Pay0007007 (gene) Melon (Payzawat) v1

Overview
NamePay0007007
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRiboflavin synthase
Locationchr11: 18727403 .. 18728239 (-)
RNA-Seq ExpressionPay0007007
SyntenyPay0007007
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTACTTTTTCTTCCCTCTCTACTGCTACAGCACTCTCCAATATCCCCAGAATGCTTCCTCCAATGGGGAATCTTCATCTCCCATCCTCCCAATTTTTCCCCAACTTCAATTTCAATACCAAAACGTCTCTTTTCACTCTATTCACTTCCACCCACAAGCCCCAACTTTGTTACAGATCTCGCCCTAGGGCCTCCGTTCAATGTCTTTTCACTGGCATTGTTGAAGAAATTGGCCATGTTAAAAACTTGGGTATTGGTGAAAATGGGGGATATGATTTGGAAATTAATGCAAAAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTTAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAATTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCTATGGATCCTGAAGGGGATTCCCTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCAAAGGGATTTATTGCTGTGGATGGGACTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGAAAAATGTGGTCATTCCGTTGAAGAAAGTTGGACACTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCCATCAATCCCATTGAGTCTACATGA

mRNA sequence

ATGTCTACTTTTTCTTCCCTCTCTACTGCTACAGCACTCTCCAATATCCCCAGAATGCTTCCTCCAATGGGGAATCTTCATCTCCCATCCTCCCAATTTTTCCCCAACTTCAATTTCAATACCAAAACGTCTCTTTTCACTCTATTCACTTCCACCCACAAGCCCCAACTTTGTTACAGATCTCGCCCTAGGGCCTCCGTTCAATGTCTTTTCACTGGCATTGTTGAAGAAATTGGCCATGTTAAAAACTTGGGTATTGGTGAAAATGGGGGATATGATTTGGAAATTAATGCAAAAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTTAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAATTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCTATGGATCCTGAAGGGGATTCCCTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCAAAGGGATTTATTGCTGTGGATGGGACTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGAAAAATGTGGTCATTCCGTTGAAGAAAGTTGGACACTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCCATCAATCCCATTGAGTCTACATGA

Coding sequence (CDS)

ATGTCTACTTTTTCTTCCCTCTCTACTGCTACAGCACTCTCCAATATCCCCAGAATGCTTCCTCCAATGGGGAATCTTCATCTCCCATCCTCCCAATTTTTCCCCAACTTCAATTTCAATACCAAAACGTCTCTTTTCACTCTATTCACTTCCACCCACAAGCCCCAACTTTGTTACAGATCTCGCCCTAGGGCCTCCGTTCAATGTCTTTTCACTGGCATTGTTGAAGAAATTGGCCATGTTAAAAACTTGGGTATTGGTGAAAATGGGGGATATGATTTGGAAATTAATGCAAAAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTTAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAATTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCTATGGATCCTGAAGGGGATTCCCTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCAAAGGGATTTATTGCTGTGGATGGGACTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGAAAAATGTGGTCATTCCGTTGAAGAAAGTTGGACACTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCCATCAATCCCATTGAGTCTACATGA

Protein sequence

MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST
Homology
BLAST of Pay0007007 vs. ExPASy Swiss-Prot
Match: Q9Y7P0 (Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rib5 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 8.7e-47
Identity = 100/210 (47.62%), Postives = 141/210 (67.14%), Query Frame = 0

Query: 70  LFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSE 129
           +FTG+VE IG VK++    + G+ ++I A  +L+  + GDSIAVNGTCLTVT FD     
Sbjct: 1   MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRY--H 60

Query: 130 FKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDS 189
           F VG+APE+LR T+L +   G PVNLERAV   +RMGGHFVQGHVD   EI+    +G++
Sbjct: 61  FTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEA 120

Query: 190 LWIKVKTSEA-LLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKV 249
           +    +  +  +L YIV KG+IA+DGTSLT+  V  D+  F+ M+++YTQ  V++  K V
Sbjct: 121 IDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHV--DDSTFSIMMISYTQSKVIMAKKNV 180

Query: 250 GHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           G LVN+EVD +GKY ++L+     + I+ T
Sbjct: 181 GDLVNVEVDQIGKYTEKLVEAHIADWIKKT 206

BLAST of Pay0007007 vs. ExPASy Swiss-Prot
Match: A5DB51 (Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=RIB5 PE=2 SV=3)

HSP 1 Score: 185.3 bits (469), Expect = 9.6e-46
Identity = 100/214 (46.73%), Postives = 138/214 (64.49%), Query Frame = 0

Query: 70  LFTGIVEEIGHV-----KNLGIGENGGYDLEI-NAKTVLEGVNLGDSIAVNGTCLTVTAF 129
           +FTG+VE IG V     K+       G  + I +   +LE V LGDSI  NG CLTVT F
Sbjct: 1   MFTGLVEHIGTVLQVTEKDTTASGGDGVSMVIGDCSKILEDVQLGDSICTNGVCLTVTEF 60

Query: 130 DHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISM 189
           D   S+FKVG++PETLR++ L EL PGS VNLERAV+   RMGGH VQGHVD    I++ 
Sbjct: 61  DMARSQFKVGISPETLRRSDLGELKPGSKVNLERAVKADVRMGGHVVQGHVDTIATIVNR 120

Query: 190 DPEGDSLWIKVKTSEALL-NYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVV 249
             +G+++    K  ++    YIV KGFIA+DGTSLTV DV  ++  F+  +V+YTQ+ V+
Sbjct: 121 RGDGNAINFTFKLRDSQYGKYIVEKGFIAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVI 180

Query: 250 IPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIE 277
           +PLK  G  VN+EVD+ GK +++ +    ++ I+
Sbjct: 181 MPLKNSGDSVNIEVDLTGKLIEKQIELSLLSYIK 214

BLAST of Pay0007007 vs. ExPASy Swiss-Prot
Match: P50854 (Riboflavin synthase OS=Actinobacillus pleuropneumoniae OX=715 GN=ribE PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-45
Identity = 96/199 (48.24%), Postives = 134/199 (67.34%), Query Frame = 0

Query: 70  LFTGIVEEIGHVKNLGIGENGGYD-LEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLS 129
           +FTGI+EE+G +    I + G +  + INA  VL+ V+LGD+IAVNG CLTVT+F    +
Sbjct: 1   MFTGIIEEVGKIAQ--IHKQGEFAVVTINATKVLQDVHLGDTIAVNGVCLTVTSFSS--N 60

Query: 130 EFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGD 189
           +F   +  ETL++TSL EL   SPVNLERA+    R GGH V GH+DGTGEI  + P  +
Sbjct: 61  QFTADVMSETLKRTSLGELKSNSPVNLERAMAANGRFGGHIVSGHIDGTGEIAEITPAHN 120

Query: 190 SLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKV 249
           S W ++KTS  L+ YI+ KG I +DG SLTVVD   D+++F   ++ +T K   +  KK+
Sbjct: 121 STWYRIKTSPKLMRYIIEKGSITIDGISLTVVDT--DDESFRVSIIPHTIKETNLGSKKI 180

Query: 250 GHLVNLEVDILGKYVQRLL 268
           G +VNLE DI+GKY+++ L
Sbjct: 181 GSIVNLENDIVGKYIEQFL 193

BLAST of Pay0007007 vs. ExPASy Swiss-Prot
Match: P38145 (Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RIB5 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40
Identity = 93/205 (45.37%), Postives = 131/205 (63.90%), Query Frame = 0

Query: 70  LFTGIVEEIGHV---KNLGIGENGGYDLEI---NAKTVLEGVNLGDSIAVNGTCLTVTAF 129
           +FTGIVE +G V         E+GG  + I   NA ++L   ++GDSIAVNG CLTVT F
Sbjct: 1   MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEF 60

Query: 130 DHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISM 189
           ++    FKVG++PET++++++     G+ VNLERAV    R GGH+VQGHVD    I+S 
Sbjct: 61  NN--DSFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSR 120

Query: 190 DPEGDSLWIKVK-TSEALLNYIVPKGFIAVDGTSLTV--VDVFDDEKAFNFMLVAYTQKN 249
            PEG+S+    +   +    YIV KGFI +DGTSLT+  VD      AF   ++ +TQ N
Sbjct: 121 RPEGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKVDPLSQGGAFYISMIKHTQDN 180

Query: 250 VVIPLKKVGHLVNLEVDILGKYVQR 266
           V++PLKK+G  VN+EVD+ GK +++
Sbjct: 181 VIMPLKKIGDEVNIEVDLTGKIIEK 203

BLAST of Pay0007007 vs. ExPASy Swiss-Prot
Match: P16440 (Riboflavin synthase OS=Bacillus subtilis (strain 168) OX=224308 GN=ribE PE=1 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 3.7e-37
Identity = 87/211 (41.23%), Postives = 127/211 (60.19%), Query Frame = 0

Query: 70  LFTGIVEEIGHVKNLGIGENGGY--DLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQL 129
           +FTGI+EE G ++++   +  G+   L I    +LE V+LGDSIAVNG CLTVT  D   
Sbjct: 1   MFTGIIEETGTIESM---KKAGHAMALTIKCSKILEDVHLGDSIAVNGICLTVT--DFTK 60

Query: 130 SEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEG 189
           ++F V + PET++ TSL +L+ GS VNLERA+    R GGHFV GHVDGT EI  ++ + 
Sbjct: 61  NQFTVDVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKS 120

Query: 190 DSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKK 249
           ++++  +K   +L   +V KG I VDG SLT+  + +D       L+ +T    +   K 
Sbjct: 121 NAVYYDLKMDPSLTKTLVLKGSITVDGVSLTIFGLTED--TVTISLIPHTISETIFSEKT 180

Query: 250 VGHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           +G  VN+E D++GKY+ R L     N  + T
Sbjct: 181 IGSKVNIECDMIGKYMYRFLHKANENKTQQT 204

BLAST of Pay0007007 vs. ExPASy TrEMBL
Match: A0A5D3C0R6 (Riboflavin synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001790 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 3.8e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR
Sbjct: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 278

BLAST of Pay0007007 vs. ExPASy TrEMBL
Match: A0A5D3C0R4 (Riboflavin synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001590 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 7.2e-153
Identity = 275/278 (98.92%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTAT+LSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR
Sbjct: 1   MSTFSSLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPI+S+
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIKSS 278

BLAST of Pay0007007 vs. ExPASy TrEMBL
Match: A0A5A7V850 (Riboflavin synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004220 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.0e-151
Identity = 273/278 (98.20%), Postives = 277/278 (99.64%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTAT+LSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR
Sbjct: 1   MSTFSSLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           IS+DPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTS TVVDVFDDEKAFNFMLVAYTQKN
Sbjct: 181 ISVDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSWTVVDVFDDEKAFNFMLVAYTQKN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPI+S+
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIKSS 278

BLAST of Pay0007007 vs. ExPASy TrEMBL
Match: A0A0A0KAI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128550 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 262/277 (94.58%), Postives = 269/277 (97.11%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTAT+L NIPRMLPP+G+LHLPSS FFP FNFNTKTSLFTLFTSTHKPQL Y+
Sbjct: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVK+LGI ENGG+DLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDG SLTVVDVFDDEKAFNFMLVAYTQ N
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIES 278
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGA+ PIES
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIES 277

BLAST of Pay0007007 vs. ExPASy TrEMBL
Match: A0A1S3CSC8 (riboflavin synthase OS=Cucumis melo OX=3656 GN=LOC103504295 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.1e-137
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0

Query: 19  MLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEI 78
           MLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEI
Sbjct: 1   MLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEI 60

Query: 79  GHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 138
           GHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET
Sbjct: 61  GHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 120

Query: 139 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 198
           LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE
Sbjct: 121 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 180

Query: 199 ALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDI 258
           ALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDI
Sbjct: 181 ALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDI 240

Query: 259 LGKYVQRL 267
           LGKYVQRL
Sbjct: 241 LGKYVQRL 248

BLAST of Pay0007007 vs. NCBI nr
Match: KAA0062058.1 (riboflavin synthase [Cucumis melo var. makuwa] >TYK04960.1 riboflavin synthase [Cucumis melo var. makuwa])

HSP 1 Score: 553.9 bits (1426), Expect = 7.8e-154
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR
Sbjct: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 278

BLAST of Pay0007007 vs. NCBI nr
Match: TYK04945.1 (riboflavin synthase [Cucumis melo var. makuwa])

HSP 1 Score: 549.7 bits (1415), Expect = 1.5e-152
Identity = 275/278 (98.92%), Postives = 278/278 (100.00%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTAT+LSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR
Sbjct: 1   MSTFSSLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPI+S+
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIKSS 278

BLAST of Pay0007007 vs. NCBI nr
Match: KAA0062075.1 (riboflavin synthase [Cucumis melo var. makuwa])

HSP 1 Score: 545.8 bits (1405), Expect = 2.1e-151
Identity = 273/278 (98.20%), Postives = 277/278 (99.64%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTAT+LSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR
Sbjct: 1   MSTFSSLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           IS+DPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTS TVVDVFDDEKAFNFMLVAYTQKN
Sbjct: 181 ISVDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSWTVVDVFDDEKAFNFMLVAYTQKN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIEST 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPI+S+
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIKSS 278

BLAST of Pay0007007 vs. NCBI nr
Match: XP_031742538.1 (riboflavin synthase-like [Cucumis sativus] >KAE8646856.1 hypothetical protein Csa_020963 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 266/277 (96.03%), Postives = 271/277 (97.83%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFS LSTAT+LSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQL Y+
Sbjct: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGI ENGG+DLEINA+TVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDG SLTVVDVFDDEKAFNFMLVAYTQ N
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIES 278
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGA+ PIES
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIES 277

BLAST of Pay0007007 vs. NCBI nr
Match: XP_011656951.2 (riboflavin synthase [Cucumis sativus] >XP_011656952.2 riboflavin synthase [Cucumis sativus] >KAE8646858.1 hypothetical protein Csa_020849 [Cucumis sativus])

HSP 1 Score: 528.5 bits (1360), Expect = 3.5e-146
Identity = 265/277 (95.67%), Postives = 272/277 (98.19%), Query Frame = 0

Query: 1   MSTFSSLSTATALSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYR 60
           MSTFSSLSTAT+LSNIPRMLPP+G+LHLPSS FFP FNFNTKTSLFTLFTSTH+PQLCY+
Sbjct: 1   MSTFSSLSTATSLSNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHRPQLCYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVK+LGI ENGG+DLEINAKTVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240
           ISMD EGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN
Sbjct: 181 ISMDLEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAINPIES 278
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAI PIES
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAIKPIES 277

BLAST of Pay0007007 vs. TAIR 10
Match: AT2G20690.1 (lumazine-binding family protein )

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-84
Identity = 157/237 (66.24%), Postives = 193/237 (81.43%), Query Frame = 0

Query: 37  FNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEIGHVKNLGIGENGGYDLEI 96
           F+  +K+S  +L TS  + +  +R R   S++ +FTGIVEE+G VK+LG+ ++GG+DL+I
Sbjct: 32  FDCVSKSSKLSLKTSCGRSRTHHR-RQNLSIRSVFTGIVEEMGEVKDLGMADHGGFDLKI 91

Query: 97  NAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLE 156
            A+ VLE V LGDSIAVNGTCLTVT F+ +  EF VGLAPETLRKTSL EL  GSPVNLE
Sbjct: 92  GARVVLEDVKLGDSIAVNGTCLTVTEFNAE--EFTVGLAPETLRKTSLEELKKGSPVNLE 151

Query: 157 RAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTS 216
           RA+QP+SRMGGH VQGHVDGTG I SM+ EGDSLW+KVK  + LL YIVPKGF+AVDGTS
Sbjct: 152 RALQPVSRMGGHVVQGHVDGTGVIESMEVEGDSLWVKVKADKGLLKYIVPKGFVAVDGTS 211

Query: 217 LTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAIN 274
           LTVVDVFD+E  FNFM++AYTQ+NVVIP KK+G  VNLEVDI+GKYV+RLL++G  +
Sbjct: 212 LTVVDVFDEESCFNFMMIAYTQQNVVIPTKKIGQKVNLEVDIMGKYVERLLTSGGFS 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9Y7P08.7e-4747.62Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=28... [more]
A5DB519.6e-4646.73Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / D... [more]
P508541.6e-4548.24Riboflavin synthase OS=Actinobacillus pleuropneumoniae OX=715 GN=ribE PE=3 SV=1[more]
P381451.6e-4045.37Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=... [more]
P164403.7e-3741.23Riboflavin synthase OS=Bacillus subtilis (strain 168) OX=224308 GN=ribE PE=1 SV=... [more]
Match NameE-valueIdentityDescription
A0A5D3C0R63.8e-154100.00Riboflavin synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G... [more]
A0A5D3C0R47.2e-15398.92Riboflavin synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G... [more]
A0A5A7V8501.0e-15198.20Riboflavin synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G0... [more]
A0A0A0KAI51.2e-14494.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128550 PE=4 SV=1[more]
A0A1S3CSC81.1e-137100.00riboflavin synthase OS=Cucumis melo OX=3656 GN=LOC103504295 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0062058.17.8e-154100.00riboflavin synthase [Cucumis melo var. makuwa] >TYK04960.1 riboflavin synthase [... [more]
TYK04945.11.5e-15298.92riboflavin synthase [Cucumis melo var. makuwa][more]
KAA0062075.12.1e-15198.20riboflavin synthase [Cucumis melo var. makuwa][more]
XP_031742538.11.2e-14696.03riboflavin synthase-like [Cucumis sativus] >KAE8646856.1 hypothetical protein Cs... [more]
XP_011656951.23.5e-14695.67riboflavin synthase [Cucumis sativus] >XP_011656952.2 riboflavin synthase [Cucum... [more]
Match NameE-valueIdentityDescription
AT2G20690.11.1e-8466.24lumazine-binding family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001783Lumazine-binding proteinTIGRFAMTIGR00187TIGR00187coord: 70..271
e-value: 1.1E-61
score: 205.6
IPR001783Lumazine-binding proteinPANTHERPTHR21098RIBOFLAVIN SYNTHASE ALPHA CHAINcoord: 64..276
IPR001783Lumazine-binding proteinCDDcd00402Riboflavin_synthase_likecoord: 71..259
e-value: 5.47692E-90
score: 263.094
IPR026017Lumazine-binding domainPFAMPF00677Lum_bindingcoord: 72..158
e-value: 1.1E-21
score: 76.6
coord: 171..257
e-value: 3.2E-20
score: 71.9
IPR026017Lumazine-binding domainPROSITEPS51177LUMAZINE_BINDcoord: 70..168
score: 25.06521
IPR026017Lumazine-binding domainPROSITEPS51177LUMAZINE_BINDcoord: 169..267
score: 22.486654
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyGENE3D2.40.30.20coord: 173..273
e-value: 2.2E-30
score: 106.2
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyGENE3D2.40.30.20coord: 70..159
e-value: 1.1E-25
score: 91.2
NoneNo IPR availablePANTHERPTHR21098:SF0RIBOFLAVIN SYNTHASEcoord: 64..276
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 70..160
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 164..268

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0007007.1Pay0007007.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009231 riboflavin biosynthetic process
molecular_function GO:0004746 riboflavin synthase activity