Pay0007186 (gene) Melon (Payzawat) v1

Overview
NamePay0007186
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Locationchr06: 11639510 .. 11640016 (-)
RNA-Seq ExpressionPay0007186
SyntenyPay0007186
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCG

mRNA sequence

ATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCG

Coding sequence (CDS)

ATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCG

Protein sequence

MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Homology
[Close]
BLAST of Pay0007186 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 7   VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKEL 66
           +AY SR L   E+NY T + E+ A++++L   R YLYG   I+++TDH+ L +    +  
Sbjct: 461 IAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNF 520

Query: 67  NMRQRRWLELVKDYDCEILYHPGKANVVADALSR 100
           N + +RW   +++Y+CE++Y PGK+NVVADALSR
Sbjct: 521 NAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]
BLAST of Pay0007186 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 43/98 (43.88%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 2   QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 61
           Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L + + 
Sbjct: 526 QDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYR 585

Query: 62  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 100
            K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 586 MKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]
BLAST of Pay0007186 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 0 

Query: 2   QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFF 61
           Q+G+ +   SR LK  EQNY T++ EL A+V+AL   +++LYG + I IFTDH+ L +  
Sbjct: 512 QEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAV 571

Query: 62  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK 101
             +  N + +RW   +  ++ ++ Y PGK N VADALSR+
Sbjct: 572 ADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSRQ 611

[Close]
BLAST of Pay0007186 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0 

Query: 2   QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 61
           Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++   
Sbjct: 525 QNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHN 584

Query: 62  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 100
            KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 585 LKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]
BLAST of Pay0007186 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-12
Identity = 48/156 (30.77%), Postives = 78/156 (50.00%), Query Frame = 0 

Query: 7   VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE 66
           V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735 VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67  --LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAE 126
              N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   
Sbjct: 795 EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127 IAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 159
           I          + Q+++    + +++   +ND  L+
Sbjct: 855 INF--------VNQISITDDFKNQVVTEYTNDTKLL 875

[Close]
BLAST of Pay0007186 vs. ExPASy TrEMBL
Match: A0A5A7VGW8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00940 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 669 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 728

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 729 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 788

Query: 121 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
           AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 789 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 837

[Close]
BLAST of Pay0007186 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 874  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 933

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 934  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 993

Query: 121  AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
            AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 994  AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 1042

[Close]
BLAST of Pay0007186 vs. ExPASy TrEMBL
Match: A0A5A7V223 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3980G00010 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 1021 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 1080

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 1081 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 1140

Query: 121  AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
            AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 1141 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 1189

[Close]
BLAST of Pay0007186 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 960  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 1019

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 1020 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 1079

Query: 121  AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
            AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 1080 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 1128

[Close]
BLAST of Pay0007186 vs. ExPASy TrEMBL
Match: A0A5A7T0Y9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00570 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 748 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 807

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 808 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 867

Query: 121 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
           AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 868 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 916

[Close]
BLAST of Pay0007186 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 5.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 884  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 943

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 944  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 1003

Query: 121  AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
            AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 1004 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 1052

[Close]
BLAST of Pay0007186 vs. NCBI nr
Match: KAA0036553.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 5.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 748 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 807

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 808 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 867

Query: 121 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
           AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 868 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 916

[Close]
BLAST of Pay0007186 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 5.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 960  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 1019

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 1020 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 1079

Query: 121  AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
            AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 1080 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 1128

[Close]
BLAST of Pay0007186 vs. NCBI nr
Match: KAA0059062.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 5.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1    MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
            MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 905  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 964

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 965  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 1024

Query: 121  AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
            AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 1025 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 1073

[Close]
BLAST of Pay0007186 vs. NCBI nr
Match: KAA0032207.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 5.9e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 60
           MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Sbjct: 152 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF 211

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER
Sbjct: 212 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER 271

Query: 121 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 170
           AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Sbjct: 272 AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA 320

The following BLAST results are available for this feature:
BLAST of Pay0007186 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8I7P91.5e-1743.62Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P043231.7e-1643.88Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P104012.2e-1642.00Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas... [more]
P208252.6e-1441.84Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q9UR071.9e-1230.77Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
BLAST of Pay0007186 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VGW82.9e-88100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48... [more]
A0A5A7UAA82.9e-88100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5A7V2232.9e-88100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39... [more]
A0A5A7V1N32.9e-88100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89... [more]
A0A5A7T0Y92.9e-88100.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19... [more]
BLAST of Pay0007186 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048687.15.9e-88100.00pol protein [Cucumis melo var. makuwa][more]
KAA0036553.15.9e-88100.00pol protein [Cucumis melo var. makuwa][more]
KAA0062112.15.9e-88100.00pol protein [Cucumis melo var. makuwa][more]
KAA0059062.15.9e-88100.00pol protein [Cucumis melo var. makuwa][more]
KAA0032207.15.9e-88100.00pol protein [Cucumis melo var. makuwa][more]
BLAST of Pay0007186 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.370coord: 2..50
e-value: 1.8E-6
score: 29.8
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 1..100
NoneNo IPR availablePANTHERPTHR24559:SF355PROTEIN, PUTATIVE-RELATEDcoord: 1..100
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 2..101
e-value: 5.2076E-54
score: 165.358
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 5..79
e-value: 1.3E-27
score: 96.1
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0007186.1Pay0007186.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006508 proteolysis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding