Pay0007360 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007360
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr05: 13976232 .. 13980079 (+)
RNA-Seq Expression	Pay0007360
Synteny	Pay0007360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATACGAATGACTGTAGCAAGCAATATTAAGTCCACAATTAAGAACATTGAAGATGCTAAGGAATTTATGAAATCTGTGGAAAAATGTTCTTAGTCAGAGTCGGCTAACAAGTCACTTGCTGCAACACTTATGAGTACTTTAACCAACATCAAGTTTGATGGTTCTCATACTATACATGAGCATATCCTTGAAATGACGAACTTGGCAGCAAGGTTAAAGACCATGGGAATGAAAGTTAATGAGAATTTTTTGGTAACGTTTATCCTTAATTCCTTACCTTCAGATTATGGTACATTTCACATGAACTATAACGCTCTGAAAGATAAATGGAATGTGCATGAATTACAAAGTATGCTCATTCAAAAGGAAGCGAGACTTAAGAAACCAATAATTCACTCTGTCAATCTCATGGGTCATAAAGGAGCTGGAAAGAAACCTGGAAAAAAGAATGGCAAGGGCAATCATGGACAATTAAAGGTAAAACAATCATCTGCCCCAATCCACAAAAAGAGACAAATTAAGGATAAGTGTCGTTTTTGCAACAAACCTGGACACTATCAAAAAGATTGTCTAAAACGTAAGGCATGGTTCGAGAATAAAGGTAAGCATAATGCTTTAGTATGTTTCGAATCAAATTTAACTGAAGTTCCTTATAATACATGGTGGATTGATTCTGGTTGTACCATTCATATTTCCAATACGATGCAGGGATTCCTCACGACCGAACCACAAACCCAAATGAGAGATTCATTTTTATGGGAAACAGAGTCAAAGTTTCAGTTGAAGCTGTGGGAACCTATCATTTAACTTTAGATACTGAACATCATTTAGACCTTTTTGATACTTTTTATGTTCCTTCTATTTCTCGTAATTTGATTTCCTTGTCAAAACTTGATACTTCAGGTTATTACTTCAAATTTAGAAATGAGTGTTTTAGTTTATTCAAACAGAACATTTTTATTGGTTCTGGTATTATTTGTGATGACTTATATAAATTAAAGCTTGATAATGTCGTTGTTGAGAGTTTGTTAACCTTGCATCATAATGTTGGTACTAAACGTGGTCAAACTAATGAATTGTCAGCTTACTTGTGACATAAACGTTTAGGTCACATATCCAAAGAAAGAATTAAAAGATTGATAAAGAATGAAATTCTTCCAGATTTGGATTTTACTGACCTTGGAATTTGTGTGGATTGTATTAAAGGAAAACAAACAAAACACACAGTTAATAAAGAAGCCACAAGAAGCTCACAGCTTCTTGAAATTATACACACTGATATTTGTGGGCCTTTTGATGTCCATCTTTTGGTGGAGAAAAGTATTTTATCACCTTTATTGATGATTTCTCACGTTATGGTTATATCTATTTATTGCATGAGAAATCTCAAGCAATAGATGCCTTAAAAGTATTTATAAATGAAGTTGAAAGGCAATTAGATAGAAAGGTGAAAATCTTAAGATCTGATAGAGGTGGTGAGTATTATGGAAAATATGACGAGAATGGGACAATGCCCCGGTCCATTCGCTAAATTCCTAGAAAGCCATGGCATATGTGCTCAATACACAATGCCAGGAACACCACAACAAAATGGTGTTGCAGAAAGGCGAAATCGTACATTAATGAATATGGTTAGAAGCATGTTAATTAATTCATCTTTACCTGTGTCCTTGTGGATGTATGCATTAAGAACCGCTCAATATTTATTAAACAGGGTTCCTAGTAAGTCAGTTCCAAAGACACCTTTTGAACTGTGGACAGGAAGGAAACCTAGTTTAAGACACCTACATGTTTGGGGTTGTCAAGCGGAAGTAAGAATTTATAATCCACATGAAAAGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGGTATAGATTTTATTGTCCTAACCACAGTACGAGAATAGTTGAAACTGAAAATGTAAGGTTCATTGAGAATGACATAATTAGTGGGAGTTTGGAACCGTGAAAATGGAAATTCAAGAAGTTAGGGTGGAAATTCCTTCATCTATAACTTCTTCTCAAGTTGTTGTTTCTGTAGTTGTTGATTCGGTTAACAATCCACAAGAACAACAATTAATGGTCAAATACCACATAATGATATTGTAGCAAATGAACCTGTAACTGAGGGACCACAAGAAATAGAATTAAGAATATCTGGAAGATCAAGAAGATCAGCTATTTCTGATGACTATTTGATTTATTTGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAGTTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGTTAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAAGTCTGGGATCTTGTAGAATTGCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACCAAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGGCATTGACTACAAAGAGACCTTTTCTCCTGTCTCGAAAAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAGACCACCTTTCTAAATGGAAATTTAGATGAAGTGTTCATGGATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAATATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTATAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATAAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTCTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAAATCAAAAGGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAACTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGTTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGTAAAGAAAGTTTCAAGGTATCTGCAAGGAACGAAAAATTATATGCTTACTTATAAGAGATCTGATCATCTTGAGATGATTGGATATTCAGATTCAGATTTTGCTGGATGTGTAGATACAAGAAAATCCACTTTTGGCTATTTGTTCCTTTTAGCTGAAGGAGCAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGTTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGCGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGCCAAGCCGCTGAGAATTTATTGTGATAATTCTGCAGCAGTTTTCTTCTCAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAAAATACTTTGCTGTTAAAGAAGAAGTTCAGAAACAGAGGGTGTCAATTGAATACATTAGCACTAAACTTATGATTGCGGATCCACTGACTAAAGGATTGCCACCAAAGACGTTCAATGATCACGTTGAACGTAAGGGCATCAGTAGATATCATCATTGA

mRNA sequence

ATGTTTATACGAATGACTGTAGCAAGCAATATTAAGTCCACAATTAAGAACATTGAAGATGCTAAGGAATTTATGAAATCTTCACTTGCTGCAACACTTATGAGTACTTTAACCAACATCAAGTTTGATGGTTCTCATACTATACATGAGCATATCCTTGAAATGACGAACTTGGCAGCAAGGTTAAAGACCATGGGAATGAAAGTTAATGAGAATTTTTTGGTAACGTTTATCCTTAATTCCTTACCTTCAGATTATGGTACATTTCACATGAACTATAACGCTCTGAAAGATAAATGGAATAAACCAATAATTCACTCTGTCAATCTCATGGGTCATAAAGGAGCTGGAAAGAAACCTGGAAAAAAGAATGGCAAGGGCAATCATGGACAATTAAAGGTAAAACAATCATCTGCCCCAATCCACAAAAAGAGACAAATTAAGGATAAGTGTCGTTTTTGCAACAAACCTGGACACTATCAAAAAGATTGTCTAAAACGTAAGGCATGGTTCGAGAATAAAGGTAAGCATAATGCTTTAGTATGTTTCGAATCAAATTTAACTGAAGTTCCTTATAATACATGGTGGATTGATTCTGGTTGTACCATTCATATTTCCAATACGATGCAGGGATTCCTCACGACCGAACCACAAACCCAAATGAGAGATTCATTTTTATGGGAAACAGAGTCAAATATTATGGAAAATATGACGAGAATGGGACAATGCCCCGGTCCATTCGCTAAATTCCTAGAAAGCCATGGCATATGTGCTCAATACACAATGCCAGGAACACCACAACAAAATGGTGTTGCAGAAAGGCGAAATCGTACATTAATGAATATGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGGTATAGATTTTATTGTCCTAACCACAGTACGAGAATAGTTGAAACTGAAAATGTAAGGTTCATTGAGAATGACATAATTAGTGGGAGTTTGGAACCAACAACAATTAATGGTCAAATACCACATAATGATATTGTAGCAAATGAACCTGTAACTGAGGGACCACAAGAAATAGAATTAAGAATATCTGGAAGATCAAGAAGATCAGCTATTTCTGATGACTATTTGATTTATTTGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAGTTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGTTAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAAGTCTGGGATCTTGTAGAATTGCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACCAAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGGCATTGACTACAAAGAGACCTTTTCTCCTGTCTCGAAAAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAGACCACCTTTCTAAATGGAAATTTAGATGAAGTGAAAGGAGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAATATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTATAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATAAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTCTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAAATCAAAAGGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAACTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGTTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGTAAAGAAAGTTTCAAGGTATCTGCAAGGAACGAAAAATTATATGCTTACTTATAAGAGATCTGATCATCTTGAGATGATTGGATATTCAGATTCAGATTTTGCTGGATGTGTAGATACAAGAAAATCCACTTTTGGCTATTTGTTCCTTTTAGCTGAAGGAGCAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGTTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGCGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGCCAAGCCGCTGAGAATTTATTGTGATAATTCTGCAGCAGTTTTCTTCTCAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAAAATACTTTGCTGTTAAAGAAGAAGTTCAGAAACAGAGGGTGTCAATTGAATACATTAGCACTAAACTTATGATTGCGGATCCACTGACTAAAGGATTGCCACCAAAGACGTTCAATGATCACGTTGAACGTAAGGGCATCAGTAGATATCATCATTGA

Coding sequence (CDS)

ATGTTTATACGAATGACTGTAGCAAGCAATATTAAGTCCACAATTAAGAACATTGAAGATGCTAAGGAATTTATGAAATCTTCACTTGCTGCAACACTTATGAGTACTTTAACCAACATCAAGTTTGATGGTTCTCATACTATACATGAGCATATCCTTGAAATGACGAACTTGGCAGCAAGGTTAAAGACCATGGGAATGAAAGTTAATGAGAATTTTTTGGTAACGTTTATCCTTAATTCCTTACCTTCAGATTATGGTACATTTCACATGAACTATAACGCTCTGAAAGATAAATGGAATAAACCAATAATTCACTCTGTCAATCTCATGGGTCATAAAGGAGCTGGAAAGAAACCTGGAAAAAAGAATGGCAAGGGCAATCATGGACAATTAAAGGTAAAACAATCATCTGCCCCAATCCACAAAAAGAGACAAATTAAGGATAAGTGTCGTTTTTGCAACAAACCTGGACACTATCAAAAAGATTGTCTAAAACGTAAGGCATGGTTCGAGAATAAAGGTAAGCATAATGCTTTAGTATGTTTCGAATCAAATTTAACTGAAGTTCCTTATAATACATGGTGGATTGATTCTGGTTGTACCATTCATATTTCCAATACGATGCAGGGATTCCTCACGACCGAACCACAAACCCAAATGAGAGATTCATTTTTATGGGAAACAGAGTCAAATATTATGGAAAATATGACGAGAATGGGACAATGCCCCGGTCCATTCGCTAAATTCCTAGAAAGCCATGGCATATGTGCTCAATACACAATGCCAGGAACACCACAACAAAATGGTGTTGCAGAAAGGCGAAATCGTACATTAATGAATATGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGGTATAGATTTTATTGTCCTAACCACAGTACGAGAATAGTTGAAACTGAAAATGTAAGGTTCATTGAGAATGACATAATTAGTGGGAGTTTGGAACCAACAACAATTAATGGTCAAATACCACATAATGATATTGTAGCAAATGAACCTGTAACTGAGGGACCACAAGAAATAGAATTAAGAATATCTGGAAGATCAAGAAGATCAGCTATTTCTGATGACTATTTGATTTATTTGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAGTTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGTTAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAAGTCTGGGATCTTGTAGAATTGCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACCAAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGGCATTGACTACAAAGAGACCTTTTCTCCTGTCTCGAAAAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAGACCACCTTTCTAAATGGAAATTTAGATGAAGTGAAAGGAGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAATATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTATAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATAAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTCTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAAATCAAAAGGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAACTTATTGTATGCACAAACTTGCACTAGACCAGACATCAGTTTTGTTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGTAAAGAAAGTTTCAAGGTATCTGCAAGGAACGAAAAATTATATGCTTACTTATAAGAGATCTGATCATCTTGAGATGATTGGATATTCAGATTCAGATTTTGCTGGATGTGTAGATACAAGAAAATCCACTTTTGGCTATTTGTTCCTTTTAGCTGAAGGAGCAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGTTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACAGTTCATGGTTTATGGCTGCGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGCCAAGCCGCTGAGAATTTATTGTGATAATTCTGCAGCAGTTTTCTTCTCAAAAAACGACAAGTATTCTAAAGGTGCTAAACATATGGAATTAAAATACTTTGCTGTTAAAGAAGAAGTTCAGAAACAGAGGGTGTCAATTGAATACATTAGCACTAAACTTATGATTGCGGATCCACTGACTAAAGGATTGCCACCAAAGACGTTCAATGATCACGTTGAACGTAAGGGCATCAGTAGATATCATCATTGA

Protein sequence

MFIRMTVASNIKSTIKNIEDAKEFMKSSLAATLMSTLTNIKFDGSHTIHEHILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWNKPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKRQIKDKCRFCNKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGFLTTEPQTQMRDSFLWETESNIMENMTRMGQCPGPFAKFLESHGICAQYTMPGTPQQNGVAERRNRTLMNMKLDSRTTSGFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIENDIISGSLEPTTINGQIPHNDIVANEPVTEGPQEIELRISGRSRRSAISDDYLIYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDEVKGEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLEMIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIVASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIAKPLRIYCDNSAAVFFSKNDKYSKGAKHMELKYFAVKEEVQKQRVSIEYISTKLMIADPLTKGLPPKTFNDHVERKGISRYHH

Homology

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BLAST of Pay0007360 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.2e-122
Identity = 259/664 (39.01%), Postives = 375/664 (56.48%), Query Frame = 0


Query: 283  KLDSRTTSGFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIEND---------------- 342
            KLD ++    FIGY ++  GYR + P    +++ + +V F E++                
Sbjct: 666  KLDDKSIPCIFIGYGDEEFGYRLWDP-VKKKVIRSRDVVFRESEVRTAADMSEKVKNGII 725

Query: 343  -----IISGSLEPTTI---------NGQIPHNDIVANEPVTEGPQEIE-----------L 402
                 I S S  PT+           G+ P   I   E + EG +E+E           L
Sbjct: 726  PNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL 785

Query: 403  RISGRSR---RSAISDDYLIYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKS 462
            R S R R   R   S +Y++        +S D +P S  + +      + + AM+EE++S
Sbjct: 786  RRSERPRVESRRYPSTEYVL--------ISDDREPESLKEVLSHPEKNQLMKAMQEEMES 845

Query: 463  MNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFS 522
            +  N  + LVELPK  + + CKWVFK K+D +  + RYKARLV KG+ QK GID+ E FS
Sbjct: 846  LQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFS 905

Query: 523  PVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLD-----------EVKG-EHMVCKL 582
            PV K  S+R I++L A  DLE+ Q+DVKT FL+G+L+           EV G +HMVCKL
Sbjct: 906  PVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKL 965

Query: 583  KRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLK-ISGSKFIILVLYVDDILLAI 642
             +S+YGLKQA RQWY+KF+  + S  + +   D C+Y K  S + FIIL+LYVDD+L+  
Sbjct: 966  NKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVG 1025

Query: 643  NDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMD 702
             D GL+ + K  LSK+F++KD+G A  ++G++I R+RT   L LSQ+ YI +VLE+F M 
Sbjct: 1026 KDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMK 1085

Query: 703  KCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGML 762
                   P     K S   CP    E+  M  +PY+S VG+L+YA  CTRPDI+  VG++
Sbjct: 1086 NAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVV 1145

Query: 763  GRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLEMIGYSDSDFAGCVDTRKSTFG 822
             R+  NPG +HW+AVK + RYL+GT    L +  SD + + GY+D+D AG +D RKS+ G
Sbjct: 1146 SRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTG 1205

Query: 823  YLFLLAEGAISWKSAKQSIIVASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIAKPLR 882
            YLF  + GAISW+S  Q  +  ST EAE++A  E     +WL+ F+  LG+     K   
Sbjct: 1206 YLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQ---KEYV 1265

Query: 883  IYCDNSAAVFFSKNDKYSKGAKHMELKYFAVKEEVQKQRVSIEYISTKLMIADPLTKGLP 890
            +YCD+ +A+  SKN  Y    KH++++Y  ++E V  + + +  IST    AD LTK +P
Sbjct: 1266 VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVP 1316

HSP 2 Score: 47.8 bits (112), Expect = 7.8e-04
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 247 FAKFLESHGICAQYTMPGTPQQNGVAERRNRTLM 281
           F ++  SHGI  + T+PGTPQ NGVAER NRT++
Sbjct: 560 FEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIV 593

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BLAST of Pay0007360 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 351.7 bits (901), Expect = 2.5e-95
Identity = 199/527 (37.76%), Postives = 300/527 (56.93%), Query Frame = 0


Query: 388  SIDND-PVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTK 447
            +I ND P SF +    D+ + W +A+  EL +   N  W + + P+    V  +WVF  K
Sbjct: 885  TIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVK 944

Query: 448  RDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVK 507
             +  GN  RYKARLVA+G+TQK  IDY+ETF+PV++  S R I++LV  Y+L++HQMDVK
Sbjct: 945  YNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVK 1004

Query: 508  TTFLNGNLDE----------VKGEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN 567
            T FLNG L E                VCKL ++IYGLKQA+R W+  F   +    F  +
Sbjct: 1005 TAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNS 1064

Query: 568  IVDRCIYLKISG--SKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVI 627
             VDRCIY+   G  ++ I ++LYVDD+++A  D   +   K +L + F + D+ E  + I
Sbjct: 1065 SVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFI 1124

Query: 628  GIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERNQ 687
            GI I  +     + LSQ AY+ K+L KF M+ C++   P      + L       L  ++
Sbjct: 1125 GIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYEL-------LNSDE 1184

Query: 688  METIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYM 747
                P  S++G L+Y   CTRPD++  V +L RY S    + W+ +K+V RYL+GT +  
Sbjct: 1185 DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMK 1244

Query: 748  LTYKRSDHLE--MIGYSDSDFAGCVDTRKSTFGYLFLLAE-GAISWKSAKQSIIVASTME 807
            L +K++   E  +IGY DSD+AG    RKST GYLF + +   I W + +Q+ + AS+ E
Sbjct: 1245 LIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE 1304

Query: 808  AEFVACFEATVHGLWLRNFISGLGIVDSIAKPLRIYCDNSAAVFFSKNDKYSKGAKHMEL 867
            AE++A FEA    LWL+  ++ + I   +  P++IY DN   +  + N    K AKH+++
Sbjct: 1305 AEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNPSCHKRAKHIDI 1364

Query: 868  KYFAVKEEVQKQRVSIEYISTKLMIADPLTKGLPPKTFNDHVERKGI 899
            KY   +E+VQ   + +EYI T+  +AD  TK LP   F +  ++ G+
Sbjct: 1365 KYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Pay0007360 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.8e-85
Identity = 187/527 (35.48%), Postives = 285/527 (54.08%), Query Frame = 0


Query: 387  LSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKR-VGCKWVFKT 446
            L+ +++P +  QA+K +   +W +AM  E+ +   N  WDLV  P      VGC+W+F  
Sbjct: 950  LAAESEPRTAIQALKDE---RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTK 1009

Query: 447  KRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDV 506
            K +S+G++ RYKARLVAKGY Q+ G+DY ETFSPV K  S+RI++ +       + Q+DV
Sbjct: 1010 KYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1069

Query: 507  KTTFLNGNL-DEV-----------KGEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGF 566
               FL G L D+V              + VCKL++++YGLKQA R WY++  + + + GF
Sbjct: 1070 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGF 1129

Query: 567  KENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYV 626
              ++ D  +++   G   + +++YVDDIL+  ND  LL  T + LS+ F +KD  E  Y 
Sbjct: 1130 VNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYF 1189

Query: 627  IGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERN 686
            +GIE  R  T   L LSQ+ YI  +L +  M        P     K SL    K      
Sbjct: 1190 LGIEAKRVPTG--LHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTK------ 1249

Query: 687  QMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNY 746
              +   Y  IVG+L Y    TRPDIS+ V  L ++   P  +H +A+K++ RYL GT N+
Sbjct: 1250 LTDPTEYRGIVGSLQYL-AFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNH 1309

Query: 747  MLTYKRSDHLEMIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIVASTMEAE 806
             +  K+ + L +  YSD+D+AG  D   ST GY+  L    ISW S KQ  +V S+ EAE
Sbjct: 1310 GIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAE 1369

Query: 807  FVACFEATVHGLWLRNFISGLGIVDSIAKPLRIYCDNSAAVFFSKNDKYSKGAKHMELKY 866
            + +    +    W+ + ++ LGI   + +P  IYCDN  A +   N  +    KH+ + Y
Sbjct: 1370 YRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDY 1429

Query: 867  FAVKEEVQKQRVSIEYISTKLMIADPLTKGLPPKTFNDHVERKGISR 901
              ++ +VQ   + + ++ST   +AD LTK L    F +   + G++R
Sbjct: 1430 HFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGVTR 1462

[Close]

BLAST of Pay0007360 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.5e-84
Identity = 189/525 (36.00%), Postives = 279/525 (53.14%), Query Frame = 0


Query: 387  LSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKR-VGCKWVFKT 446
            L+ +++P +  QA+K D   +W  AM  E+ +   N  WDLV  P  S   VGC+W+F  
Sbjct: 933  LAANSEPRTAIQAMKDD---RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 992

Query: 447  KRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDV 506
            K +S+G++ RYKARLVAKGY Q+ G+DY ETFSPV K  S+RI++ +       + Q+DV
Sbjct: 993  KFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1052

Query: 507  KTTFLNGNL-DEV-----------KGEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGF 566
               FL G L DEV                VC+L+++IYGLKQA R WY++    + + GF
Sbjct: 1053 NNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGF 1112

Query: 567  KENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYV 626
              +I D  +++   G   I +++YVDDIL+  ND  LL  T + LS+ F +K+  +  Y 
Sbjct: 1113 VNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYF 1172

Query: 627  IGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERN 686
            +GIE    R    L LSQ+ Y   +L +  M        P     K +L    K      
Sbjct: 1173 LGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTK------ 1232

Query: 687  QMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNY 746
              +   Y  IVG+L Y    TRPD+S+ V  L +Y   P  DHW A+K+V RYL GT ++
Sbjct: 1233 LPDPTEYRGIVGSLQYL-AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDH 1292

Query: 747  MLTYKRSDHLEMIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIVASTMEAE 806
             +  K+ + L +  YSD+D+AG  D   ST GY+  L    ISW S KQ  +V S+ EAE
Sbjct: 1293 GIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAE 1352

Query: 807  FVACFEATVHGLWLRNFISGLGIVDSIAKPLRIYCDNSAAVFFSKNDKYSKGAKHMELKY 866
            + +    +    W+ + ++ LGI   ++ P  IYCDN  A +   N  +    KH+ L Y
Sbjct: 1353 YRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDY 1412

Query: 867  FAVKEEVQKQRVSIEYISTKLMIADPLTKGLPPKTFNDHVERKGI 899
              ++ +VQ   + + ++ST   +AD LTK L    F +   + G+
Sbjct: 1413 HFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443

[Close]

BLAST of Pay0007360 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 4.4e-31
Identity = 93/315 (29.52%), Postives = 155/315 (49.21%), Query Frame = 0


Query: 503 MDVKTTFLNGNLDE------------VKGEHMVCKLKRSIYGLKQASRQWYLKFNDTITS 562
           MDV T FLN  +DE             +    V +L   +YGLKQA   W    N+T+  
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 563 FGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEA 622
            GF  +  +  +Y + +    I + +YVDD+L+A     +  + K+ L+K + +KD+G+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 623 SYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMD--KCSSSVVPNQKGDKFSLMQCPKN 682
              +G+ I +  ++G + LS + YI K   + +++  K + + + N K     L +    
Sbjct: 121 DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSK----PLFETTSP 180

Query: 683 ELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQ 742
            L+    +  PY SIVG LL+     RPDIS+ V +L R+   P   H ++ ++V RYL 
Sbjct: 181 HLK----DITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLY 240

Query: 743 GTKNYMLTYKRSDHLEMIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAK-QSIIVA 802
            T++  L Y+    L +  Y D+      D   ST GY+ LLA   ++W S K + +I  
Sbjct: 241 TTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPV 300

[Close]

BLAST of Pay0007360 vs. ExPASy TrEMBL
Match: A0A5D3BWW5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00300 PE=4 SV=1)

HSP 1 Score: 1285.4 bits (3325), Expect = 0.0e+00
Identity = 689/897 (76.81%), Postives = 707/897 (78.82%), Query Frame = 0


Query: 1   MFIRMTVASNIKSTIKNIEDAKEFMKS------------SLAATLMSTLTNIKFDGSHTI 60
           MFIRMTVA+NIK TIKN EDAKEFMKS            SLA TLMSTLTNIKFDGS TI
Sbjct: 85  MFIRMTVANNIKFTIKNTEDAKEFMKSVKKCFQSESADKSLAGTLMSTLTNIKFDGSRTI 144

Query: 61  HEHILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------- 120
           HEHILEMTNLAARLKTMGM+VNENFLVTFILNSLPS+YG FHMNYN LKDKWN       
Sbjct: 145 HEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPSEYGPFHMNYNTLKDKWNVHELQSM 204

Query: 121 ---------KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKRQIKDKCR 180
                    KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKK +IKDKCR
Sbjct: 205 LIQEEARLKKPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKGEIKDKCR 264

Query: 181 FCNKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGF 240
           FCNKPGHYQKDCLKRKAWFENK +                    +D    I         
Sbjct: 265 FCNKPGHYQKDCLKRKAWFENKVERQ------------------LDRNVKI--------- 324

Query: 241 LTTEPQTQMRDSFLWETESNIMENMTRMGQCPGPFAKFLESHGICAQ-----YTMPGTPQ 300
                   +R     E      EN    GQCPGPFAKFLESHGICAQ     YTMPGTPQ
Sbjct: 325 --------LRSDRGGEYYGKYDEN----GQCPGPFAKFLESHGICAQYTMPGYTMPGTPQ 384

Query: 301 QNGVAERR-------------NRTLMN---MKLDSRTTSGFFIGYPEKSKGYRFYCPNHS 360
           QN VAER+                + N    K DSRTTSGFFIGY EKSKGYRFYCPNHS
Sbjct: 385 QNDVAERKPSLRHLYVWGCQAEARIYNPHEKKQDSRTTSGFFIGYSEKSKGYRFYCPNHS 444

Query: 361 TRIVETENVRFIENDIISGSLEP-----------------------------------TT 420
           TRIVET NVRFIENDII+GSLEP                                     
Sbjct: 445 TRIVETGNVRFIENDIINGSLEPRKVEIQEVRVEIPSSITSSQIVVPVVVDSVNNPQEQQ 504

Query: 421 INGQIPHNDIVANEPVTEGPQEIELRISGRSRRSAISDDYLIYLHESEFDLSIDNDPVSF 480
           INGQ PHNDIV NEPVTEGPQEIELR S RSRRSAISDDYL+YLHESEFDLSIDNDPVSF
Sbjct: 505 INGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHESEFDLSIDNDPVSF 564

Query: 481 SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERY 540
           SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPK+SKRVGCKWVFKTKRDSNGNIER 
Sbjct: 565 SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKKSKRVGCKWVFKTKRDSNGNIERC 624

Query: 541 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDE 600
           KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKT FLNGNLDE
Sbjct: 625 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDE 684

Query: 601 -----------VKG-EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 660
                      V+G EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL
Sbjct: 685 EVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 744

Query: 661 KISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTH 720
           KISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFE+KDM EASYVIGIEIFRDRTH
Sbjct: 745 KISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMSEASYVIGIEIFRDRTH 804

Query: 721 GLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIV 780
           GLLGLSQ AYINKVLEKFKM+KCSSSVVP QKGDKFSLMQCPKNELERNQMETI YASIV
Sbjct: 805 GLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKGDKFSLMQCPKNELERNQMETISYASIV 864

Query: 781 GNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLE 802
           G+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA KKV RYLQG K+YMLTYKRSDHLE
Sbjct: 865 GSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGAKDYMLTYKRSDHLE 924

[Close]

BLAST of Pay0007360 vs. ExPASy TrEMBL
Match: A0A5A7UG95 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43055G00040 PE=4 SV=1)

HSP 1 Score: 1282.3 bits (3317), Expect = 0.0e+00
Identity = 688/897 (76.70%), Postives = 706/897 (78.71%), Query Frame = 0


Query: 1   MFIRMTVASNIKSTIKNIEDAKEFMKS------------SLAATLMSTLTNIKFDGSHTI 60
           MFIRMTVA+NIK TIKN EDAKEFMKS            SLA TLMSTLTNIKFDGS TI
Sbjct: 85  MFIRMTVANNIKFTIKNTEDAKEFMKSVKKCFQSESADKSLAGTLMSTLTNIKFDGSRTI 144

Query: 61  HEHILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------- 120
           HEHILEMTNLAARLKTMGM+VNENFLV FILNSLPS+YG FHMNYN LKDKWN       
Sbjct: 145 HEHILEMTNLAARLKTMGMEVNENFLVMFILNSLPSEYGPFHMNYNTLKDKWNVHELQSM 204

Query: 121 ---------KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKRQIKDKCR 180
                    KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKK QIKDKCR
Sbjct: 205 LIQEEARLKKPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKGQIKDKCR 264

Query: 181 FCNKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGF 240
           FCNKPGHYQKDCLKRKAWFENK +                    +D    I         
Sbjct: 265 FCNKPGHYQKDCLKRKAWFENKVERQ------------------LDRNVKI--------- 324

Query: 241 LTTEPQTQMRDSFLWETESNIMENMTRMGQCPGPFAKFLESHGICAQ-----YTMPGTPQ 300
                   +R     E      EN    GQCPGPFAKFLESHGICAQ     YTMPGTPQ
Sbjct: 325 --------LRSDRGGEYYGKYDEN----GQCPGPFAKFLESHGICAQYTMPGYTMPGTPQ 384

Query: 301 QNGVAERR-------------NRTLMN---MKLDSRTTSGFFIGYPEKSKGYRFYCPNHS 360
           QN VAER+                + N    K DSRTTSGFFIGY EKSKGYRFYCPNHS
Sbjct: 385 QNDVAERKPSLRHLYVWGCQAEARIYNPHEKKQDSRTTSGFFIGYSEKSKGYRFYCPNHS 444

Query: 361 TRIVETENVRFIENDIISGSLEP-----------------------------------TT 420
           TRIVET NVRFIENDII+GSLEP                                     
Sbjct: 445 TRIVETGNVRFIENDIINGSLEPRKVEIQEVRVEIPSSITSSQIVVPVVVDSVNNPQEQQ 504

Query: 421 INGQIPHNDIVANEPVTEGPQEIELRISGRSRRSAISDDYLIYLHESEFDLSIDNDPVSF 480
           INGQ PHNDIV NEPVTEGPQEIELR S RSRRSAISDDYL+YLHESEFDLSIDNDPVSF
Sbjct: 505 INGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHESEFDLSIDNDPVSF 564

Query: 481 SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERY 540
           SQAIKG+NSTKWLDAMKEELKSMNDNEVWDLVELPK+SKRVGCKWVFKTKRDSNGNIER 
Sbjct: 565 SQAIKGNNSTKWLDAMKEELKSMNDNEVWDLVELPKKSKRVGCKWVFKTKRDSNGNIERC 624

Query: 541 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDE 600
           KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKT FLNGNLDE
Sbjct: 625 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDE 684

Query: 601 -----------VKG-EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 660
                      V+G EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL
Sbjct: 685 EVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 744

Query: 661 KISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTH 720
           KISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFE+KDM EASYVIGIEIFRDRTH
Sbjct: 745 KISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMSEASYVIGIEIFRDRTH 804

Query: 721 GLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIV 780
           GLLGLSQ AYINKVLEKFKM+KCSSSVVP QKGDKFSLMQCPKNELERNQMETI YASIV
Sbjct: 805 GLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKGDKFSLMQCPKNELERNQMETISYASIV 864

Query: 781 GNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLE 802
           G+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA KKV RYLQG K+YMLTYKRSDHLE
Sbjct: 865 GSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGAKDYMLTYKRSDHLE 924

[Close]

BLAST of Pay0007360 vs. ExPASy TrEMBL
Match: A0A445LQ30 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Glycine soja OX=3848 GN=D0Y65_004205 PE=4 SV=1)

HSP 1 Score: 1203.7 bits (3113), Expect = 0.0e+00
Identity = 679/1272 (53.38%), Postives = 776/1272 (61.01%), Query Frame = 0


Query: 1    MFIRMTVASNIKSTIKNIEDAKEFM----------KSSLAATLMSTLTNIKFDGSHTIHE 60
            MF+RMTVA +IK+ +   + AKEFM            SLA TLMSTLT +KFDGS T+HE
Sbjct: 138  MFMRMTVADSIKTALPKTDSAKEFMGLVGERSQTADKSLAGTLMSTLTTMKFDGSRTMHE 197

Query: 61   HILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWNKPIIHS--- 120
            H++EMTN+AARLKT+GM VNENFLV FILNSLPS+YG F M+YN +KDKWN   +HS   
Sbjct: 198  HVIEMTNIAARLKTLGMAVNENFLVQFILNSLPSEYGPFQMSYNTMKDKWNVHELHSMLV 257

Query: 121  ----------------VNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKRQIKDKC 180
                            V+  G++GAGKK  KK+ KG  G LK+K     I KK    + C
Sbjct: 258  QEETRLKNQGSHSIHYVSHRGNQGAGKKFVKKHDKGK-GPLKIKDGPVQIQKKASKNNNC 317

Query: 181  RFCNKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQG 240
             FC K GH+QKDC KRK+WFE KG+ NALVCFESNLTEVP+NTWWIDSGCT H+SNTMQG
Sbjct: 318  HFCGKSGHFQKDCPKRKSWFEKKGELNALVCFESNLTEVPHNTWWIDSGCTTHVSNTMQG 377

Query: 241  FLTTE---PQTQM----------------------------------------------- 300
            FLT +   P  +                                                
Sbjct: 378  FLTIQTISPNEKFVFMGNRVKAPVEAVGTYRLKLDTGHHLDLLETLYVPSLSRNLVSLSK 437

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 438  LDITGYSFNFGNGCFSLFKYNHLIGTGVLCDGLYKLKLDGLYVETVLTLHHNVGTKRSLV 497

Query: 361  --RDSFLWE-------------------------TESNI--------------------- 420
              R +FLW                          T+ NI                     
Sbjct: 498  NERSAFLWHKRLGHISGERIERLIKNEILPDLDFTDLNICVDCIKGKQTKHTKKGATRST 557

Query: 421  ----------------------------MENMTR-------------------------- 480
                                        +++ +R                          
Sbjct: 558  QLLEIVHTDICGPFDVSSFGRERYFITFIDDYSRYGYVYLLHEKSQAVNALEIYLNEVER 617

Query: 481  -----------------------MGQCPGPFAKFLESHGICAQYTMPGTPQQNGVAERRN 540
                                    GQ P PFAK L+  GICAQYTMPGTPQQNGV+ERRN
Sbjct: 618  QLDRKVKIIRSDRGGEYYRRYDETGQHPSPFAKLLQKRGICAQYTMPGTPQQNGVSERRN 677

Query: 541  RTLMNM------------------------------------------------------ 600
            +TLM+M                                                      
Sbjct: 678  KTLMDMVRSMLINSTLPVSLWMYALKTAMYLLNRVPSKAVPKTPFELWTNRTPSMRHLHV 737

Query: 601  ---------------KLDSRTTSGFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIENDI 660
                           KLD+RT SG+FIGYPEKSKGY FYCPNHSTRIVET N RFIEN  
Sbjct: 738  WGCQAEIRIYNPQERKLDARTISGYFIGYPEKSKGYMFYCPNHSTRIVETGNARFIENGE 797

Query: 661  ISGSLEP-----------------------------TTINGQIPHND--IVANEPVTEGP 720
            ISGS  P                             T  N ++ HND  ++ NEP+ E P
Sbjct: 798  ISGSTVPREVEIKEVRVQVPLAFASSSKVITTSVTATNSNEEVQHNDEPMIHNEPIMEEP 857

Query: 721  QEIELRISGRSRRSAISDDYLIYLHESEFDLSI-DNDPVSFSQAIKGDNSTKWLDAMKEE 780
            QE+ LR S R RR AIS+DY++YLHE+E +LSI DNDPVSFSQAI  DNS KWL+AMKEE
Sbjct: 858  QEVALRKSQRERRPAISNDYVVYLHETETNLSINDNDPVSFSQAISCDNSEKWLNAMKEE 917

Query: 781  LKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKE 840
            + SM  N+VWDLVELPK  KRVG KWVFKTKRDS+GN+ERYKARLVAKG+TQKDGIDYKE
Sbjct: 918  IDSMEHNDVWDLVELPKGCKRVGYKWVFKTKRDSHGNLERYKARLVAKGFTQKDGIDYKE 977

Query: 841  TFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDE-----------VKG-EHMV 896
            TFSPVS+KDS RIIMALVAHYDLELHQMDVKT FLNG+L+E           V+G EHMV
Sbjct: 978  TFSPVSRKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEDVYMDQPMGFSVEGKEHMV 1037

[Close]

BLAST of Pay0007360 vs. ExPASy TrEMBL
Match: A0A438D994 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2481 PE=4 SV=1)

HSP 1 Score: 1124.4 bits (2907), Expect = 0.0e+00
Identity = 607/1093 (55.54%), Postives = 719/1093 (65.78%), Query Frame = 0


Query: 1    MFIRMTVASNIKSTIKNIEDAKEFMKS----------SLAATLMSTLTNIKFDGSHTIHE 60
            MF+RMT+A+NIK+++   E A EF+KS          SLA TLM+ LT +K+DG   I +
Sbjct: 61   MFMRMTIANNIKTSLPQTEFASEFLKSVEERFKRADKSLAGTLMAELTTMKYDGQKGIQQ 120

Query: 61   HILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------KPI 120
            HIL MT  AA+LK +GM ++E+FLV F+LNSLPS +  F ++YN   D+WN      K I
Sbjct: 121  HILNMTEKAAKLKALGMGMDESFLVQFVLNSLPSQFAPFKIHYNTNSDQWNLNELTSKCI 180

Query: 121  IHSVNLM--GHK-------GAGKKPGK-KNGKGNHGQLKVKQSSAPIHKKRQIKDKCRFC 180
               V L   GH        G  KK GK K GK N    K            +    C FC
Sbjct: 181  QEEVRLRQEGHNLAFAVTHGVTKKKGKFKKGK-NFPPKKSGPGEGSQSHDGKFTVSCYFC 240

Query: 181  NKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGFLT 240
             K GH +KDC+KRKAWFE +G + + VC+ESNL EVP NTWWIDSG T H++N MQGFLT
Sbjct: 241  GKKGHVKKDCIKRKAWFEKRGINLSFVCYESNLAEVPSNTWWIDSGATTHVTNLMQGFLT 300

Query: 241  TEPQTQMR--------------------------------------DSFLWETESNIMEN 300
            T    +                                        + F+ E E  + + 
Sbjct: 301  TRKPKESEKFLYMGNRLKVEVVAVDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKK 360

Query: 301  M---------------TRMGQCPGPFAKFLESHGICAQYTMPGTPQQNGVAERRNRTLMN 360
            +                  GQ PGPFAKFLE HGI AQYTMPGTPQQNGVAERRNRTLM 
Sbjct: 361  IKIVKSDRGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLME 420

Query: 361  M----------------------------------------------------------- 420
            M                                                           
Sbjct: 421  MVRSMMSYSSVPISLWGEALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPA 480

Query: 421  ----------KLDSRTTSGFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIENDIISGSL 480
                      KLDSRT SG+FIGYP KSKGYRFYCPNHS RIVET N RF+EN  ISGS 
Sbjct: 481  EARIYNPHEKKLDSRTVSGYFIGYPNKSKGYRFYCPNHSVRIVETGNARFLENGEISGSN 540

Query: 481  EPTTI-----------------------------------NGQIPHNDIVANEPVTEGPQ 540
            EP  +                                   +G +P  +I A E V E PQ
Sbjct: 541  EPRKVDIEEIRVDIPPPFLPQEIIVPQPVQQVEDNEQNNRDGSLPLENI-AIENVVEPPQ 600

Query: 541  EIELRISGRSRRSAISDDYLIYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELK 600
               LR S R RR AI+DDY++YL ES++D+ I  DPVSFSQA++ D+S+KW++AM EELK
Sbjct: 601  PAPLRRSQRERRPAITDDYVVYLQESDYDIGIRKDPVSFSQAMESDDSSKWMEAMNEELK 660

Query: 601  SMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETF 660
            SM  N VWDL+ELP   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TF
Sbjct: 661  SMAHNGVWDLIELPNNCKPVGCKWVFKTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTF 720

Query: 661  SPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGN------LDEVKG------EHMVCK 720
            SPVSKKDSLRIIMALVAH+DLELHQMDVKT FLNGN       + +KG      +H+VCK
Sbjct: 721  SPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNWMKISIWNNLKGSQRKEMKHLVCK 780

Query: 721  LKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAI 780
            LK+SIYGLKQASRQWY+KFN+TITSFGFKENIVD+CIYLK+SGSKFI L+LYVDDILLA 
Sbjct: 781  LKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKVSGSKFIFLILYVDDILLAS 840

Query: 781  NDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMD 840
            +D GLL +TKE+LSKNF + DMGEA+YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M 
Sbjct: 841  SDLGLLRETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQ 900

Query: 841  KCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGML 899
             CSS + P  KGDK S MQCP+N +ER QM+ IPYAS VG+L+YAQTCTRPDISF +GML
Sbjct: 901  SCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAIGML 960

[Close]

BLAST of Pay0007360 vs. ExPASy TrEMBL
Match: A0A438K404 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3380 PE=4 SV=1)

HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 614/1135 (54.10%), Postives = 725/1135 (63.88%), Query Frame = 0


Query: 1    MFIRMTVASNIKSTIKNIEDAKEFMKS----------SLAATLMSTLTNIKFDGSHTIHE 60
            MF+RMT+A+NIK+++   E A EF+KS          SLA TLM+ LT +K+DG   I +
Sbjct: 178  MFMRMTIANNIKTSLPQTEFASEFLKSVEERFKRADKSLAGTLMAELTTMKYDGQKGIQQ 237

Query: 61   HILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------KPI 120
            HIL MT  AA+LK +GM ++E+FLV F+LNSLPS +  F ++YN   D+WN      K I
Sbjct: 238  HILNMTEKAAKLKALGMGMDESFLVQFVLNSLPSQFAPFKIHYNTNSDQWNLNELTSKCI 297

Query: 121  IHSVNLM--GHK-------GAGKKPGK-KNGKGNHGQLKVKQSSAPIHKKRQIKDKCRFC 180
               V L   GH        G  KK GK K GK N    K            +    C FC
Sbjct: 298  QEEVRLRQEGHNLAFAVTHGVTKKKGKFKKGK-NFPPKKSGPGEGSQSHDGKFTVSCYFC 357

Query: 181  NKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGFLT 240
             K GH +KDC+KRKAWFE +G + + VC+ESNL EVP NTWWIDSG T H++N MQGFLT
Sbjct: 358  GKKGHVKKDCIKRKAWFEKRGINLSFVCYESNLAEVPSNTWWIDSGATTHVTNLMQGFLT 417

Query: 241  TEPQTQMRDSFLW-------------------ET-------------------------- 300
            T  + +  + FL+                   ET                          
Sbjct: 418  TR-KPKENEKFLYMGNRLKVEVVAVGTYRLLLETGHRMDLLNTFYVASISRNLVSLSKLD 477

Query: 301  -----------ESNIMENMTRMG------------------------------------- 360
                       + ++M N   +G                                     
Sbjct: 478  ATGYSVLFSSGQLSLMLNSVTVGSGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEIYDE 537

Query: 361  --QCPGPFAKFLESHGICAQYTMPGTPQQNGVAERRNRTLMNM----------------- 420
              Q PGPFAKFLE HGI AQYTMPGTPQQNGVAERRNRTLM M                 
Sbjct: 538  SRQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGE 597

Query: 421  ----------------------------------------------------KLDSRTTS 480
                                                                KLDSRT S
Sbjct: 598  ALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVS 657

Query: 481  GFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIENDIISGSLEPTTI------------- 540
            G+FIGYP+KSKGYRFYCPNHS RIVET N RF+EN  ISGS EP  +             
Sbjct: 658  GYFIGYPDKSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPPF 717

Query: 541  ----------------------NGQIPHNDIVANEPVTEGPQEIELRISGRSRRSAISDD 600
                                  +G +P  +I A E   E PQ   LR S R RR AI+DD
Sbjct: 718  LPQEIIVPQPVQQVEDNEQNNRDGSLPLENI-AIENAVEPPQPAPLRRSQRERRPAITDD 777

Query: 601  YLIYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESK 660
            Y++YL ES+FD+ I  DPVSFSQA++ D+S+KW++AM EELKSM  N VWDL+ELP   K
Sbjct: 778  YVVYLQESDFDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCK 837

Query: 661  RVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAH 720
             V CKWVFKTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TFSPVSKKDSLRIIMALVAH
Sbjct: 838  PVSCKWVFKTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAH 897

Query: 721  YDLELHQMDVKTTFLNGNLDE-----------VKG-EHMVCKLKRSIYGLKQASRQWYLK 780
            +DLELHQMDVKT FLNGNLDE            KG EH+VCKLK+SIYGLKQASRQWY+K
Sbjct: 898  FDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIK 957

Query: 781  FNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFE 840
            FN+TITSFGFKENIVD+CIYLK+SGSKFI L+LYVDDILLA +D GLL +TKE+LSKNF 
Sbjct: 958  FNNTITSFGFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFH 1017

Query: 841  IKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLM 899
            + DMGEA+YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  CSS + P  KGDK S M
Sbjct: 1018 MVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKM 1077

[Close]

BLAST of Pay0007360 vs. NCBI nr
Match: TYK04201.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1285.4 bits (3325), Expect = 0.0e+00
Identity = 689/897 (76.81%), Postives = 707/897 (78.82%), Query Frame = 0


Query: 1   MFIRMTVASNIKSTIKNIEDAKEFMKS------------SLAATLMSTLTNIKFDGSHTI 60
           MFIRMTVA+NIK TIKN EDAKEFMKS            SLA TLMSTLTNIKFDGS TI
Sbjct: 85  MFIRMTVANNIKFTIKNTEDAKEFMKSVKKCFQSESADKSLAGTLMSTLTNIKFDGSRTI 144

Query: 61  HEHILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------- 120
           HEHILEMTNLAARLKTMGM+VNENFLVTFILNSLPS+YG FHMNYN LKDKWN       
Sbjct: 145 HEHILEMTNLAARLKTMGMEVNENFLVTFILNSLPSEYGPFHMNYNTLKDKWNVHELQSM 204

Query: 121 ---------KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKRQIKDKCR 180
                    KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKK +IKDKCR
Sbjct: 205 LIQEEARLKKPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKGEIKDKCR 264

Query: 181 FCNKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGF 240
           FCNKPGHYQKDCLKRKAWFENK +                    +D    I         
Sbjct: 265 FCNKPGHYQKDCLKRKAWFENKVERQ------------------LDRNVKI--------- 324

Query: 241 LTTEPQTQMRDSFLWETESNIMENMTRMGQCPGPFAKFLESHGICAQ-----YTMPGTPQ 300
                   +R     E      EN    GQCPGPFAKFLESHGICAQ     YTMPGTPQ
Sbjct: 325 --------LRSDRGGEYYGKYDEN----GQCPGPFAKFLESHGICAQYTMPGYTMPGTPQ 384

Query: 301 QNGVAERR-------------NRTLMN---MKLDSRTTSGFFIGYPEKSKGYRFYCPNHS 360
           QN VAER+                + N    K DSRTTSGFFIGY EKSKGYRFYCPNHS
Sbjct: 385 QNDVAERKPSLRHLYVWGCQAEARIYNPHEKKQDSRTTSGFFIGYSEKSKGYRFYCPNHS 444

Query: 361 TRIVETENVRFIENDIISGSLEP-----------------------------------TT 420
           TRIVET NVRFIENDII+GSLEP                                     
Sbjct: 445 TRIVETGNVRFIENDIINGSLEPRKVEIQEVRVEIPSSITSSQIVVPVVVDSVNNPQEQQ 504

Query: 421 INGQIPHNDIVANEPVTEGPQEIELRISGRSRRSAISDDYLIYLHESEFDLSIDNDPVSF 480
           INGQ PHNDIV NEPVTEGPQEIELR S RSRRSAISDDYL+YLHESEFDLSIDNDPVSF
Sbjct: 505 INGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHESEFDLSIDNDPVSF 564

Query: 481 SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERY 540
           SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPK+SKRVGCKWVFKTKRDSNGNIER 
Sbjct: 565 SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKKSKRVGCKWVFKTKRDSNGNIERC 624

Query: 541 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDE 600
           KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKT FLNGNLDE
Sbjct: 625 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDE 684

Query: 601 -----------VKG-EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 660
                      V+G EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL
Sbjct: 685 EVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 744

Query: 661 KISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTH 720
           KISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFE+KDM EASYVIGIEIFRDRTH
Sbjct: 745 KISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMSEASYVIGIEIFRDRTH 804

Query: 721 GLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIV 780
           GLLGLSQ AYINKVLEKFKM+KCSSSVVP QKGDKFSLMQCPKNELERNQMETI YASIV
Sbjct: 805 GLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKGDKFSLMQCPKNELERNQMETISYASIV 864

Query: 781 GNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLE 802
           G+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA KKV RYLQG K+YMLTYKRSDHLE
Sbjct: 865 GSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGAKDYMLTYKRSDHLE 924

[Close]

BLAST of Pay0007360 vs. NCBI nr
Match: KAA0052755.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1282.3 bits (3317), Expect = 0.0e+00
Identity = 688/897 (76.70%), Postives = 706/897 (78.71%), Query Frame = 0


Query: 1   MFIRMTVASNIKSTIKNIEDAKEFMKS------------SLAATLMSTLTNIKFDGSHTI 60
           MFIRMTVA+NIK TIKN EDAKEFMKS            SLA TLMSTLTNIKFDGS TI
Sbjct: 85  MFIRMTVANNIKFTIKNTEDAKEFMKSVKKCFQSESADKSLAGTLMSTLTNIKFDGSRTI 144

Query: 61  HEHILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------- 120
           HEHILEMTNLAARLKTMGM+VNENFLV FILNSLPS+YG FHMNYN LKDKWN       
Sbjct: 145 HEHILEMTNLAARLKTMGMEVNENFLVMFILNSLPSEYGPFHMNYNTLKDKWNVHELQSM 204

Query: 121 ---------KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKRQIKDKCR 180
                    KPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKK QIKDKCR
Sbjct: 205 LIQEEARLKKPIIHSVNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKGQIKDKCR 264

Query: 181 FCNKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGF 240
           FCNKPGHYQKDCLKRKAWFENK +                    +D    I         
Sbjct: 265 FCNKPGHYQKDCLKRKAWFENKVERQ------------------LDRNVKI--------- 324

Query: 241 LTTEPQTQMRDSFLWETESNIMENMTRMGQCPGPFAKFLESHGICAQ-----YTMPGTPQ 300
                   +R     E      EN    GQCPGPFAKFLESHGICAQ     YTMPGTPQ
Sbjct: 325 --------LRSDRGGEYYGKYDEN----GQCPGPFAKFLESHGICAQYTMPGYTMPGTPQ 384

Query: 301 QNGVAERR-------------NRTLMN---MKLDSRTTSGFFIGYPEKSKGYRFYCPNHS 360
           QN VAER+                + N    K DSRTTSGFFIGY EKSKGYRFYCPNHS
Sbjct: 385 QNDVAERKPSLRHLYVWGCQAEARIYNPHEKKQDSRTTSGFFIGYSEKSKGYRFYCPNHS 444

Query: 361 TRIVETENVRFIENDIISGSLEP-----------------------------------TT 420
           TRIVET NVRFIENDII+GSLEP                                     
Sbjct: 445 TRIVETGNVRFIENDIINGSLEPRKVEIQEVRVEIPSSITSSQIVVPVVVDSVNNPQEQQ 504

Query: 421 INGQIPHNDIVANEPVTEGPQEIELRISGRSRRSAISDDYLIYLHESEFDLSIDNDPVSF 480
           INGQ PHNDIV NEPVTEGPQEIELR S RSRRSAISDDYL+YLHESEFDLSIDNDPVSF
Sbjct: 505 INGQTPHNDIVTNEPVTEGPQEIELRRSVRSRRSAISDDYLVYLHESEFDLSIDNDPVSF 564

Query: 481 SQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERY 540
           SQAIKG+NSTKWLDAMKEELKSMNDNEVWDLVELPK+SKRVGCKWVFKTKRDSNGNIER 
Sbjct: 565 SQAIKGNNSTKWLDAMKEELKSMNDNEVWDLVELPKKSKRVGCKWVFKTKRDSNGNIERC 624

Query: 541 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDE 600
           KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKT FLNGNLDE
Sbjct: 625 KARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDE 684

Query: 601 -----------VKG-EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 660
                      V+G EHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL
Sbjct: 685 EVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYL 744

Query: 661 KISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTH 720
           KISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFE+KDM EASYVIGIEIFRDRTH
Sbjct: 745 KISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMSEASYVIGIEIFRDRTH 804

Query: 721 GLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIV 780
           GLLGLSQ AYINKVLEKFKM+KCSSSVVP QKGDKFSLMQCPKNELERNQMETI YASIV
Sbjct: 805 GLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKGDKFSLMQCPKNELERNQMETISYASIV 864

Query: 781 GNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLE 802
           G+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA KKV RYLQG K+YMLTYKRSDHLE
Sbjct: 865 GSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGAKDYMLTYKRSDHLE 924

[Close]

BLAST of Pay0007360 vs. NCBI nr
Match: RZC25410.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja])

HSP 1 Score: 1203.7 bits (3113), Expect = 0.0e+00
Identity = 679/1272 (53.38%), Postives = 776/1272 (61.01%), Query Frame = 0


Query: 1    MFIRMTVASNIKSTIKNIEDAKEFM----------KSSLAATLMSTLTNIKFDGSHTIHE 60
            MF+RMTVA +IK+ +   + AKEFM            SLA TLMSTLT +KFDGS T+HE
Sbjct: 138  MFMRMTVADSIKTALPKTDSAKEFMGLVGERSQTADKSLAGTLMSTLTTMKFDGSRTMHE 197

Query: 61   HILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWNKPIIHS--- 120
            H++EMTN+AARLKT+GM VNENFLV FILNSLPS+YG F M+YN +KDKWN   +HS   
Sbjct: 198  HVIEMTNIAARLKTLGMAVNENFLVQFILNSLPSEYGPFQMSYNTMKDKWNVHELHSMLV 257

Query: 121  ----------------VNLMGHKGAGKKPGKKNGKGNHGQLKVKQSSAPIHKKRQIKDKC 180
                            V+  G++GAGKK  KK+ KG  G LK+K     I KK    + C
Sbjct: 258  QEETRLKNQGSHSIHYVSHRGNQGAGKKFVKKHDKGK-GPLKIKDGPVQIQKKASKNNNC 317

Query: 181  RFCNKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQG 240
             FC K GH+QKDC KRK+WFE KG+ NALVCFESNLTEVP+NTWWIDSGCT H+SNTMQG
Sbjct: 318  HFCGKSGHFQKDCPKRKSWFEKKGELNALVCFESNLTEVPHNTWWIDSGCTTHVSNTMQG 377

Query: 241  FLTTE---PQTQM----------------------------------------------- 300
            FLT +   P  +                                                
Sbjct: 378  FLTIQTISPNEKFVFMGNRVKAPVEAVGTYRLKLDTGHHLDLLETLYVPSLSRNLVSLSK 437

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 438  LDITGYSFNFGNGCFSLFKYNHLIGTGVLCDGLYKLKLDGLYVETVLTLHHNVGTKRSLV 497

Query: 361  --RDSFLWE-------------------------TESNI--------------------- 420
              R +FLW                          T+ NI                     
Sbjct: 498  NERSAFLWHKRLGHISGERIERLIKNEILPDLDFTDLNICVDCIKGKQTKHTKKGATRST 557

Query: 421  ----------------------------MENMTR-------------------------- 480
                                        +++ +R                          
Sbjct: 558  QLLEIVHTDICGPFDVSSFGRERYFITFIDDYSRYGYVYLLHEKSQAVNALEIYLNEVER 617

Query: 481  -----------------------MGQCPGPFAKFLESHGICAQYTMPGTPQQNGVAERRN 540
                                    GQ P PFAK L+  GICAQYTMPGTPQQNGV+ERRN
Sbjct: 618  QLDRKVKIIRSDRGGEYYRRYDETGQHPSPFAKLLQKRGICAQYTMPGTPQQNGVSERRN 677

Query: 541  RTLMNM------------------------------------------------------ 600
            +TLM+M                                                      
Sbjct: 678  KTLMDMVRSMLINSTLPVSLWMYALKTAMYLLNRVPSKAVPKTPFELWTNRTPSMRHLHV 737

Query: 601  ---------------KLDSRTTSGFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIENDI 660
                           KLD+RT SG+FIGYPEKSKGY FYCPNHSTRIVET N RFIEN  
Sbjct: 738  WGCQAEIRIYNPQERKLDARTISGYFIGYPEKSKGYMFYCPNHSTRIVETGNARFIENGE 797

Query: 661  ISGSLEP-----------------------------TTINGQIPHND--IVANEPVTEGP 720
            ISGS  P                             T  N ++ HND  ++ NEP+ E P
Sbjct: 798  ISGSTVPREVEIKEVRVQVPLAFASSSKVITTSVTATNSNEEVQHNDEPMIHNEPIMEEP 857

Query: 721  QEIELRISGRSRRSAISDDYLIYLHESEFDLSI-DNDPVSFSQAIKGDNSTKWLDAMKEE 780
            QE+ LR S R RR AIS+DY++YLHE+E +LSI DNDPVSFSQAI  DNS KWL+AMKEE
Sbjct: 858  QEVALRKSQRERRPAISNDYVVYLHETETNLSINDNDPVSFSQAISCDNSEKWLNAMKEE 917

Query: 781  LKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKE 840
            + SM  N+VWDLVELPK  KRVG KWVFKTKRDS+GN+ERYKARLVAKG+TQKDGIDYKE
Sbjct: 918  IDSMEHNDVWDLVELPKGCKRVGYKWVFKTKRDSHGNLERYKARLVAKGFTQKDGIDYKE 977

Query: 841  TFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDE-----------VKG-EHMV 896
            TFSPVS+KDS RIIMALVAHYDLELHQMDVKT FLNG+L+E           V+G EHMV
Sbjct: 978  TFSPVSRKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEDVYMDQPMGFSVEGKEHMV 1037

[Close]

BLAST of Pay0007360 vs. NCBI nr
Match: RVW32004.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1124.4 bits (2907), Expect = 0.0e+00
Identity = 607/1093 (55.54%), Postives = 719/1093 (65.78%), Query Frame = 0


Query: 1    MFIRMTVASNIKSTIKNIEDAKEFMKS----------SLAATLMSTLTNIKFDGSHTIHE 60
            MF+RMT+A+NIK+++   E A EF+KS          SLA TLM+ LT +K+DG   I +
Sbjct: 61   MFMRMTIANNIKTSLPQTEFASEFLKSVEERFKRADKSLAGTLMAELTTMKYDGQKGIQQ 120

Query: 61   HILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------KPI 120
            HIL MT  AA+LK +GM ++E+FLV F+LNSLPS +  F ++YN   D+WN      K I
Sbjct: 121  HILNMTEKAAKLKALGMGMDESFLVQFVLNSLPSQFAPFKIHYNTNSDQWNLNELTSKCI 180

Query: 121  IHSVNLM--GHK-------GAGKKPGK-KNGKGNHGQLKVKQSSAPIHKKRQIKDKCRFC 180
               V L   GH        G  KK GK K GK N    K            +    C FC
Sbjct: 181  QEEVRLRQEGHNLAFAVTHGVTKKKGKFKKGK-NFPPKKSGPGEGSQSHDGKFTVSCYFC 240

Query: 181  NKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGFLT 240
             K GH +KDC+KRKAWFE +G + + VC+ESNL EVP NTWWIDSG T H++N MQGFLT
Sbjct: 241  GKKGHVKKDCIKRKAWFEKRGINLSFVCYESNLAEVPSNTWWIDSGATTHVTNLMQGFLT 300

Query: 241  TEPQTQMR--------------------------------------DSFLWETESNIMEN 300
            T    +                                        + F+ E E  + + 
Sbjct: 301  TRKPKESEKFLYMGNRLKVEVVAVDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKK 360

Query: 301  M---------------TRMGQCPGPFAKFLESHGICAQYTMPGTPQQNGVAERRNRTLMN 360
            +                  GQ PGPFAKFLE HGI AQYTMPGTPQQNGVAERRNRTLM 
Sbjct: 361  IKIVKSDRGGEYYGRYDESGQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLME 420

Query: 361  M----------------------------------------------------------- 420
            M                                                           
Sbjct: 421  MVRSMMSYSSVPISLWGEALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPA 480

Query: 421  ----------KLDSRTTSGFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIENDIISGSL 480
                      KLDSRT SG+FIGYP KSKGYRFYCPNHS RIVET N RF+EN  ISGS 
Sbjct: 481  EARIYNPHEKKLDSRTVSGYFIGYPNKSKGYRFYCPNHSVRIVETGNARFLENGEISGSN 540

Query: 481  EPTTI-----------------------------------NGQIPHNDIVANEPVTEGPQ 540
            EP  +                                   +G +P  +I A E V E PQ
Sbjct: 541  EPRKVDIEEIRVDIPPPFLPQEIIVPQPVQQVEDNEQNNRDGSLPLENI-AIENVVEPPQ 600

Query: 541  EIELRISGRSRRSAISDDYLIYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELK 600
               LR S R RR AI+DDY++YL ES++D+ I  DPVSFSQA++ D+S+KW++AM EELK
Sbjct: 601  PAPLRRSQRERRPAITDDYVVYLQESDYDIGIRKDPVSFSQAMESDDSSKWMEAMNEELK 660

Query: 601  SMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETF 660
            SM  N VWDL+ELP   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TF
Sbjct: 661  SMAHNGVWDLIELPNNCKPVGCKWVFKTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTF 720

Query: 661  SPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGN------LDEVKG------EHMVCK 720
            SPVSKKDSLRIIMALVAH+DLELHQMDVKT FLNGN       + +KG      +H+VCK
Sbjct: 721  SPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNWMKISIWNNLKGSQRKEMKHLVCK 780

Query: 721  LKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAI 780
            LK+SIYGLKQASRQWY+KFN+TITSFGFKENIVD+CIYLK+SGSKFI L+LYVDDILLA 
Sbjct: 781  LKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKVSGSKFIFLILYVDDILLAS 840

Query: 781  NDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMD 840
            +D GLL +TKE+LSKNF + DMGEA+YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M 
Sbjct: 841  SDLGLLRETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQ 900

Query: 841  KCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGML 899
             CSS + P  KGDK S MQCP+N +ER QM+ IPYAS VG+L+YAQTCTRPDISF +GML
Sbjct: 901  SCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAIGML 960

[Close]

BLAST of Pay0007360 vs. NCBI nr
Match: RVX15925.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 614/1135 (54.10%), Postives = 725/1135 (63.88%), Query Frame = 0


Query: 1    MFIRMTVASNIKSTIKNIEDAKEFMKS----------SLAATLMSTLTNIKFDGSHTIHE 60
            MF+RMT+A+NIK+++   E A EF+KS          SLA TLM+ LT +K+DG   I +
Sbjct: 178  MFMRMTIANNIKTSLPQTEFASEFLKSVEERFKRADKSLAGTLMAELTTMKYDGQKGIQQ 237

Query: 61   HILEMTNLAARLKTMGMKVNENFLVTFILNSLPSDYGTFHMNYNALKDKWN------KPI 120
            HIL MT  AA+LK +GM ++E+FLV F+LNSLPS +  F ++YN   D+WN      K I
Sbjct: 238  HILNMTEKAAKLKALGMGMDESFLVQFVLNSLPSQFAPFKIHYNTNSDQWNLNELTSKCI 297

Query: 121  IHSVNLM--GHK-------GAGKKPGK-KNGKGNHGQLKVKQSSAPIHKKRQIKDKCRFC 180
               V L   GH        G  KK GK K GK N    K            +    C FC
Sbjct: 298  QEEVRLRQEGHNLAFAVTHGVTKKKGKFKKGK-NFPPKKSGPGEGSQSHDGKFTVSCYFC 357

Query: 181  NKPGHYQKDCLKRKAWFENKGKHNALVCFESNLTEVPYNTWWIDSGCTIHISNTMQGFLT 240
             K GH +KDC+KRKAWFE +G + + VC+ESNL EVP NTWWIDSG T H++N MQGFLT
Sbjct: 358  GKKGHVKKDCIKRKAWFEKRGINLSFVCYESNLAEVPSNTWWIDSGATTHVTNLMQGFLT 417

Query: 241  TEPQTQMRDSFLW-------------------ET-------------------------- 300
            T  + +  + FL+                   ET                          
Sbjct: 418  TR-KPKENEKFLYMGNRLKVEVVAVGTYRLLLETGHRMDLLNTFYVASISRNLVSLSKLD 477

Query: 301  -----------ESNIMENMTRMG------------------------------------- 360
                       + ++M N   +G                                     
Sbjct: 478  ATGYSVLFSSGQLSLMLNSVTVGSGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEIYDE 537

Query: 361  --QCPGPFAKFLESHGICAQYTMPGTPQQNGVAERRNRTLMNM----------------- 420
              Q PGPFAKFLE HGI AQYTMPGTPQQNGVAERRNRTLM M                 
Sbjct: 538  SRQNPGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGE 597

Query: 421  ----------------------------------------------------KLDSRTTS 480
                                                                KLDSRT S
Sbjct: 598  ALKTAMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPAEARIYNPHEKKLDSRTVS 657

Query: 481  GFFIGYPEKSKGYRFYCPNHSTRIVETENVRFIENDIISGSLEPTTI------------- 540
            G+FIGYP+KSKGYRFYCPNHS RIVET N RF+EN  ISGS EP  +             
Sbjct: 658  GYFIGYPDKSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPPF 717

Query: 541  ----------------------NGQIPHNDIVANEPVTEGPQEIELRISGRSRRSAISDD 600
                                  +G +P  +I A E   E PQ   LR S R RR AI+DD
Sbjct: 718  LPQEIIVPQPVQQVEDNEQNNRDGSLPLENI-AIENAVEPPQPAPLRRSQRERRPAITDD 777

Query: 601  YLIYLHESEFDLSIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESK 660
            Y++YL ES+FD+ I  DPVSFSQA++ D+S+KW++AM EELKSM  N VWDL+ELP   K
Sbjct: 778  YVVYLQESDFDIGIRKDPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCK 837

Query: 661  RVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIMALVAH 720
             V CKWVFKTKRD+ GNIER+KARLVAKG+TQK+GIDYK+TFSPVSKKDSLRIIMALVAH
Sbjct: 838  PVSCKWVFKTKRDAKGNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAH 897

Query: 721  YDLELHQMDVKTTFLNGNLDE-----------VKG-EHMVCKLKRSIYGLKQASRQWYLK 780
            +DLELHQMDVKT FLNGNLDE            KG EH+VCKLK+SIYGLKQASRQWY+K
Sbjct: 898  FDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIK 957

Query: 781  FNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFE 840
            FN+TITSFGFKENIVD+CIYLK+SGSKFI L+LYVDDILLA +D GLL +TKE+LSKNF 
Sbjct: 958  FNNTITSFGFKENIVDQCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFH 1017

Query: 841  IKDMGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPNQKGDKFSLM 899
            + DMGEA+YVIGIEIFRDR+ G+LGLSQK YI++VLE+F M  CSS + P  KGDK S M
Sbjct: 1018 MVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKM 1077

[Close]

BLAST of Pay0007360 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 329.7 bits (844), Expect = 7.3e-90
Identity = 179/467 (38.33%), Postives = 271/467 (58.03%), Query Frame = 0


Query: 408 WLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQ 467
           W  AM +E+ +M     W++  LP   K +GCKWV+K K +S+G IERYKARLVAKGYTQ
Sbjct: 98  WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157

Query: 468 KDGIDYKETFSPVSKKDSLRIIMALVAHYDLELHQMDVKTTFLNGNLDEV---------- 527
           ++GID+ ETFSPV K  S+++I+A+ A Y+  LHQ+D+   FLNG+LDE           
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217

Query: 528 --KGEHM----VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKF 587
             +G+ +    VC LK+SIYGLKQASRQW+LKF+ T+  FGF ++  D   +LKI+ + F
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277

Query: 588 IILVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTHGLLGLSQ 647
           + +++YVDDI++  N+   + + K  L   F+++D+G   Y +G+EI R      + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQ 337

Query: 648 KAYINKVLEKFKMDKCSSSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQ 707
           + Y   +L++  +  C  S VP      FS           + ++   Y  ++G L+Y Q
Sbjct: 338 RKYALDLLDETGLLGCKPSSVPMDPSVTFSA------HSGGDFVDAKAYRRLIGRLMYLQ 397

Query: 708 TCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLEMIGYSDS 767
             TR DISF V  L ++   P + H +AV K+  Y++GT    L Y     +++  +SD+
Sbjct: 398 -ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 457

Query: 768 DFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIVASTMEAEFVACFEATVHGLWLRNFI 827
            F  C DTR+ST GY   L    ISWKS KQ ++  S+ EAE+ A   AT   +WL  F 
Sbjct: 458 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 517

Query: 828 SGLGIVDSIAKPLRIYCDNSAAVFFSKNDKYSKGAKHMELKYFAVKE 859
             L +   ++KP  ++CDN+AA+  + N  + +  KH+E    +V+E
Sbjct: 518 RELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Pay0007360 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-24
Identity = 78/226 (34.51%), Postives = 116/226 (51.33%), Query Frame = 0


Query: 574 LVLYVDDILLAINDFGLLCQTKEFLSKNFEIKDMGEASYVIGIEIFRDRTH-GLLGLSQK 633
           L+LYVDDILL  +   LL      LS  F +KD+G   Y +GI+I   +TH   L LSQ 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI---KTHPSGLFLSQT 62

Query: 634 AYINKVLEKFKMDKCS--SSVVPNQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYA 693
            Y  ++L    M  C   S+ +P +     S  + P         +   + SIVG L Y 
Sbjct: 63  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP---------DPSDFRSIVGALQYL 122

Query: 694 QTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLEMIGYSD 753
            T TRPDIS+ V ++ +    P +  +  +K+V RY++GT  + L   ++  L +  + D
Sbjct: 123 -TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 182

Query: 754 SDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIVASTMEAEFVA 797
           SD+AGC  TR+ST G+   L    ISW + +Q  +  S+ E E+ A
Sbjct: 183 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

[Close]

BLAST of Pay0007360 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-17
Identity = 46/103 (44.66%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 388 SIDNDPVSFSQAIKGDNSTKWLDAMKEELKSMNDNEVWDLVELPKESKRVGCKWVFKTKR 447
           +I  +P S   A+K      W  AM+EEL +++ N+ W LV  P     +GCKWVFKTK 
Sbjct: 23  TIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKL 82

Query: 448 DSNGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIIM 491
            S+G ++R KARLVAKG+ Q++GI + ET+SPV +  ++R I+
Sbjct: 83  HSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122

[Close]

BLAST of Pay0007360 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-09
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 692 TCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKNYMLTYKRSDHLEMIGYSDS 751
           T TRPD++F V  L ++ S       +AV KV  Y++GT    L Y  +  L++  ++DS
Sbjct: 4   TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADS 63

Query: 752 DFAGCVDTRKSTFGYLFLL 771
           D+A C DTR+S  G+  L+
Sbjct: 64  DWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Pay0007360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.2e-122	39.01	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.5e-95	37.76	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.8e-85	35.48	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.5e-84	36.00	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	4.4e-31	29.52	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Pay0007360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BWW5	0.0e+00	76.81	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UG95	0.0e+00	76.70	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A445LQ30	0.0e+00	53.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Glycine soja OX=3...	[more]
A0A438D994	0.0e+00	55.54	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438K404	0.0e+00	54.10	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of Pay0007360 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04201.1	0.0e+00	76.81	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0052755.1	0.0e+00	76.70	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
RZC25410.1	0.0e+00	53.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]	[more]
RVW32004.1	0.0e+00	55.54	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVX15925.1	0.0e+00	54.10	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Pay0007360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	7.3e-90	38.33	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.1e-24	34.51	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.3e-17	44.66	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	2.2e-09	37.97	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 238..296 e-value: 4.5E-9 score: 38.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 25..95 e-value: 1.9E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..139
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 392..774
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 746..887 e-value: 2.63431E-59 score: 196.535
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 422..653 e-value: 5.1E-62 score: 209.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 150..164 score: 9.125269
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 422..852
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 148..172
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 246..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007360.1	Pay0007360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding