Pay0007400 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007400
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	single-stranded DNA-binding protein WHY2, mitochondrial
Location	chr09: 1139613 .. 1150040 (-)
RNA-Seq Expression	Pay0007400
Synteny	Pay0007400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTCGTGTACGATATAATTTAAGATGTTACATTGGGTTAAAGCAACCGCTACTCTTAGTATGAATTACTCTTTGTTTTGTTGTGTTTGGTTGATTTTTTTGTTGTTTTATAGATAATATTTATGGAAGAAGAAAAAGATATATCATAACTCATTAGTAATTGAAATTCCGTTCATTGTCAAGCAGTACGCACCCTTTTCAAGACGGGGTTTCCGTCATTTCTTCGCTCACACTCTCTTTAAATTTGACCGAACCCTTCCGTTTTCACCTCTCATTCCATAAGCAGAAGCATGAGCACAAGCAGGATGATGAAGCTTACGCGCTTGTTTTCACGGTACCAACTTCTCACCTGAAACCCTACTTCTTTACTACCACTTTTGCTTTGAAGAGCTTTCTTTGCTTTCTCCTTTCAAATTTCTGCTTAGTTACTCATTTAATCAAAACCCCAACTGGAACTTCGAGCTCTGTCATTCAACCTTCATTTGTTACCTCCCATTTCCCTCTCATGCCATTGCTATTCATTATCGTCCATTCTTTTCTCTTCCTTGCTTTCTCTCCACAATGTTACCCACCTTTCTTCTACCATTTTGTTTGTTTGCTTGTCTGTCTGTCTGTCTGTCTGGGTTTTCATTCTATTGGAATTTTAGAGTTGACTTCTTGGGATATTTCTTATGATTTTTCAACTCAAGTAGACGGGTTTTGTTCTTATTTTGTGTATTTTGATTGTCTTGTTCTTGGTTAAAGTAGCTATTGGGGTTCTCAGCAGCTTTACACTGGGTTTACTTTGAAAAATGTAACTATGGAATGGTGGGATCTTCCATTAATTCCAAGCTTTTTAGGATTTATCAAATGTAACTTCATTATGTGCTTTTCTGAAAATAGAACTGGTGGTTGCTGAGGCAACTAAGTGTCTACTATTGACATTTGGTTGCATTTCTTATCTATACGCATTTATTAATACATGAAAAGAAATACTGTTCTAAAGTTGTAGGGAAAACCAGTCATTAAAGAACATGTTTTCTATATTTAACTCGGTCGATTAGTTTGGAAGTGTTTTGATACTTCTTCCTGATTATCTAATTTGTTTGATATATTTGATTCACTTGTCACTTGTGAATTTCCTTTTGAAAAGTCTACTTCTGCTTCAAGACCCAGACTGGAGACGTCAAAAGTTTCCTTATTATGTTCACCCAAAGATTTGAACACAAGACCTCTGGCTAGGTGTTACTCTAGTTGTCAATTATTAATTGCTATCTCTATTTTTTTTATCTCCTATCAAATTTCGTGATCGATACAATCTTTAATTTTCCCCAGTATTTAACTTTCCCCAATACGGCAGTATTTCTTTTCCCTTCGTAATAGGATGGCTGTAAAGAGAATGATCAAGTAGGTTGTTAACATCACTTGGAAGGAACGAGGATTCTTAACTAGCATGGAATGAACTTATAGATTTGGTTGGATCTAAATTATAGTGCTCTCTCTCTTCTAACCTTGTTCACTTCCAAAAAAAATTGACTTTTTTTACTGTTTTCTGTATAATCTATTCTCTATAATTTTTAATTTGTGATTTACTTTTTGTTCATTCCTTGTTGTGAATTTGTAGATTAATAGTACTATGTAACCACAGATTTAGTACCTACTTTTCTTTTAGTTCCCCCCCCTTCCTTTCATAGGCGCTGAGCTTAAGATTCAATTAATAATTTTCATAATACTACATGAAAGCAGGAACCAGCTATTTGAACAAATTGTATGTAAGAAAGATGGTTATGTTGGACATCCTTTGGGATCACACCCTTTCTCAACTCGTGCTGGGATTCCAAATATTACACAGAATTTTACTCATACAGGTATAGTTTTTGGCAATTATGGTTTAATGCATTTTGAAGTTTCATCTGCTAGCAATATACCGTGTGTGCGTCTTCATTTTTCTACTTTGGCATAAGTGTGAGCTTATGGTGTAGTGAAGATTAAACAATTTGAATAAAAGATTAAATTTTTTTTCAAACATCATTCAGTCCTTACAATTCTTTCTAGCTCTCTCAACTCGTTTCCATTTCTTATCAATATTTTCTATATCTTTGAGTCTTACTCTTTCAAGATGCGGGGACCCCTGGCCATTTAAACCCATGGCCTCAACACTGCTCTTAAGGACTCAACATCCTTCTTTTGACTATTTATACCCAAGGCCTCGATGACTTAGCAATGTATTAGCCATTGACCCTTTATACCCAAGGTTCATTTCTTGTCTCAAAACTCATCACACTGACCCTTGATCATTTATACGGTTATACCCAGGGCTTTGATGCTCCTCTTTATCCAATATTGGCATATTGATCACTGACCATTAATACCTTAGGCCTTAACGCCCAATGTGGCATACTAGCCCTTGACGATTTATACTAGAGGCCTTGATCTTCACTCACTTTAATTACAATGTCATTCCTTCACCATTTATACTTGAGGCCCTTATATTCCCTTAATTTCCAAGTTCAAAGACATCATTTCTGTTTGTTGTGTGTAATGGTTAATTGTTTTTGCTCTTTCAGTGACAAAGAATGCAGGTGGTCGAGCTTTTGTTTCCTATCATGTGTATAAGGGCAAAGCTGCAGTCTCCATTGAACCTTGTATGCCAACTTTCACTAAAGTAGAGGTATATAATGATATATATCTATACATATATTTATTTATTTATAATAAGTAAAATCAATTTTGTTCTCATTCTTTGAATGTGTATCATAGTCTGGGAATCTTATAATAGATCGACGTGGTTCAATAATGCTGACATTCGCTCCTGCCATGGGCGAGCGCAAGTATGATTGGACAAGGAAACAGGTTACTTTTCATTCTCCATTCTCTGTATTTGTAGCCCAGATGTTTACAAGAAGTTTCCGTTGATTGTAATGTTTATAACTTCCATAACCACCAAAGGTTGGTCAAGTGGTAAAAAGGGGTCTTGGGTTGTTTAATAAAGAACTTAGAGAGCATGAGTTCAATTTATGGGAGCCACTTACTTAAGATTTAATATCCTATCAATTTCTTTGGCACCCAAATGTTGTAGGGTAAAACTAGTTGTCCCATGAGATTAGTCGAGATGCGGGTAAGTTGGCCCATTGATATATATAAAGAAAAAAAGCTGTAACTTCATGATTACCGGCATGTAGGAAAACAAATACATCCTCTATTGTAATATTATTAACTTTCATGATACACACTAACTAGGGATGGAAGTATGTCAAAAGGAGGATTCTGTTTTCTAGGTTTGAATTGCATCTGGAATATTCTATCAACCTTCTACTATTCTCCAAAAGATAGCCCTAACTTGGTTGACCTATTTCACTTGAGCACATGTAGCTAATACTGTATCTTTCCTGATTGATTCAATTACCATCTTTCCTGATTGATTCAATTACCTTCTTGCAGTTGTTTGCGTTGTCCGCAACAGAGGTTGGTTCTTTAATCAGTATGGGTCCCAAGGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGGTTGGTTCCGTAGTACCAAGATTGCATTCAAGCATTGTTGTATTTCCCTGAAGCATTTGAAACTTTTGCAGCATGGTCTAATCAAATATCATTCCTACTTCGTATACAATAAATATCCATTTCATATGAAAATAAATTAGTCATAAAATAAACACATAAATAAATAAAAATAAAAAATAAAAGCAGGCTGCTAACTGCTACAATTATGATCAGGTATGAACAAAAACGAACTAAATATCTTATATTCGGTCATTTTGGTTCACTTTTTTGAGTAATTTCTTGCAGTACTGCTGGTCAAGTAAGGAAGAACTTAGCTATTAAGGCTCATACAGATGGCAACGGCTATATGATCTCTTTGAGTAAGAATAGAAACATATTATAAAAATAGTGTATTGTTACTTTTATTGCTCTTTTACAATGCTATTTGCAAATATTTTCATTGGATTGAGGTGCTTTTTAAAAAAAAAATCAATCGTCTATTCAAGCTTCTTGGTAAGAATGTGCTCACAAAGGGAATATTTCGCTGCTGAAGCCAGTTCATTTTAAAATCAGATAGGGCTGCATGGCTTTTTCTACTCGATAGAATTAGAATGCTTTGCCTTCCTTACTGCGAACTCTTTGTGTGCATAGGCACCTTTTCCTAATTGTTCCTAGCTACTTCCTCTATTACATATGGAATGTGAAAGAACACCAACTGTGGGTGATTTTATTCAATGGAATAACAAGAACGATTACAAGGAATTGGCAGAACACCAAATCCTGAATAAGAACAAAGCACTTCAGGAGAATGGAAAGGAAAACCATGCCCTTCTCTATGCCTTTCCTATCTTTCAAGGAATAGACAAACGCCTCACACAATTTCCATATCCTCGTTCAATGACTCCCTCTCTAATTAAACCTTCCCCTATTCCTAACTAACTGTAGGTCCCAGGCTTTGTAGCAATTCTACCCATTACATGTGCATTCATTGGTACTGGTCATTCCCTTATTGCTCCAATTTTTTCAAGATCAACTTCCACCCTTTCCCCCGAAATGACATGCCTCAAATATTCCACTCTTGCCCGAGCAAAGTGGCATGTAGTCACGTTTGCATAAAATTCATGTTCTCCCAAAACCTCCAGCACCAGCTCCAAATTTTTCAAGCAATCCTTCAGGTTCTTACTCAAATTTTCTCACGTAAGGCTTAAAGATTGTATTCACCAAGGATTGAAAAGTAGAGGGAGCATTGCTTTACTGAAAACTCATAATGCCCTTCATGAGTTCTAAAAGTTGTTTTCTCCACGTCGCCTGGATGCATTCGTATTTGACGATAACCTGCCTTCAAGTCAATCTTCAGAAACATACTTGCTCTATTCTCTTCAATAATTGGTATTGGAAACTTATCTGGAATTGTCACATTATTCAGTGCATTATAATCTACACAAAACCTCTAGCTACCATCTTTCTTCTTCACCGATAGAACAAGGCTAGAATACGGACTAGTACTTGGCCGCATAACTCTGGATGTTAACATCTCATCCACTAATTTCTGCATCCCTTCTTTCTGTTGGTAAGCATATCTATATGGGCATACATTAACTAGGTCAGTCCTTCAAATGAATATGATGTTCAATGCTCCTTGGTGGAAGTTCCTTTGGCCAATCAAAAACATCTTCAAATTTAGATAACAGCGCGGATATTGATTGAGCTATGAGGGTACTTCATCAACTCCATACAGTTCTAACCACCGCATTCCCCCTTCCCTAGCTTTACATTCAATCAGGAATCCTTTATTTGATGGTGACCAAGACTTTATTCCTTCAAGCTTACCCTAGCTTAACTTGCTAGGATCACCATTCAATACTACACTCTGACCTTCTTGATTAAATGTCATGGTCAAATTCTGCCAATCAACCTATGTTACAGCCAGCGAGTGTAACCATCGCATTCCCAAGATTACATCCACTCCCCCAACTCCAAGGGTAAGAAACTAGTGTTTTACACTCTCCAATCACTAGCTCAACGCCCTCACAAACTGTCTTCCCTTTTACTGCTAAACTAGAGCCAAACATTTCTCCATAATTAGAGGTTTCTTCTGTGAGCAATTTCAACAACGATACCAATTTTTCTGGAATAAAATTATGTATCGCCCCACAATCAATTAATATGATCACCGACTCCTCTTGGATCTTTCCTTTCAGTCTCATAGTCCTTGGGTTCGTCATGCCAACCACAAAATTAATTGATATCTTTGCCTTCGATTTCAAATCAGCTTCAACCTCCAGGATTTTTAATTCCTTTTCCTCCCCTTGATCATTCTCTTCAATTACTTCAACTTCCTCATCATTCTCCCATACCACTAGGATTCTTAACTCCCTCTGTTCTTTAATTTTGCAATGATGACATGCAAAATATCTTTCACCGCAATTCAAACATAGCCCCTTATCCATTTGAGCTTGAAATTCAGCATCAGACATCCTTCTTGTCAGACCTTCACGTTGATTTCCCACCATTGTCGCTCTTTTCAACGTAATCGTTTGCATTGGAAAATTCTCTCTCGTTTTATTATCTTTTATCATTTGTCGGCATATTAGGTTTAATAAAATTCAAATTACTTTGGGCCTTACCTTCACAATCTTCGAAGCCTGCTTCCTTCTGCATAACCTTTCGATTTTCCACACGTTGGGCTAGCTTCATCATTTGCGCAAGCCCAATTGGCTCCCAACACTCTACCTCTATCTTAATCCATGGGCTAAGCCCATTCATGAACATCTCCTCCAAAACTTCCTTTGGCAAAGGTGCTAACAGCTTATCAAGCAGATTCTGATACTCCTTCACAGTAGCCTCTGGCTTGATTGCTAAAAATTGTTTGCATATCGTACCTTTTCTCATTGATTTGAAGCGAATTAACAATATCTGCTTCAATTCTGGCCTATCTTTGGAAGGCTCACGTTCTTGCAATTGTAACCAATCCAACGTTGCTCCATCCAAACTGATAACAGCTACAGTCATCTTCTCCAAACTCATCAGTTTATGAATCTGAAAATATCAATCCGCTCTACATAAGGATCTATGCCGCTAAAAACCGACATCTCAAATTTCTTGAACTTACCTCAATCGTTAGAGCCTTCATCTCCTTCTGGTTCAGTTTCGTGCGCCGTGTTTTTCCTCCTTCAACATTACTTTCTATCAATTTTCCCTTACTCGACGATTCTTCCATACTTCCAGTGGTAGTAGAACGGCATTTCATTACTCCTTCCACATACATCATACATCATCAACAACAGTTGATGTTTCTCTGCCTGAACTTCTATCCTTTTGGTGCTCTTTGCCAACTATAAGGGATTCTCCTCAATTGTTGGCAACTTATGCAATTCTACTTGCATTCTTGAAATCTCTTGATCAAATACTTCCAACTTCTCCTCAAAACGCCTCTGTGCCATCTTCCTACTTTTTCCCAAGTTAATATTGCTCTAATACCAATATGATAGAACACCAACTGTGGATGATACTTATTCAATGGAATAACAAGAATGATTACAAGGAATTGGCAGAATACCAAATCTTGAACAAGAACAAAGACACTTAACAAAATGGAAAACGTACACTTCTCTCTATCTTTCCCATCTTTCAAGGAATAGAAAAGTGCCTCACACAATTTCCATATCCTCACTCAATGACCCCCTCACTATTTAAACCTTACCCTATTCTTAACTAACTGCGGGTCCCAGCCTTGGCAGCAATAATACCCATTACACGTGCACTCCCCTTACTCCCTCTCCTATACTGCCATATAATAGGTGGCCTAACAGAATGAAAGTTTGAATTTGATCATCCATGTTTCCCAGTTGGGATGTTGTAGAAAGCAAATCGTGACTTTGAAGATTAGATATGTGAGCTTATTTTTTATTACCAGTTATTAAAAGCAATTAACAACCCGAGACTTACGTGAAAACCCGAGAATCGAGAGAAAAACCAATATGTCTTTAGTTTTAGTATTTTTCTTATGAAGATATAAATGGGTACAAAGGGAGAGAATAAATAGAATACAATAATAGTAAGAAAGGAAAAGATTTTGGAAATATTTAGGAAATAAATCTTATATTTTATTTCCAAAATACTCAAGGCAACCTTCTAATTTTAACACTAGTACTTAACCGTGCGATGCCCATGATACTCTACATTTTTCAATATCAGATTTCACATTCTCTTTGAATTAATATTTGTTTCCTTTTTAGATTCTCTTGATAATTTATATATGCAAAGATAACTGAAGAAGTAAAAAAAAATGCTAAAATAAGAGAAGGGTATAAGACTTCAAGTACCTTTAATAAACATAAAAAAAATTAGAACCTAAAAGGAAAAACGGGGAAAAGGTGAAGATGATTTAAGATTTTTTATTTGAAAGATAAGACTTCAAGAATATTTTAAAAAAGAGAGATGGTAATTAACACAAAATTTCTTAAATTATGACAAATAGTTTCTTTCAAGATAGGTTACTTGATTCTAAAATATATCATAAAATAAAAGACTACATCACATTATTTATTATTGGAGGCAAGAAGAAGAATTAAGTATATTACTAAGAAAGATAAAACATAAAACATAATTGTGTTACCAAGTATTAAAGTCCTATCAAGTGTGCTTGTCTTTTTTTAGTACAAAAAAGAAAAAACAAAGTCAATAATGAAAATATAATAACAAAGTAAACATCCATATTGATGGTCTACAAAGACACAAAAATAATCTTCTAACTTCTTTTTTTTAAGAATATTCTTCTAACCTGCAAAATCATTCCACAAACATTTGCTGGCATGAGTAGAAGAGATACATAATTACTAAAAACTATTGAAGTGCAACGAAAATCTTTAATAATTTTTTGTCTTTGTCTGTCAATCATACAAAAAATAATTTGCCAGAGGAAAAAGTGTAGATGAAGGAACAAAAAAAGTCCTTACCTATCATTCTTTAAATTAAAAAATGAATTTTGAGAGAAATTGGGTTGTGTGCAAAAGAAACCAAGAGAAGGCAAGTTTTAGAAGATGTAGTGAAGAAGACTCCTTTTATTGTAACAAGAATGACATTGCAATAAAAACTATCACTTCCAAAGTTTTGAAACCAATGTAATTATAAATTAAAGGTAAAGTCATAAATTTTAGAGTGGTTTTCTTTTTAGAAATAAATGGATAAAGACATTTCATATTATACATTCTTCACATTTAATTACCTTTAATGATAATTAATAATTAGAAATCATTTTTATTAATAGTACTCAAATAAAAGGTTAATGATAAAAGAAAGAAAAACTAAAAAAACAATTACAGCAACGTGGATAGTGGTGTGAGATAGCCTGTGAGAGTTGATTCAAGTGATTTAATTATCAATATTACATTTGATTTAAAAATGACAAAATTACCCATCAAATATATAATGAAAATGGTTATAAAGGAAGGGTAAAATAGGGAGAAAAAGTTTCTCCATATAGAGACTTTTATATTATAGTATAGATTTATAATTATCTGTTTGCTGTCTGGGTGGCGGTTCAACTTTATTCTTCCATATTCTAGTCTCACGCTTGGTTTCCATTTTCTTTTTAATCTATTTCTCTCGATCAACTTATCTGCTGCCATTATTCTTGTGAAGAACTTACCAGGAGATGAATTTATCTCCTTTCCTTTTCTGCAGATGTTGTTAATAAACCACAAAACACCAACGATTTCTTGAGCCTTCCCTTCACAACAGGCGAATTTTCTGTGCTGAAGACTGCTTGCAGTGTATGAATTGAATCTCTAATTTATCTTTTAGGCCATTAGAATATATTTTATCCTTTTCCTGTGTTCGCTGATTATTTAATATGAGATGTATTTAAGTGAAGTGTCATCGTTCTTGAGCTAGTTGAGCTGCATTGTCGTCTAGTAGATGATCTTGTCATATAGCAAAAAACAACCAAGAAAAATGAAACAAATTGAACATAAATAGGAAGCCTAGGCAATAGAAGGAGTTACAAAACTTAGATGCTTTGGGATGGCATAGCCTTAAAGTATTAAATATCAAATGAGTTGTGCCAACTATAATAGAGTATAGTGTGGTGTTCTTGTAGGATTAGTTGGAGTGCTTGTAACTTGTAAGTTTATTTGATCGTCACGGTTAATAGTTGCCAAGTAGGAATTTGGGTTTAGTATTTCTATTCAGTGCTTGGGGTGCAACGTGCAAGTTTGAGTAAAATGAGAAAAGTGAAATGGTGGGACTACCATAATTATGAGAAAAACGTGAAGTAAAATGTTGTACCTAAGGTTTAGATGATTTACTCTAAAAGAAGAAAACCGTGCTCCAACCCACCCCTACTCCTTGTGTTATCTTCAATGTGTTCATTGGATTGCTGGTAGATTTGAATGGTACATGTCACTTATATGTTAGGTATTTGCTTTCTTCCGTTCCCATCCATCATCTTGGGTGTACTCATTCGATAAACTTATATGTTTTATTCTTCGGATGTTCTCTTAGTTTGCTCTGCCTAGCCTTCTTGGTTGGGACCGGGTGTTCAATCCTAATATTGGCATGGGTAACGGTTTTCAATCAAAAAGAATTGATCGTGAAGCATTGAGTTTAGAGTGGGAAAGATGAATGTCCGTAGAAATGTCACTTCCAGGAAGCTGAAGCTGCTAAAGTTCAAATTTGGGCTAATCTTGTCACCTCTTCAACTTCTGTAGTGCGATGGATGTATCCTTCGAATTTTGCTTTACAGAAACTCTAGTTGGTGGCAGTGTACTAAATAATTTTTTGTATCTGAAAGGCAATGGATTATTTGGATGGGACTTCATTTCTGAAAAAACAAGTAACAATGTACACAAGCACTTTTGTTAACTGTTCTTGAGTTAGAGATATGCTTCTAGTCTATTATTTGCATGATATCACTAATCTCTTCACATTGACC

mRNA sequence

GATTCGTGTACGATATAATTTAAGATGTTACATTGGGTTAAAGCAACCGCTACTCTTAGTATGAATTACTCTTTGTTTTGTTGTGTTTGGTTGATTTTTTTGTTGTTTTATAGATAATATTTATGGAAGAAGAAAAAGATATATCATAACTCATTAGTAATTGAAATTCCGTTCATTGTCAAGCAGTACGCACCCTTTTCAAGACGGGGTTTCCGTCATTTCTTCGCTCACACTCTCTTTAAATTTGACCGAACCCTTCCGTTTTCACCTCTCATTCCATAAGCAGAAGCATGAGCACAAGCAGGATGATGAAGCTTACGCGCTTGTTTTCACGGAACCAGCTATTTGAACAAATTGTATGTAAGAAAGATGGTTATGTTGGACATCCTTTGGGATCACACCCTTTCTCAACTCGTGCTGGGATTCCAAATATTACACAGAATTTTACTCATACAGTGACAAAGAATGCAGGTGGTCGAGCTTTTGTTTCCTATCATGTGTATAAGGGCAAAGCTGCAGTCTCCATTGAACCTTGTATGCCAACTTTCACTAAAGTAGAGTCTGGGAATCTTATAATAGATCGACGTGGTTCAATAATGCTGACATTCGCTCCTGCCATGGGCGAGCGCAAGTATGATTGGACAAGGAAACAGTTGTTTGCGTTGTCCGCAACAGAGGTTGGTTCTTTAATCAGTATGGGTCCCAAGGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGTACTGCTGGTCAAGTAAGGAAGAACTTAGCTATTAAGGCTCATACAGATGGCAACGGCTATATGATCTCTTTGAATGTTGTTAATAAACCACAAAACACCAACGATTTCTTGAGCCTTCCCTTCACAACAGGCGAATTTTCTGTGCTGAAGACTGCTTGCAGTTTTGCTCTGCCTAGCCTTCTTGGTTGGGACCGGGTGTTCAATCCTAATATTGGCATGGGTAACGGTTTTCAATCAAAAAGAATTGATCGTGAAGCATTGAGTTTAGAGTGGGAAAGATGAATGTCCGTAGAAATGTCACTTCCAGGAAGCTGAAGCTGCTAAAGTTCAAATTTGGGCTAATCTTGTCACCTCTTCAACTTCTGTAGTGCGATGGATGTATCCTTCGAATTTTGCTTTACAGAAACTCTAGTTGGTGGCAGTGTACTAAATAATTTTTTGTATCTGAAAGGCAATGGATTATTTGGATGGGACTTCATTTCTGAAAAAACAAGTAACAATGTACACAAGCACTTTTGTTAACTGTTCTTGAGTTAGAGATATGCTTCTAGTCTATTATTTGCATGATATCACTAATCTCTTCACATTGACC

