Pay0006984 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006984
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	signaling peptide TAXIMIN 1-like
Location	chr12: 22442743 .. 22443098 (-)
RNA-Seq Expression	Pay0006984
Synteny	Pay0006984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTGCTGCTGTTCTGAGAAATGTAACTGCAGGCCTCTCGGCTTTCTTCTTGGCTTGCCGTTTGCCTTTCTCTCCATTTTTGTTGGCTTCGTTGGTGTTGTTATTTGGATAGTTGGGTTAGTATTGTACTTGTGTATGTTGAATATCTTTCTCTTTCTATAACTATTTCATTTCTGGTCTTTTGTTTTATAAGTTTCGCCAATTCATTTGTTTTTATTTGGCTTTGCAGATCGGTTCTGAGTTGCATATGTCCTTGCTGCTTTTGTGTGACTGTGGTAATTGAGTTCGCATTGGCTTTGATCAATGCTCCAATTCTAGTCATGAAATGGTTCACCTCCAAAATCCCATGTTAG

mRNA sequence

ATGTGTTGCTGCTGTTCTGAGAAATGTAACTGCAGGCCTCTCGGCTTTCTTCTTGGCTTGCCGTTTGCCTTTCTCTCCATTTTTGTTGGCTTCGTTGGTGTTGTTATTTGGATAGTTGGATCGGTTCTGAGTTGCATATGTCCTTGCTGCTTTTGTGTGACTGTGGTAATTGAGTTCGCATTGGCTTTGATCAATGCTCCAATTCTAGTCATGAAATGGTTCACCTCCAAAATCCCATGTTAG

Coding sequence (CDS)

ATGTGTTGCTGCTGTTCTGAGAAATGTAACTGCAGGCCTCTCGGCTTTCTTCTTGGCTTGCCGTTTGCCTTTCTCTCCATTTTTGTTGGCTTCGTTGGTGTTGTTATTTGGATAGTTGGATCGGTTCTGAGTTGCATATGTCCTTGCTGCTTTTGTGTGACTGTGGTAATTGAGTTCGCATTGGCTTTGATCAATGCTCCAATTCTAGTCATGAAATGGTTCACCTCCAAAATCCCATGTTAG

Protein sequence

MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFALALINAPILVMKWFTSKIPC

Homology

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BLAST of Pay0006984 vs. ExPASy Swiss-Prot
Match: O82275 (Signaling peptide TAXIMIN 1 OS=Arabidopsis thaliana OX=3702 GN=TAX1 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-24
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 10 NCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFALALINAPIL 69
          +CRPLGFLLGLPFAFLS+ +  +GV+IWIVG +LSCICPCC CVTV++E A+ LI API 
Sbjct: 5  DCRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCICPCCLCVTVLVEIAIGLIKAPIH 64

Query: 70 VMKWFTSKIPC 81
          VM+WF SKIPC
Sbjct: 65 VMEWFMSKIPC 75

[Close]

BLAST of Pay0006984 vs. ExPASy Swiss-Prot
Match: Q1G309 (Signaling peptide TAXIMIN 2 OS=Arabidopsis thaliana OX=3702 GN=TAX2 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-19
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 10 NCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFALALINAPIL 69
          +CRPLGFL+GLPFA +++ +  VG VIWI+G+VLSC+CPCCFC   +  FA+ LI  PI 
Sbjct: 3  DCRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLPIK 62

Query: 70 VMKWFTSKIPC 81
          V++WFT  IPC
Sbjct: 63 VLRWFTHSIPC 73

[Close]

BLAST of Pay0006984 vs. ExPASy TrEMBL
Match: A0A1S3B6N4 (uncharacterized protein LOC103486760 OS=Cucumis melo OX=3656 GN=LOC103486760 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.4e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA
Sbjct: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALINAPILVMKWFTSKIPC
Sbjct: 61 LALINAPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. ExPASy TrEMBL
Match: A0A0A0LV60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478070 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCCSEKCNCRPLGFLL LPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA
Sbjct: 1  MCCCCSEKCNCRPLGFLLSLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALINAPILVMKWFTSKIPC
Sbjct: 61 LALINAPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. ExPASy TrEMBL
Match: A0A6J1CGK2 (uncharacterized protein LOC111010630 OS=Momordica charantia OX=3673 GN=LOC111010630 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.3e-34
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCC EKCNCRPLGFLLGLPFAFL++F+GF+G +IWI GSVL+CICPCC CVTVV+EFA
Sbjct: 1  MCCCCCEKCNCRPLGFLLGLPFAFLALFIGFIGAIIWIFGSVLTCICPCCLCVTVVVEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALINAPILVMKWFTSKIPC
Sbjct: 61 LALINAPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. ExPASy TrEMBL
Match: A0A6J1GSU1 (uncharacterized protein LOC111457111 OS=Cucurbita moschata OX=3662 GN=LOC111457111 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-33
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCC E CNCRPLGFLLGLPFAFL++FVGFVG++IWI GSVLSCICPCC CVTV +EFA
Sbjct: 1  MCCCCCEDCNCRPLGFLLGLPFAFLALFVGFVGIIIWIFGSVLSCICPCCLCVTVAVEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALIN PILVMKWFTSKIPC
Sbjct: 61 LALINVPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. ExPASy TrEMBL
Match: A0A2I0JZW5 (signaling peptide TAXIMIN 1-like OS=Punica granatum OX=22663 GN=LOC116205903 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-29
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 2  CCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFAL 61
          CCCC + C CRPLGFLLGLPFAFLSI +  +GVV+WIVG VLSCICPCCFCVT+++EFAL
Sbjct: 3  CCCCDDDCECRPLGFLLGLPFAFLSILLSIIGVVVWIVGLVLSCICPCCFCVTILVEFAL 62

Query: 62 ALINAPILVMKWFTSKIPC 81
           LI API VMKWFTSKIPC
Sbjct: 63 GLIRAPIAVMKWFTSKIPC 81

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BLAST of Pay0006984 vs. NCBI nr
Match: XP_008443051.1 (PREDICTED: uncharacterized protein LOC103486760 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 1.7e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA
Sbjct: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALINAPILVMKWFTSKIPC
Sbjct: 61 LALINAPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. NCBI nr
Match: XP_004149050.1 (signaling peptide TAXIMIN 1 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 8.6e-37
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCCSEKCNCRPLGFLL LPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA
Sbjct: 1  MCCCCSEKCNCRPLGFLLSLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALINAPILVMKWFTSKIPC
Sbjct: 61 LALINAPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. NCBI nr
Match: XP_022139803.1 (uncharacterized protein LOC111010630 [Momordica charantia])

HSP 1 Score: 153.3 bits (386), Expect = 8.9e-34
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCC EKCNCRPLGFLLGLPFAFL++F+GF+G +IWI GSVL+CICPCC CVTVV+EFA
Sbjct: 1  MCCCCCEKCNCRPLGFLLGLPFAFLALFIGFIGAIIWIFGSVLTCICPCCLCVTVVVEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALINAPILVMKWFTSKIPC
Sbjct: 61 LALINAPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. NCBI nr
Match: XP_022955033.1 (uncharacterized protein LOC111457111 [Cucurbita moschata] >XP_023541227.1 uncharacterized protein LOC111801456 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.0 bits (380), Expect = 4.4e-33
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCC E CNCRPLGFLLGLPFAFL++FVGFVG++IWI GSVLSCICPCC CVTV +EFA
Sbjct: 1  MCCCCCEDCNCRPLGFLLGLPFAFLALFVGFVGIIIWIFGSVLSCICPCCLCVTVAVEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LALIN PILVMKWFTSKIPC
Sbjct: 61 LALINVPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. NCBI nr
Match: KAF3965153.1 (hypothetical protein CMV_010635 [Castanea mollissima])

HSP 1 Score: 139.0 bits (349), Expect = 1.7e-29
Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 1  MCCCCSEKCNCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFA 60
          MCCCC E C CRPLGFLLGLPFAFLS+ V  VG+++WIVG  L+CICPCC CVT+++EFA
Sbjct: 1  MCCCCGEDCECRPLGFLLGLPFAFLSLLVSLVGIIVWIVGLALTCICPCCLCVTIIVEFA 60

Query: 61 LALINAPILVMKWFTSKIPC 81
          LA+I APILVMKWFTSKIPC
Sbjct: 61 LAMIKAPILVMKWFTSKIPC 80

[Close]

BLAST of Pay0006984 vs. TAIR 10
Match: AT2G31090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 3.6e-25
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 10 NCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFALALINAPIL 69
          +CRPLGFLLGLPFAFLS+ +  +GV+IWIVG +LSCICPCC CVTV++E A+ LI API 
Sbjct: 5  DCRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCICPCCLCVTVLVEIAIGLIKAPIH 64

Query: 70 VMKWFTSKIPC 81
          VM+WF SKIPC
Sbjct: 65 VMEWFMSKIPC 75

[Close]

BLAST of Pay0006984 vs. TAIR 10
Match: AT2G20562.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 9.2e-21
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 0


Query: 10 NCRPLGFLLGLPFAFLSIFVGFVGVVIWIVGSVLSCICPCCFCVTVVIEFALALINAPIL 69
          +CRPLGFL+GLPFA +++ +  VG VIWI+G+VLSC+CPCCFC   +  FA+ LI  PI 
Sbjct: 3  DCRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLPIK 62

Query: 70 VMKWFTSKIPC 81
          V++WFT  IPC
Sbjct: 63 VLRWFTHSIPC 73

The following BLAST results are available for this feature:

BLAST of Pay0006984 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82275	5.1e-24	71.83	Signaling peptide TAXIMIN 1 OS=Arabidopsis thaliana OX=3702 GN=TAX1 PE=2 SV=2	[more]
Q1G309	1.3e-19	59.15	Signaling peptide TAXIMIN 2 OS=Arabidopsis thaliana OX=3702 GN=TAX2 PE=2 SV=1	[more]

BLAST of Pay0006984 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6N4	8.4e-38	100.00	uncharacterized protein LOC103486760 OS=Cucumis melo OX=3656 GN=LOC103486760 PE=...	[more]
A0A0A0LV60	4.2e-37	98.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478070 PE=4 SV=1	[more]
A0A6J1CGK2	4.3e-34	86.25	uncharacterized protein LOC111010630 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1GSU1	2.1e-33	86.25	uncharacterized protein LOC111457111 OS=Cucurbita moschata OX=3662 GN=LOC1114571...	[more]
A0A2I0JZW5	2.4e-29	78.48	signaling peptide TAXIMIN 1-like OS=Punica granatum OX=22663 GN=LOC116205903 PE=...	[more]

BLAST of Pay0006984 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443051.1	1.7e-37	100.00	PREDICTED: uncharacterized protein LOC103486760 [Cucumis melo]	[more]
XP_004149050.1	8.6e-37	98.75	signaling peptide TAXIMIN 1 [Cucumis sativus]	[more]
XP_022139803.1	8.9e-34	86.25	uncharacterized protein LOC111010630 [Momordica charantia]	[more]
XP_022955033.1	4.4e-33	86.25	uncharacterized protein LOC111457111 [Cucurbita moschata] >XP_023541227.1 unchar...	[more]
KAF3965153.1	1.7e-29	76.25	hypothetical protein CMV_010635 [Castanea mollissima]	[more]

BLAST of Pay0006984 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31090.1	3.6e-25	71.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20562.1	9.2e-21	59.15	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33834	SIGNALING PEPTIDE TAXIMIN 2	coord: 1..80
None	No IPR available	PANTHER	PTHR33834:SF9	PROTEIN, PUTATIVE-RELATED	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006984.1	Pay0006984.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane