIHLLPIFKGNSGEDPHKHLKDFH 122

Query: 62  MVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASR 121
           MV DSMRPH ISEEQLNLRAFPF LTDVAKRW YYLEPGSITTWGSLKK+FLEKFFPASR
Sbjct: 123 MVCDSMRPHGISEEQLNLRAFPFSLTDVAKRWLYYLEPGSITTWGSLKKKFLEKFFPASR 182

Query: 122 AKNIRKEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVD 181
             NIRKEIY IRQ          E+FKELCA+FPHHHI  PSLIQYFY GLLSSDRN VD
Sbjct: 183 TNNIRKEIYGIRQAFGESLLKYWEKFKELCANFPHHHIFYPSLIQYFYFGLLSSDRNTVD 242

Query: 182 AAAGGALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTS 241
           AAAGGALA+K PTEARELISRM +NSQ FGNRASELEN LTK VSELKSQMLNMTTLLTS
Sbjct: 243 AAAGGALANKIPTEARELISRMAKNSQRFGNRASELENSLTKEVSELKSQMLNMTTLLTS 302

Query: 242 LLQGTPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGND 301
            +QGTPLKVTKC VCGLVGHPNDKCPEVIE++NIV+KYDP+ NTYN+GWRDNP LRWGND
Sbjct: 303 FVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWRDNPILRWGND 362

Query: 302 NQKHIQAPPTSSNQGMNLEDIIKALAGN 320
           NQKH QAP TSSNQ  NL+DIIKALA N
Sbjct: 363 NQKHTQAPTTSSNQSTNLKDIIKALATN 390

[Close]

BLAST of Pay0007453 vs. NCBI nr
Match: XP_008460738.1 (PREDICTED: uncharacterized protein LOC103499500 [Cucumis melo])

HSP 1 Score: 472.6 bits (1215), Expect = 2.6e-129
Identity = 241/300 (80.33%), Postives = 256/300 (85.33%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIF-KESFGEDPHKHLKDF 61
           ++ ++ L  L  P +DQRPLCIV+PPTTQPFELKPGLIHLL IF K S+GEDPHKHLKDF
Sbjct: 3   EVREKTLRELVEPDEDQRPLCIVMPPTTQPFELKPGLIHLLAIFIKGSYGEDPHKHLKDF 62

Query: 62  HMVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPAS 121
           HMV DSMRPH I EEQLNLRAFPF L DVAKRW YYLE  SITTWGS KK+FLEKFFPAS
Sbjct: 63  HMVCDSMRPHGILEEQLNLRAFPFSLMDVAKRWLYYLEASSITTWGSQKKKFLEKFFPAS 122

Query: 122 RAKNIR-----KEIYEIRQERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVDAAAG 181
           RA NIR      E      ERFKELCASFPHHHI DPSLIQYFYSGLLS DR  VDAAAG
Sbjct: 123 RASNIRIRQAFGESLSEYWERFKELCASFPHHHIFDPSLIQYFYSGLLSFDRITVDAAAG 182

Query: 182 GALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTSLLQG 241
           GAL +KTPTEARELISRM ENSQSFGNRASEL++ LTK VSELKSQMLNMTTLLTS +  
Sbjct: 183 GALVNKTPTEARELISRMAENSQSFGNRASELDDSLTKEVSELKSQMLNMTTLLTSFVH- 242

Query: 242 TPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGNDNQKH 296
           TPLKVTKCGVCGLVGH NDKCPE+IED+NIVR+YDPHGNTYNSGWRDNPNLRWGNDNQKH
Sbjct: 243 TPLKVTKCGVCGLVGHLNDKCPELIEDVNIVRRYDPHGNTYNSGWRDNPNLRWGNDNQKH 301

[Close]

BLAST of Pay0007453 vs. NCBI nr
Match: KAA0058150.1 (uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa])

HSP 1 Score: 466.8 bits (1200), Expect = 1.4e-127
Identity = 244/328 (74.39%), Postives = 258/328 (78.66%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIFKESFGEDPHKHLKDFH 61
           ++ ++ L  L  P +D RPLCIVIPPTTQPFELKPGLIHLLPIFK S GEDPHKHLKDFH
Sbjct: 3   EVREKILRELAEPNEDHRPLCIVIPPTTQPFELKPGLIHLLPIFKGSSGEDPHKHLKDFH 62

Query: 62  MVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASR 121
           MV DSMRP+ ISEEQLNLRAFPF+LTDVAK W YYLEPGSITTWGSLKK+FLEKFFPASR
Sbjct: 63  MVCDSMRPYSISEEQLNLRAFPFFLTDVAKIWLYYLEPGSITTWGSLKKKFLEKFFPASR 122

Query: 122 AKNIRKEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVD 181
           A NIRKEIY IRQ          ERFKELCAS PH+HI DPSLIQYFYSGLLS DRN VD
Sbjct: 123 ANNIRKEIYGIRQAFGESLSKYWERFKELCASLPHYHIFDPSLIQYFYSGLLSFDRNTVD 182

Query: 182 AAAGGALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTS 241
           AA GGALADKTPTEAR+LISRM ENSQSFGNRASEL+N LTK VSELKSQMLNMTTLLTS
Sbjct: 183 AATGGALADKTPTEARKLISRMMENSQSFGNRASELDNSLTKEVSELKSQMLNMTTLLTS 242

Query: 242 LLQGTPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGND 301
            +QGTPLKVTKCGVCGLVGHPNDKCPEVIED+NIVR+YDPHG                  
Sbjct: 243 FVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRRYDPHGT----------------- 297

Query: 302 NQKHIQAPPTSSNQGMNLEDIIKALAGN 320
                           NLEDIIKALA N
Sbjct: 303 ----------------NLEDIIKALATN 297

[Close]

BLAST of Pay0007453 vs. NCBI nr
Match: KAA0061138.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 441.0 bits (1133), Expect = 8.5e-120
Identity = 220/263 (83.65%), Postives = 231/263 (87.83%), Query Frame = 0


Query: 67  MRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASRAKNIR 126
           MRPH IS+EQLNLRAFPF LTDVAKRW YY+EPGSITTWGSLKK+FLEKFFPASRA NIR
Sbjct: 1   MRPHGISKEQLNLRAFPFSLTDVAKRWLYYVEPGSITTWGSLKKKFLEKFFPASRANNIR 60

Query: 127 KEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVDAAAGG 186
           KEIY IRQ          +R KELCASFPHHHISDPSLIQYF+SGLLS DRN +D  AGG
Sbjct: 61  KEIYGIRQAFGESLSKYWKRSKELCASFPHHHISDPSLIQYFHSGLLSFDRNTIDVVAGG 120

Query: 187 ALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTSLLQGT 246
           ALADKTPTEARELISRM ENSQSFGNRASEL+N LTK VSELKSQMLNMTTLLTS +QGT
Sbjct: 121 ALADKTPTEARELISRMVENSQSFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGT 180

Query: 247 PLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGNDNQKHI 306
           P KVTKCGVCGLVGHPNDKC +VIED+NIVR+YDPH NTYNSGWRDNPNLRWGNDNQKH 
Sbjct: 181 PPKVTKCGVCGLVGHPNDKCLKVIEDVNIVRRYDPHSNTYNSGWRDNPNLRWGNDNQKHT 240

Query: 307 QAPPTSSNQGMNLEDIIKALAGN 320
           QAP TSSNQG NLEDIIKAL  N
Sbjct: 241 QAPSTSSNQGTNLEDIIKALGTN 263

[Close]

BLAST of Pay0007453 vs. NCBI nr
Match: KAA0056713.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-119
Identity = 233/328 (71.04%), Postives = 248/328 (75.61%), Query Frame = 0


Query: 2   KLEKRPLESLPSPMKDQRPLCIVIPPTTQPFELKPGLIHLLPIFKESFGEDPHKHLKDFH 61
           K+ ++ L+ L  P +DQRPLCIVIPPTTQPFELK GLIHLLPIFK               
Sbjct: 3   KVREKTLKELVDPDEDQRPLCIVIPPTTQPFELKQGLIHLLPIFKGK------------- 62

Query: 62  MVYDSMRPHDISEEQLNLRAFPFYLTDVAKRWFYYLEPGSITTWGSLKKRFLEKFFPASR 121
                                        KRW YYLEPGSITTWGSLKK+FLEKFFPAS+
Sbjct: 63  -----------------------------KRWLYYLEPGSITTWGSLKKKFLEKFFPASK 122

Query: 122 AKNIRKEIYEIRQ----------ERFKELCASFPHHHISDPSLIQYFYSGLLSSDRNMVD 181
           A NIRKEIY IRQ          ERFKELCASFP  HIS+PSLIQYFYSGLLSSD+N VD
Sbjct: 123 ANNIRKEIYGIRQAFGESLSRYWERFKELCASFPFLHISNPSLIQYFYSGLLSSDKNTVD 182

Query: 182 AAAGGALADKTPTEARELISRMTENSQSFGNRASELENFLTKVVSELKSQMLNMTTLLTS 241
           AAAGGALADKTP EA+ELISRM ENSQSFGNRASEL N LTK VSE+KSQMLNMTTLLTS
Sbjct: 183 AAAGGALADKTPIEAQELISRMAENSQSFGNRASELVNSLTKEVSEIKSQMLNMTTLLTS 242

Query: 242 LLQGTPLKVTKCGVCGLVGHPNDKCPEVIEDINIVRKYDPHGNTYNSGWRDNPNLRWGND 301
            +QGTP+KVTKCGV G VGHPNDKCPEVIED+NIV+KYDPHGNTYNSGWRDNPNLRWGND
Sbjct: 243 FVQGTPIKVTKCGVFGFVGHPNDKCPEVIEDVNIVQKYDPHGNTYNSGWRDNPNLRWGND 288

Query: 302 NQKHIQAPPTSSNQGMNLEDIIKALAGN 320
           NQ H QAPPTSSNQG NLE IIKALA N
Sbjct: 303 NQTHTQAPPTSSNQGTNLEVIIKALATN 288

The following BLAST results are available for this feature:

BLAST of Pay0007453 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0007453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRF5	7.7e-143	79.57	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CD34	1.3e-129	80.33	uncharacterized protein LOC103499500 OS=Cucumis melo OX=3656 GN=LOC103499500 PE=...	[more]
A0A5A7USL5	7.0e-128	74.39	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7V0Q7	4.1e-120	83.65	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7ULC7	5.4e-120	71.04	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Pay0007453 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031967.1	1.6e-142	79.57	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotranspos...	[more]
XP_008460738.1	2.6e-129	80.33	PREDICTED: uncharacterized protein LOC103499500 [Cucumis melo]	[more]
KAA0058150.1	1.4e-127	74.39	uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]	[more]
KAA0061138.1	8.5e-120	83.65	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0056713.1	1.1e-119	71.04	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0007453 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 81..162 e-value: 1.4E-11 score: 44.5
None	No IPR available	PANTHER	PTHR24559:SF334	SUBFAMILY NOT NAMED	coord: 53..290
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 53..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007453.1	Pay0007453.1	mRNA