Coding sequence (CDS)

ATGAGCACAAGCAGGATGATGAAGCTTACGCGCTTGTTTTCACGGAACCAGCTATTTGAACAAATTGTATGTAAGAAAGATGGTTATGTTGGACATCCTTTGGGATCACACCCTTTCTCAACTCGTGCTGGGATTCCAAATATTACACAGAATTTTACTCATACAGTGACAAAGAATGCAGGTGGTCGAGCTTTTGTTTCCTATCATGTGTATAAGGGCAAAGCTGCAGTCTCCATTGAACCTTGTATGCCAACTTTCACTAAAGTAGAGTCTGGGAATCTTATAATAGATCGACGTGGTTCAATAATGCTGACATTCGCTCCTGCCATGGGCGAGCGCAAGTATGATTGGACAAGGAAACAGTTGTTTGCGTTGTCCGCAACAGAGGTTGGTTCTTTAATCAGTATGGGTCCCAAGGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGTACTGCTGGTCAAGTAAGGAAGAACTTAGCTATTAAGGCTCATACAGATGGCAACGGCTATATGATCTCTTTGAATGTTGTTAATAAACCACAAAACACCAACGATTTCTTGAGCCTTCCCTTCACAACAGGCGAATTTTCTGTGCTGAAGACTGCTTGCAGTTTTGCTCTGCCTAGCCTTCTTGGTTGGGACCGGGTGTTCAATCCTAATATTGGCATGGGTAACGGTTTTCAATCAAAAAGAATTGATCGTGAAGCATTGAGTTTAGAGTGGGAAAGATGA

Protein sequence

MSTSRMMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWER

Homology

[Close]

BLAST of Pay0007400 vs. ExPASy Swiss-Prot
Match: D9J034 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Solanum tuberosum OX=4113 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.1e-60
Identity = 125/244 (51.23%), Postives = 165/244 (67.62%), Query Frame = 0


Query: 6   MMKLTRLF-SRNQLFEQIVCKKDG-YVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGR 65
           M+K++RL   RNQL  +   K  G  V   +  H  +T AG   + QN      K   GR
Sbjct: 1   MLKVSRLLHPRNQLLHK---KLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKRE-GR 60

Query: 66  AFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLF 125
            F  Y V+KGKAA+S EP +PTF +++SG + ++RRG IMLTF P++GERKYDW ++QLF
Sbjct: 61  VFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLF 120

Query: 126 ALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKP 185
           ALSATEVGSLISMG +DS EFFHDP MLSS AGQVRK+L+IK + DG+GY ISL+VVN  
Sbjct: 121 ALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNN 180

Query: 186 QNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFN-PNIGMGNGFQSKRIDREALSL 245
             TND  ++P TT EF+V++TA SFALP ++GWDR  N P+  +       ++  + +  
Sbjct: 181 LKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQ--SPSKVVPQLMEA 238

Query: 246 EWER 247
           EW+R
Sbjct: 241 EWDR 238

[Close]

BLAST of Pay0007400 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-57
Identity = 102/158 (64.56%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 62  GRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQ 121
           GR F  Y ++KGKAA+S+EP +P+FT+++SGNL IDRRGS+M+TF PA+GERKYDW +KQ
Sbjct: 52  GRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 111

Query: 122 LFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVN 181
            FALS TEVGSLISMG KDS EFFHDP M SS AGQVRK+L++K H DG+GY ISL+V N
Sbjct: 112 KFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNN 171

Query: 182 KPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRV 220
               TND+  +P T  EF+V+KTA SFALP ++GW+R+
Sbjct: 172 SILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 209

[Close]

BLAST of Pay0007400 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-43
Identity = 84/184 (45.65%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 63  RAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQL 122
           + FV Y +YKGKAA+++EP  P F+ ++SG   + R G +ML FAPA G R+YDW+RKQ+
Sbjct: 91  KVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQV 150

Query: 123 FALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNK 182
           F+LS TE+GS+IS+G KDSCEFFHDP    S  G+VRK L ++   DG+G+  +L+V NK
Sbjct: 151 FSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNK 210

Query: 183 PQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSL 242
             N ++ + +P T  EF+VL +A +F +P LLGW    N          +    R    L
Sbjct: 211 LINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNANPRSGAEL 270

Query: 243 EWER 247
           EW R
Sbjct: 271 EWNR 274

[Close]

BLAST of Pay0007400 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-39
Identity = 73/155 (47.10%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 62  GRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQ 121
           GR F SY +YKGKAA+S +P  P F  ++SG   + + G ++L FAPA+  R+YDWTRKQ
Sbjct: 84  GRVFTSYSIYKGKAALSFDPRPPLFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQ 143

Query: 122 LFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVN 181
           +F+LS  E+G+L+++GP DSCEFFHDP    S  G+VRK L I+   DGNG   +L+V N
Sbjct: 144 VFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKIEPTPDGNGRFFNLSVQN 203

Query: 182 KPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGW 217
           +  N ++ + +P T GEF+V+ +  ++ +P L+GW
Sbjct: 204 RLINVDESIYIPITKGEFAVIVSTFNYIIPHLMGW 238

[Close]

BLAST of Pay0007400 vs. ExPASy Swiss-Prot
Match: Q66GR6 (Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY3 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.7e-39
Identity = 76/160 (47.50%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 63  RAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQL 122
           R +V + +YKGKAA++IEP  P F  +ESG   + + G ++L FAPA G R+YDW+RKQ+
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143

Query: 123 FALSATEVGSLISMGPKDSCEFFHDPGM-LSSTAGQVRKNLAIKAHTDGNGYMISLNVVN 182
           F+LS TE+G+L+S+GP++SCEFFHDP     S  G+VRK L ++   DG+G   +L+V N
Sbjct: 144 FSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQN 203

Query: 183 KPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFN 222
           K  N ++ + +P T  EF+VL +A +F LP L+GW    N
Sbjct: 204 KLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFAN 243

[Close]

BLAST of Pay0007400 vs. ExPASy TrEMBL
Match: A0A1S3CBJ9 (single-stranded DNA-bindig protein WHY2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103498625 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.6e-140
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MSTSRMMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNA 60
           MSTSRMMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNA
Sbjct: 1   MSTSRMMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNA 60

Query: 61  GGRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRK 120
           GGRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRK
Sbjct: 61  GGRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRK 120

Query: 121 QLFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVV 180
           QLFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVV
Sbjct: 121 QLFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVV 180

Query: 181 NKPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREAL 240
           NKPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREAL
Sbjct: 181 NKPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREAL 240

Query: 241 SLEWER 247
           SLEWER
Sbjct: 241 SLEWER 246

[Close]

BLAST of Pay0007400 vs. ExPASy TrEMBL
Match: A0A0A0KXS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647290 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 210/241 (87.14%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 6   MMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAF 65
           MMKLTRLFSRNQLFEQIV KK GYVGHPLGSHPFS+ AGI + TQNFT TVTKNAGGR F
Sbjct: 1   MMKLTRLFSRNQLFEQIVWKKAGYVGHPLGSHPFSSNAGISDSTQNFTRTVTKNAGGRVF 60

Query: 66  VSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFAL 125
            SYHVYKGKAA+S+EPCMPTFTKVESGN I+DRRGSIMLTFAPA+GERKYDWTRKQLFAL
Sbjct: 61  ASYHVYKGKAALSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQLFAL 120

Query: 126 SATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQN 185
           SATE+GSLIS+GP+DSCEFFHDPGMLSSTAGQVRK+LAIKAHTDGNGY  SLNVVNKPQN
Sbjct: 121 SATEIGSLISLGPRDSCEFFHDPGMLSSTAGQVRKSLAIKAHTDGNGYFFSLNVVNKPQN 180

Query: 186 TNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWE 245
           TND+LS+PFTTGEFSV+KTACSFALPSLLGWDRV NPN+G+G+ FQ K+IDREALSLEWE
Sbjct: 181 TNDYLSVPFTTGEFSVMKTACSFALPSLLGWDRVTNPNLGVGSVFQPKKIDREALSLEWE 240

Query: 246 R 247
           R
Sbjct: 241 R 241

[Close]

BLAST of Pay0007400 vs. ExPASy TrEMBL
Match: A0A6J1DVW8 (single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023988 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.8e-99
Identity = 172/232 (74.14%), Postives = 200/232 (86.21%), Query Frame = 0


Query: 16  NQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAFVSYHVYKGKA 75
           NQLFEQIVCKK G VGHP GSH FS+R GIP+  QNFT TVTKNAG R + SY+VYKGKA
Sbjct: 14  NQLFEQIVCKKSGNVGHPFGSHSFSSRVGIPDSRQNFTQTVTKNAGDRVYASYNVYKGKA 73

Query: 76  AVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFALSATEVGSLIS 135
            VS+ PC+PTFTK++SGNL+I RRGS+MLTF PA+GERKYDWT+KQLF+LSATE+G+LIS
Sbjct: 74  GVSMMPCLPTFTKLDSGNLVISRRGSVMLTFFPAIGERKYDWTKKQLFSLSATEIGTLIS 133

Query: 136 MGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQNTNDFLSLPFT 195
           +GP+DSCEFFHDPGMLSSTAGQVRK+L IK+H DGNGY ISLNVVN  QNT +FLS+PFT
Sbjct: 134 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKSHADGNGYFISLNVVNNMQNTKEFLSVPFT 193

Query: 196 TGEFSVLKTACSFALPSLLGWDRVFNP-NIGMGNGFQSKRIDREALSLEWER 247
            GEFSV+KTACSFALP +LGWD++  P + GMG   Q  ++DREALSLEWER
Sbjct: 194 AGEFSVMKTACSFALPHILGWDQLTRPSHQGMGKVVQPNKVDREALSLEWER 245

[Close]

BLAST of Pay0007400 vs. ExPASy TrEMBL
Match: A0A6J1F1U6 (single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111438891 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.5e-98
Identity = 169/241 (70.12%), Postives = 204/241 (84.65%), Query Frame = 0


Query: 6   MMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAF 65
           M+KL R FSRNQLFEQ+VCKK G+V H  GSHPFS+  GIP   Q FT+TV KN   R +
Sbjct: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTNTVPKNENDRVY 60

Query: 66  VSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFAL 125
            +Y+VYKGKA VS+ PC+PTFTK+ESG+L+IDRRGSI+LTF PA+GERKYDWT+KQ F+L
Sbjct: 61  AAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSL 120

Query: 126 SATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQN 185
           + TEVG+LIS+GP+DSCEFFHDPGMLSSTAGQVRK+L+IKAH DGNGY ISLNVVN  Q+
Sbjct: 121 NPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQS 180

Query: 186 TNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWE 245
           T +FLS+PFT GEFSV+KTACSFALP +LGWDR+  P++GM  GFQ  +++RE LSLEW+
Sbjct: 181 TKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSLEWK 239

Query: 246 R 247
           R
Sbjct: 241 R 239

[Close]

BLAST of Pay0007400 vs. ExPASy TrEMBL
Match: A0A6J1I8L3 (single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471969 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.4e-97
Identity = 167/241 (69.29%), Postives = 201/241 (83.40%), Query Frame = 0


Query: 6   MMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAF 65
           M+KL R  SRNQLFEQ+VCKK  +V H  GSHPFS+  GIP   QNFTHTV KN   R +
Sbjct: 1   MLKLQRWLSRNQLFEQVVCKKAVHVDHAFGSHPFSSGVGIPR--QNFTHTVPKNENDRVY 60

Query: 66  VSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFAL 125
            +Y+VYKGKA VS+ PC+PTFTK++SG+L++DRRGS++LTF PA+GERKYDWT+KQ F+L
Sbjct: 61  AAYNVYKGKAGVSMFPCLPTFTKLKSGSLVVDRRGSVLLTFFPAIGERKYDWTKKQYFSL 120

Query: 126 SATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQN 185
           S TEVG+LIS+GP+DSCEFFHDPGMLSSTAGQVRK+L IKAH DGNGY ISLNVVN  Q+
Sbjct: 121 SPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNTQS 180

Query: 186 TNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWE 245
           T +FLS+PFT GEFSV+KTACSFALP +LGWDR+  P++ M  GFQ  +++RE LSLEWE
Sbjct: 181 TKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLRMEKGFQPNKVNREGLSLEWE 239

Query: 246 R 247
           R
Sbjct: 241 R 239

[Close]

BLAST of Pay0007400 vs. NCBI nr
Match: XP_008459508.1 (PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial [Cucumis melo])

HSP 1 Score: 508.4 bits (1308), Expect = 3.3e-140
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MSTSRMMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNA 60
           MSTSRMMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNA
Sbjct: 1   MSTSRMMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNA 60

Query: 61  GGRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRK 120
           GGRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRK
Sbjct: 61  GGRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRK 120

Query: 121 QLFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVV 180
           QLFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVV
Sbjct: 121 QLFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVV 180

Query: 181 NKPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREAL 240
           NKPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREAL
Sbjct: 181 NKPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREAL 240

Query: 241 SLEWER 247
           SLEWER
Sbjct: 241 SLEWER 246

[Close]

BLAST of Pay0007400 vs. NCBI nr
Match: XP_004141520.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Cucumis sativus] >KGN52606.1 hypothetical protein Csa_009296 [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 7.7e-121
Identity = 210/241 (87.14%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 6   MMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAF 65
           MMKLTRLFSRNQLFEQIV KK GYVGHPLGSHPFS+ AGI + TQNFT TVTKNAGGR F
Sbjct: 1   MMKLTRLFSRNQLFEQIVWKKAGYVGHPLGSHPFSSNAGISDSTQNFTRTVTKNAGGRVF 60

Query: 66  VSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFAL 125
            SYHVYKGKAA+S+EPCMPTFTKVESGN I+DRRGSIMLTFAPA+GERKYDWTRKQLFAL
Sbjct: 61  ASYHVYKGKAALSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQLFAL 120

Query: 126 SATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQN 185
           SATE+GSLIS+GP+DSCEFFHDPGMLSSTAGQVRK+LAIKAHTDGNGY  SLNVVNKPQN
Sbjct: 121 SATEIGSLISLGPRDSCEFFHDPGMLSSTAGQVRKSLAIKAHTDGNGYFFSLNVVNKPQN 180

Query: 186 TNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWE 245
           TND+LS+PFTTGEFSV+KTACSFALPSLLGWDRV NPN+G+G+ FQ K+IDREALSLEWE
Sbjct: 181 TNDYLSVPFTTGEFSVMKTACSFALPSLLGWDRVTNPNLGVGSVFQPKKIDREALSLEWE 240

Query: 246 R 247
           R
Sbjct: 241 R 241

[Close]

BLAST of Pay0007400 vs. NCBI nr
Match: XP_038891064.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Benincasa hispida])

HSP 1 Score: 379.8 bits (974), Expect = 1.8e-101
Identity = 177/241 (73.44%), Postives = 205/241 (85.06%), Query Frame = 0


Query: 6   MMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAF 65
           MMKL R  SRNQLFEQIVCKK G+VGHPLGSHPFS+R GIP+  QNFT TV +NA  R +
Sbjct: 1   MMKLQRWLSRNQLFEQIVCKKAGHVGHPLGSHPFSSRVGIPDSRQNFTRTVGENASDRVY 60

Query: 66  VSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFAL 125
            +Y VYKGKA +S+ PC+PTFTK+ESG L+I RRGSIMLTF PA+GERKYDWT+KQLFAL
Sbjct: 61  AAYSVYKGKAGLSMMPCLPTFTKLESGCLVIGRRGSIMLTFFPAIGERKYDWTKKQLFAL 120

Query: 126 SATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQN 185
           S TEVG+LIS+GP+DSCEFFHDPGMLSS+AGQVRK+L IKAH DGNGY ISLNVVN  +N
Sbjct: 121 SPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSEN 180

Query: 186 TNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWE 245
           T +FLS+PFT GEFSV+KTACSF LP +LGWD++  P+ GMG  FQ  ++DREALSLEWE
Sbjct: 181 TKNFLSVPFTAGEFSVMKTACSFVLPHILGWDQLKKPSPGMGKVFQPNKVDREALSLEWE 240

Query: 246 R 247
           R
Sbjct: 241 R 241

[Close]

BLAST of Pay0007400 vs. NCBI nr
Match: XP_022157229.1 (single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 372.1 bits (954), Expect = 3.7e-99
Identity = 172/232 (74.14%), Postives = 200/232 (86.21%), Query Frame = 0


Query: 16  NQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAFVSYHVYKGKA 75
           NQLFEQIVCKK G VGHP GSH FS+R GIP+  QNFT TVTKNAG R + SY+VYKGKA
Sbjct: 14  NQLFEQIVCKKSGNVGHPFGSHSFSSRVGIPDSRQNFTQTVTKNAGDRVYASYNVYKGKA 73

Query: 76  AVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFALSATEVGSLIS 135
            VS+ PC+PTFTK++SGNL+I RRGS+MLTF PA+GERKYDWT+KQLF+LSATE+G+LIS
Sbjct: 74  GVSMMPCLPTFTKLDSGNLVISRRGSVMLTFFPAIGERKYDWTKKQLFSLSATEIGTLIS 133

Query: 136 MGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQNTNDFLSLPFT 195
           +GP+DSCEFFHDPGMLSSTAGQVRK+L IK+H DGNGY ISLNVVN  QNT +FLS+PFT
Sbjct: 134 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKSHADGNGYFISLNVVNNMQNTKEFLSVPFT 193

Query: 196 TGEFSVLKTACSFALPSLLGWDRVFNP-NIGMGNGFQSKRIDREALSLEWER 247
            GEFSV+KTACSFALP +LGWD++  P + GMG   Q  ++DREALSLEWER
Sbjct: 194 AGEFSVMKTACSFALPHILGWDQLTRPSHQGMGKVVQPNKVDREALSLEWER 245

[Close]

BLAST of Pay0007400 vs. NCBI nr
Match: XP_022932488.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita moschata])

HSP 1 Score: 367.5 bits (942), Expect = 9.2e-98
Identity = 169/241 (70.12%), Postives = 204/241 (84.65%), Query Frame = 0


Query: 6   MMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAF 65
           M+KL R FSRNQLFEQ+VCKK G+V H  GSHPFS+  GIP   Q FT+TV KN   R +
Sbjct: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTNTVPKNENDRVY 60

Query: 66  VSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFAL 125
            +Y+VYKGKA VS+ PC+PTFTK+ESG+L+IDRRGSI+LTF PA+GERKYDWT+KQ F+L
Sbjct: 61  AAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSL 120

Query: 126 SATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQN 185
           + TEVG+LIS+GP+DSCEFFHDPGMLSSTAGQVRK+L+IKAH DGNGY ISLNVVN  Q+
Sbjct: 121 NPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQS 180

Query: 186 TNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWE 245
           T +FLS+PFT GEFSV+KTACSFALP +LGWDR+  P++GM  GFQ  +++RE LSLEW+
Sbjct: 181 TKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSLEWK 239

Query: 246 R 247
           R
Sbjct: 241 R 239

[Close]

BLAST of Pay0007400 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 )

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-58
Identity = 102/158 (64.56%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 62  GRAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQ 121
           GR F  Y ++KGKAA+S+EP +P+FT+++SGNL IDRRGS+M+TF PA+GERKYDW +KQ
Sbjct: 52  GRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 111

Query: 122 LFALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVN 181
            FALS TEVGSLISMG KDS EFFHDP M SS AGQVRK+L++K H DG+GY ISL+V N
Sbjct: 112 KFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNN 171

Query: 182 KPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRV 220
               TND+  +P T  EF+V+KTA SFALP ++GW+R+
Sbjct: 172 SILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 209

[Close]

BLAST of Pay0007400 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-40
Identity = 75/159 (47.17%), Postives = 109/159 (68.55%), Query Frame = 0


Query: 63  RAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQL 122
           R +V + +YKGKAA++IEP  P F  +ESG   + + G ++L FAPA G R+YDW+RKQ+
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143

Query: 123 FALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNK 182
           F+LS TE+G+L+S+GP++SCEFFHDP       G+VRK L ++   DG+G   +L+V NK
Sbjct: 144 FSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNK 203

Query: 183 PQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFN 222
             N ++ + +P T  EF+VL +A +F LP L+GW    N
Sbjct: 204 LLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFAN 242

[Close]

BLAST of Pay0007400 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-40
Identity = 76/160 (47.50%), Postives = 110/160 (68.75%), Query Frame = 0


Query: 63  RAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQL 122
           R +V + +YKGKAA++IEP  P F  +ESG   + + G ++L FAPA G R+YDW+RKQ+
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143

Query: 123 FALSATEVGSLISMGPKDSCEFFHDPGM-LSSTAGQVRKNLAIKAHTDGNGYMISLNVVN 182
           F+LS TE+G+L+S+GP++SCEFFHDP     S  G+VRK L ++   DG+G   +L+V N
Sbjct: 144 FSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQN 203

Query: 183 KPQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFN 222
           K  N ++ + +P T  EF+VL +A +F LP L+GW    N
Sbjct: 204 KLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFAN 243

[Close]

BLAST of Pay0007400 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 161.8 bits (408), Expect = 7.1e-40
Identity = 71/159 (44.65%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 63  RAFVSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQL 122
           R +V + +YKGKAA++++P  P F  ++SG   + + G ++L FAP+ G R+YDW++KQ+
Sbjct: 80  RFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQV 139

Query: 123 FALSATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNK 182
           F+LS TE+G+L+S+GP++SCEFFHDP    S  G+VRK L ++   DG+G+  +L+V NK
Sbjct: 140 FSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNK 199

Query: 183 PQNTNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFN 222
             N ++ + +P T  EF+VL +A +F LP L+GW    N
Sbjct: 200 LVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFAN 238

The following BLAST results are available for this feature:

BLAST of Pay0007400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D9J034	2.1e-60	51.23	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Solanum tuberosum OX=...	[more]
Q8VYF7	2.8e-57	64.56	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9LL85	2.3e-43	45.65	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=...	[more]
B2LXS7	2.6e-39	47.10	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=W...	[more]
Q66GR6	7.7e-39	47.50	Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Pay0007400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBJ9	1.6e-140	100.00	single-stranded DNA-bindig protein WHY2, mitochondrial OS=Cucumis melo OX=3656 G...	[more]
A0A0A0KXS2	3.7e-121	87.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647290 PE=3 SV=1	[more]
A0A6J1DVW8	1.8e-99	74.14	single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 OS=Momordica c...	[more]
A0A6J1F1U6	4.5e-98	70.12	single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A6J1I8L3	8.4e-97	69.29	single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita maxima OX=3...	[more]

BLAST of Pay0007400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459508.1	3.3e-140	100.00	PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial [Cucumis melo]	[more]
XP_004141520.1	7.7e-121	87.14	single-stranded DNA-binding protein WHY2, mitochondrial [Cucumis sativus] >KGN52...	[more]
XP_038891064.1	1.8e-101	73.44	single-stranded DNA-binding protein WHY2, mitochondrial [Benincasa hispida]	[more]
XP_022157229.1	3.7e-99	74.14	single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 [Momordica cha...	[more]
XP_022932488.1	9.2e-98	70.12	single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita moschata]	[more]

BLAST of Pay0007400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71260.1	2.0e-58	64.56	WHIRLY 2	[more]
AT2G02740.2	1.1e-40	47.17	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	5.5e-40	47.50	ssDNA-binding transcriptional regulator	[more]
AT1G14410.1	7.1e-40	44.65	ssDNA-binding transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013742	Whirly transcription factor	PFAM	PF08536	Whirly	coord: 70..204 e-value: 4.3E-53 score: 178.8
IPR013742	Whirly transcription factor	PANTHER	PTHR31745	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 6..246
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 56..228 e-value: 8.6E-68 score: 229.4
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 62..245
None	No IPR available	PANTHER	PTHR31745:SF1	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 6..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007400.1	Pay0007400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006281	DNA repair
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:1990391	DNA repair complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding