Pay0007263 (gene) Melon (Payzawat) v1

Overview


Name	Pay0007263
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	LysM domain-containing protein
Location	chr06: 6618157 .. 6619229 (-)
RNA-Seq Expression	Pay0007263
Synteny	Pay0007263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAAAAAACAAAAGAGAACAAATAATATAGAATTAAGTGGTTATGGGTAATTAGAAAGAGATGGGGCCGAGGGTGATTTTATATTTAATAGCTTTTTGGCGTTGGGGTCGGGAGAGAAGTTGAGACGACTTCAAAAGTTGAAACCAATCCAAAATGTATAACCCCAACCCCAAGTCCTGAATCCGTAAGCTTAACGTCCCAAACGTCAAACCTCAAATTCCTCCCTCTTCTTAATTAACCACTTTATAAATACCCAATATTTTTTAATTTCCCATCTCCCCAACTCTCTATTTCATTTTATACTCCAAAATTCAGTTCACTTCCGATCCACCACCAGCATGCCCGGCGTCTCTATTCCCAGAAGTAGGCGGCCACAGTACTCGTCGTCTTCACGACCCCTAATCGACGTCGTCTCATGGTACTGCGCGGTGGGGCTATTGGGACTTATCTTGATAGGGTCCATCAGAGAAACTTCCTCCTCCTCCGGTGATCAGGGCAGGTCGTTGAGAGGGAACTTGGTGACTTGGCGTCCCTGCGATGAGATATATGTGGTCGGAGAAGGAGAAACGCTTCATACGATTAGCGATAAGTGCGGTGACCCGTTTATCGTGGAGCGGAACCCCCATATCCATGACCCGGATGACGTTTTCCCCGGTTTGGTTATTAAAATTATTGCCTCCTCCACCCACAATAACCTTCCAACTTCGGATTGATCCATACCTTCTTCAATTCTATTTTATCCTCTTTTTTTTTTTTTTTTCTTTCGACTCCCTAAGGCCAGATTTTACCCACCCCAAATAAAAATTTATAAAAACAAAAAGCATAAACTTTAGGTTTTTTTAGAACTATATATGATTTCCCAGATCGATAGATGTGTATATGATGTCGAGGTTTGTGGATTTTTCTTTTTTTAAGGATATAGAGGTAAAATATATAGCTCATCTTCTTCTCCTGTATGTATAAATAAATATCATAATTAATACATATATCTAAGTAAAGTTGTTTTTTCTCCCTTTTTTTTTATACTCTCAAATGTACAAATTTGATAAATAAATATCGGTCGTAAAAGC

mRNA sequence

GAAGAAAAAAACAAAAGAGAACAAATAATATAGAATTAAGTGGTTATGGGTAATTAGAAAGAGATGGGGCCGAGGGTGATTTTATATTTAATAGCTTTTTGGCGTTGGGGTCGGGAGAGAAGTTGAGACGACTTCAAAAGTTGAAACCAATCCAAAATGTATAACCCCAACCCCAAGTCCTGAATCCGTAAGCTTAACGTCCCAAACGTCAAACCTCAAATTCCTCCCTCTTCTTAATTAACCACTTTATAAATACCCAATATTTTTTAATTTCCCATCTCCCCAACTCTCTATTTCATTTTATACTCCAAAATTCAGTTCACTTCCGATCCACCACCAGCATGCCCGGCGTCTCTATTCCCAGAAGTAGGCGGCCACAGTACTCGTCGTCTTCACGACCCCTAATCGACGTCGTCTCATGGTACTGCGCGGTGGGGCTATTGGGACTTATCTTGATAGGGTCCATCAGAGAAACTTCCTCCTCCTCCGGTGATCAGGGCAGGTCGTTGAGAGGGAACTTGGTGACTTGGCGTCCCTGCGATGAGATATATGTGGTCGGAGAAGGAGAAACGCTTCATACGATTAGCGATAAGTGCGGTGACCCGTTTATCGTGGAGCGGAACCCCCATATCCATGACCCGGATGACGTTTTCCCCGGTTTGGTTATTAAAATTATTGCCTCCTCCACCCACAATAACCTTCCAACTTCGGATTGATCCATACCTTCTTCAATTCTATTTTATCCTCTTTTTTTTTTTTTTTTCTTTCGACTCCCTAAGGCCAGATTTTACCCACCCCAAATAAAAATTTATAAAAACAAAAAGCATAAACTTTAGGTTTTTTTAGAACTATATATGATTTCCCAGATCGATAGATGTGTATATGATGTCGAGGTTTGTGGATTTTTCTTTTTTTAAGGATATAGAGGTAAAATATATAGCTCATCTTCTTCTCCTGTATGTATAAATAAATATCATAATTAATACATATATCTAAGTAAAGTTGTTTTTTCTCCCTTTTTTTTTATACTCTCAAATGTACAAATTTGATAAATAAATATCGGTCGTAAAAGC

Coding sequence (CDS)

ATGCCCGGCGTCTCTATTCCCAGAAGTAGGCGGCCACAGTACTCGTCGTCTTCACGACCCCTAATCGACGTCGTCTCATGGTACTGCGCGGTGGGGCTATTGGGACTTATCTTGATAGGGTCCATCAGAGAAACTTCCTCCTCCTCCGGTGATCAGGGCAGGTCGTTGAGAGGGAACTTGGTGACTTGGCGTCCCTGCGATGAGATATATGTGGTCGGAGAAGGAGAAACGCTTCATACGATTAGCGATAAGTGCGGTGACCCGTTTATCGTGGAGCGGAACCCCCATATCCATGACCCGGATGACGTTTTCCCCGGTTTGGTTATTAAAATTATTGCCTCCTCCACCCACAATAACCTTCCAACTTCGGATTGA

Protein sequence

MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNLPTSD

Homology

[Close]

BLAST of Pay0007263 vs. ExPASy TrEMBL
Match: A0A5A7VAP9 (Peptidoglycan-binding LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7478G00010 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.0e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60
           MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL
Sbjct: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60

Query: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120
           VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL
Sbjct: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120

Query: 121 PTSD 125
           PTSD
Sbjct: 121 PTSD 124

[Close]

BLAST of Pay0007263 vs. ExPASy TrEMBL
Match: A0A1S3AXP2 (uncharacterized protein LOC103484036 OS=Cucumis melo OX=3656 GN=LOC103484036 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.0e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60
           MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL
Sbjct: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60

Query: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120
           VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL
Sbjct: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120

Query: 121 PTSD 125
           PTSD
Sbjct: 121 PTSD 124

[Close]

BLAST of Pay0007263 vs. ExPASy TrEMBL
Match: A0A0A0L5R9 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G179200 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.5e-57
Identity = 116/124 (93.55%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60
           MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRET SSSGD GR LRGNL
Sbjct: 1   MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNL 60

Query: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120
           VTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKIIASSTH NL
Sbjct: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKIIASSTHINL 120

Query: 121 PTSD 125
           PTSD
Sbjct: 121 PTSD 120

[Close]

BLAST of Pay0007263 vs. ExPASy TrEMBL
Match: A0A6J1DRZ3 (uncharacterized protein LOC111023841 OS=Momordica charantia OX=3673 GN=LOC111023841 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 88/115 (76.52%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 7   PRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWR 66
           P  R    + SSRP  DVVSWYCAVG+L LILIGSIRE++ S+G  D GR  RGNLV  R
Sbjct: 5   PTRRIRSGAPSSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGR 64

Query: 67  PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNN 120
           PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII+SS  +N
Sbjct: 65  PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSSNPSN 119

[Close]

BLAST of Pay0007263 vs. ExPASy TrEMBL
Match: A0A6J1J769 (uncharacterized protein LOC111483184 OS=Cucurbita maxima OX=3661 GN=LOC111483184 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.4e-39
Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRG 60
           MP +   R+  P    SSR LIDVVSWYCAV +LGLILIGSIRETSSS+   D  + LRG
Sbjct: 1   MPLLYTSRTEPP----SSRLLIDVVSWYCAVAILGLILIGSIRETSSSASADDGSQMLRG 60

Query: 61  NLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHN 119
           NL+T R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKII  S+HN
Sbjct: 61  NLLTGRACDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKII--SSHN 114

[Close]

BLAST of Pay0007263 vs. NCBI nr
Match: XP_008439155.1 (PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo] >KAA0063496.1 Peptidoglycan-binding LysM domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 260.8 bits (665), Expect = 6.1e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60
           MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL
Sbjct: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60

Query: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120
           VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL
Sbjct: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120

Query: 121 PTSD 125
           PTSD
Sbjct: 121 PTSD 124

[Close]

BLAST of Pay0007263 vs. NCBI nr
Match: KGN57357.2 (hypothetical protein Csa_009741 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 5.2e-57
Identity = 116/124 (93.55%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60
           MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRET SSSGD GR LRGNL
Sbjct: 7   MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNL 66

Query: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120
           VTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKIIASSTH NL
Sbjct: 67  VTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKIIASSTHINL 126

Query: 121 PTSD 125
           PTSD
Sbjct: 127 PTSD 126

[Close]

BLAST of Pay0007263 vs. NCBI nr
Match: XP_004150301.1 (uncharacterized protein LOC101210054 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 5.2e-57
Identity = 116/124 (93.55%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNL 60
           MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRET SSSGD GR LRGNL
Sbjct: 1   MPGVSVPRSRRPQ--SSSRPLIDVVSWYCAVGLLGLILIGSIRET-SSSGD-GRLLRGNL 60

Query: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNL 120
           VTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKIIASSTH NL
Sbjct: 61  VTWRPCDEIYVVGEGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKIIASSTHINL 120

Query: 121 PTSD 125
           PTSD
Sbjct: 121 PTSD 120

[Close]

BLAST of Pay0007263 vs. NCBI nr
Match: XP_022157015.1 (uncharacterized protein LOC111023841 [Momordica charantia])

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-41
Identity = 88/115 (76.52%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 7   PRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWR 66
           P  R    + SSRP  DVVSWYCAVG+L LILIGSIRE++ S+G  D GR  RGNLV  R
Sbjct: 5   PTRRIRSGAPSSRPQTDVVSWYCAVGMLALILIGSIRESTYSAGAADDGRLARGNLVRGR 64

Query: 67  PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNN 120
           PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKII+SS  +N
Sbjct: 65  PCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSSNPSN 119

[Close]

BLAST of Pay0007263 vs. NCBI nr
Match: KAG6576752.1 (hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014795.1 hypothetical protein SDJN02_22424, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174.5 bits (441), Expect = 5.8e-40
Identity = 88/105 (83.81%), Postives = 93/105 (88.57%), Query Frame = 0


Query: 17  SSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG---DQGRSLRGNLVTWRPCDEIYVVG 76
           SSR LIDVVSWYCA+ LLGLILIGSIRETSSSS    D G+ LRGNL+T R CDEIYVVG
Sbjct: 13  SSRLLIDVVSWYCALALLGLILIGSIRETSSSSASADDGGQMLRGNLLTGRACDEIYVVG 72

Query: 77  EGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHN 119
           EGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKII  S+HN
Sbjct: 73  EGETLHTISDKCGDPYIVERNPHIHDPDDVFPGLVIKII--SSHN 115

[Close]

BLAST of Pay0007263 vs. TAIR 10
Match: AT5G62150.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 127.1 bits (318), Expect = 9.8e-30
Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 23  DVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTIS 82
           D+ +W  AV LL LIL+ S+RE ++S+     S+RG+  + +PC+EIY+VGEGETLHTI 
Sbjct: 10  DMSAWCSAVVLLSLILLLSVRENNASN-----SIRGSQFSTKPCEEIYIVGEGETLHTIG 69

Query: 83  DKCGDPFIVERNPHIHDPDDVFPGLVIKI 112
           DKCGDPFIVERNPHIHDPDDVFPGLV+KI
Sbjct: 70  DKCGDPFIVERNPHIHDPDDVFPGLVLKI 93

[Close]

BLAST of Pay0007263 vs. TAIR 10
Match: AT4G25433.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 62/107 (57.94%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 23  DVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRG-NLVTW-------RPCDEIYVVGE 82
           + V+ YC V LL L L GS++  +S+ G  G   RG N   W       RPC+E+YVVGE
Sbjct: 10  NTVASYCLVALLILTLAGSVK--NSNGGGSGEYYRGRNCEVWRGKQMMERPCEELYVVGE 69

Query: 83  GETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIASSTHNNLP 122
           G+TLH+IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+     H NLP
Sbjct: 70  GDTLHSISEKCGDPFIVERNPHIHDPDDVFPGLLIKL-----HINLP 109

[Close]

BLAST of Pay0007263 vs. TAIR 10
Match: AT3G52790.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21
Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 16  SSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTW-----RP-CDEI 75
           SSS  + + +SWYCAV    ++L+ S +     S +     + +++       RP CDEI
Sbjct: 4   SSSMAVAEKISWYCAVFAAMMLLMNSFQVAQEGSTEIVEKQQPSMMITGYSHRRPACDEI 63

Query: 76  YVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIAS 115
           Y V EGETL TIS+KCGDP+IVE NPHIHD DD+FPGL+I+I  S
Sbjct: 64  YEVKEGETLQTISEKCGDPYIVEGNPHIHDHDDLFPGLLIRITPS 108

The following BLAST results are available for this feature:

BLAST of Pay0007263 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0007263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAP9	3.0e-66	100.00	Peptidoglycan-binding LysM domain-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3AXP2	3.0e-66	100.00	uncharacterized protein LOC103484036 OS=Cucumis melo OX=3656 GN=LOC103484036 PE=...	[more]
A0A0A0L5R9	2.5e-57	93.55	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G179200 PE=4 S...	[more]
A0A6J1DRZ3	1.9e-41	76.52	uncharacterized protein LOC111023841 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1J769	1.4e-39	75.00	uncharacterized protein LOC111483184 OS=Cucurbita maxima OX=3661 GN=LOC111483184...	[more]

BLAST of Pay0007263 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439155.1	6.1e-66	100.00	PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo] >KAA0063496.1 Pep...	[more]
KGN57357.2	5.2e-57	93.55	hypothetical protein Csa_009741 [Cucumis sativus]	[more]
XP_004150301.1	5.2e-57	93.55	uncharacterized protein LOC101210054 [Cucumis sativus]	[more]
XP_022157015.1	4.0e-41	76.52	uncharacterized protein LOC111023841 [Momordica charantia]	[more]
KAG6576752.1	5.8e-40	83.81	hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0007263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62150.1	9.8e-30	66.29	peptidoglycan-binding LysM domain-containing protein	[more]
AT4G25433.1	1.2e-27	57.94	peptidoglycan-binding LysM domain-containing protein	[more]
AT3G52790.1	1.7e-21	48.57	peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 70..111 e-value: 2.2E-4 score: 21.2
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 69..111 e-value: 4.78855E-5 score: 36.3093
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 61..120 e-value: 2.9E-7 score: 31.9
None	No IPR available	PANTHER	PTHR33648:SF31	PROTEIN, PUTATIVE-RELATED	coord: 16..118
None	No IPR available	PANTHER	PTHR33648	EMBRYO SAC 1	coord: 16..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0007263.1	Pay0007263.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity