Pay0006697 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006697
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag/pol protein
Location	chr11: 22823744 .. 22826296 (-)
RNA-Seq Expression	Pay0006697
Synteny	Pay0006697

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

mRNA sequence

ATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Coding sequence (CDS)

ATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAG

Protein sequence

MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHSMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT

Homology

[Close]

BLAST of Pay0006697 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.7e-145
Identity = 306/860 (35.58%), Postives = 445/860 (51.74%), Query Frame = 0


Query: 6    FTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKF 65
            F     R    L+LV+SD+CGPM +++ GG +YF+TF DD SR  +VY+++ K +  + F
Sbjct: 470  FQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVF 529

Query: 66   KEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRN 125
            +++ A VE    + +K  RSD GGEY   +F+ Y    GI  + + PGTPQ NGV+ER N
Sbjct: 530  QKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMN 589

Query: 126  RTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFR 185
            RT+++ VRSM+  A LP SFWG AVQTA Y++N  PS  ++ E P ++W  ++ S  H +
Sbjct: 590  RTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLK 649

Query: 186  IWGCP--AHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDH 245
            ++GC   AHV +    KL+ +S  C+F+GY     G   +DP   KV  S +  F  E  
Sbjct: 650  VFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF-RESE 709

Query: 246  IREHKPRSKIVLNEL----------------SKETTE----------------------- 305
            +R     S+ V N +                ++ TT+                       
Sbjct: 710  VRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGV 769

Query: 306  -----------------------------PSTRVV-----EEPSALTRV----------- 365
                                         PST  V      EP +L  V           
Sbjct: 770  EEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMK 829

Query: 366  -----VHSMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG 425
                 + S+  N  + LV+ P G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G
Sbjct: 830  AMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKG 889

Query: 426  ------------------------------------TAFLNGNLEETIYMQQPEGFIIPG 485
                                                TAFL+G+LEE IYM+QPEGF + G
Sbjct: 890  IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAG 949

Query: 486  QEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLY 545
            ++  +CKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY KR    +   L+LY
Sbjct: 950  KKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLY 1009

Query: 546  VDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDK 605
            VDD+L++G D GL+  +K  L+  F MKDLG AQ +LG++I R+R ++ L LSQ  YI++
Sbjct: 1010 VDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIER 1069

Query: 606  IVVKYSMQNSKR-----------------------------------GLLPFRHGVTLPD 665
            ++ +++M+N+K                                    G L +    T PD
Sbjct: 1070 VLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPD 1129

Query: 666  ICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRD 702
            I +AVG+VSR+  NPG  HW AVK IL+YLR T    L +G  D IL GYTD+D   D D
Sbjct: 1130 IAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDID 1189

[Close]

BLAST of Pay0006697 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 351.3 bits (900), Expect = 2.6e-95
Identity = 257/931 (27.60%), Postives = 411/931 (44.15%), Query Frame = 0


Query: 14   KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVE 73
            K PL +VHSD+CGP+         YF+ F D ++ Y   YL+++KS+    F+++ A+ E
Sbjct: 478  KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSE 537

Query: 74   NALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVR 133
               +  +     D G EY+  + + + ++ GI   L+ P TPQ NGVSER  RT+ +  R
Sbjct: 538  AHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKAR 597

Query: 134  SMMSYAHLPNSFWGYAVQTAVYILNCVPSKSV---SETPLKLWNGRKGSLRHFRIWGCPA 193
            +M+S A L  SFWG AV TA Y++N +PS+++   S+TP ++W+ +K  L+H R++G   
Sbjct: 598  TMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATV 657

Query: 194  HV-LENNPKKLEPRSKLCLFVGY-PKG--------------------------TRGGYFY 253
            +V ++N   K + +S   +FVGY P G                          +R   F 
Sbjct: 658  YVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFE 717

Query: 254  D--------------PKDNKVFVST----------NATFLEE------------------ 313
                           P D++  + T          N  FL++                  
Sbjct: 718  TVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQ 777

Query: 314  -------------DHIREHKPRSKIVLNELSKE--------------------------- 373
                           +++ K  +K  LNE  K                            
Sbjct: 778  TEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHL 837

Query: 374  ------------------------TTEPSTRVVEEPSALTRVV---HSMY---------- 433
                                     T+P     EE ++L +VV   H+++          
Sbjct: 838  KEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEI 897

Query: 434  ---------------------FNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKAR 493
                                  N+ W +  +P+    +  +W++  K    G    +KAR
Sbjct: 898  QYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKAR 957

Query: 494  LVAKGYTQV------------------------------------EGTAFLNGNLEETIY 553
            LVA+G+TQ                                       TAFLNG L+E IY
Sbjct: 958  LVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIY 1017

Query: 554  MQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---K 613
            M+ P+G  I      +CKLN++IYGLKQA+R W   F+ A+K   F     + C+Y   K
Sbjct: 1018 MRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDK 1077

Query: 614  RIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKN 673
              IN+++ +++LYVDD+++   D+  + + K++L  +F+M DL E +  +GI+I  + + 
Sbjct: 1078 GNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQE 1137

Query: 674  KMLALSQASYIDKIVVKYSMQN----------------------------SKRGLLPFRH 702
              + LSQ++Y+ KI+ K++M+N                            S  G L +  
Sbjct: 1138 DKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIM 1197

[Close]

BLAST of Pay0006697 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-79
Identity = 236/962 (24.53%), Postives = 384/962 (39.92%), Query Frame = 0


Query: 3    KRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 62
            K PF+     +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  
Sbjct: 510  KVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 569

Query: 63   EKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSE 122
            E F  +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+SE
Sbjct: 570  ETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSE 629

Query: 123  RRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLR 182
            R++R +++   +++S+A +P ++W YA   AVY++N +P+  +  E+P +   G   +  
Sbjct: 630  RKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYD 689

Query: 183  HFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLE 242
              R++GC  +  +   N  KL+ +S+ C+F+GY            + +++++S +  F E
Sbjct: 690  KLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDE 749

Query: 243  E-----------DHIREHKPRSKIVLN--------------------------------- 302
                          ++E +  S  V +                                 
Sbjct: 750  NCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAP 809

Query: 303  ------------------------------------------------------------ 362
                                                                        
Sbjct: 810  FRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNE 869

Query: 363  -------------ELSKETTEPSTR-------------VVEEPSALTRVV---------- 422
                         + S  +  P+T              ++  P  L ++V          
Sbjct: 870  SPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNT 929

Query: 423  HSM--------------------------------------------------YFNSVWD 482
            HSM                                                    N  WD
Sbjct: 930  HSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWD 989

Query: 483  LVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG--------------- 542
            LV  P   V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G               
Sbjct: 990  LVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTS 1049

Query: 543  ---------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGL 602
                                  AFL G L + +YM QP GFI   +   +CKL +++YGL
Sbjct: 1050 IRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGL 1109

Query: 603  KQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTD 662
            KQA R+W +     + + GF   V +  ++     KS+ ++++YVDDIL+ GND  LL +
Sbjct: 1110 KQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHN 1169

Query: 663  IKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP 706
                L+ +F +KD  E  + LGI+    R    L LSQ  YI  ++ + +M  +K    P
Sbjct: 1170 TLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTP 1229

[Close]

BLAST of Pay0006697 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-79
Identity = 235/966 (24.33%), Postives = 384/966 (39.75%), Query Frame = 0


Query: 3    KRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 62
            K PF+     + +PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  
Sbjct: 489  KVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 548

Query: 63   EKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSE 122
            + F  +K+ VEN     I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SE
Sbjct: 549  DTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSE 608

Query: 123  RRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLR 182
            R++R +++M  +++S+A +P ++W YA   AVY++N +P+  +  ++P +   G+  +  
Sbjct: 609  RKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYE 668

Query: 183  HFRIWGCPAH--VLENNPKKLEPRSKLCLFVGY------------PKGTRGGYFYDPKDN 242
              +++GC  +  +   N  KLE +SK C F+GY            P G      +   D 
Sbjct: 669  KLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDE 728

Query: 243  KVFVSTNATF-------------------------------------------------- 302
            + F  +   F                                                  
Sbjct: 729  RCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPS 788

Query: 303  -----------------------------------LEEDHIREHKPRSKIVLNE------ 362
                                                 + H  ++   +  +LN       
Sbjct: 789  PLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSP 848

Query: 363  ----------------LSKETTEPSTRVVE------------------------------ 422
                             S     PST + E                              
Sbjct: 849  SPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQA 908

Query: 423  --------------------------------EP-------------SALTRVVHSMYFN 482
                                            EP              A+   +++   N
Sbjct: 909  PVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGN 968

Query: 483  SVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG----------- 542
              WDLV   P  V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G           
Sbjct: 969  HTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVI 1028

Query: 543  -------------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRS 602
                                      AFL G L + +YM QP GF+   +   +C+L ++
Sbjct: 1029 KSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKA 1088

Query: 603  IYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIG 662
            IYGLKQA R+W +   T + + GF   + +  ++     +S+ ++++YVDDIL+ GND  
Sbjct: 1089 IYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTV 1148

Query: 663  LLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKR 706
            LL      L+ +F +K+  +  + LGI+    R  + L LSQ  Y   ++ + +M  +K 
Sbjct: 1149 LLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKP 1208

[Close]

BLAST of Pay0006697 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 6.5e-30
Identity = 97/304 (31.91%), Postives = 136/304 (44.74%), Query Frame = 0


Query: 334 TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 393
           TAFLN  ++E IY++QP GF+       + +L   +YGLKQA   WN   +  +K  GF 
Sbjct: 5   TAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFC 64

Query: 394 QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVL 453
           +   E  +Y R  +    ++ +YVDD+L+      +   +KQ L   + MKDLG+    L
Sbjct: 65  RHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFL 124

Query: 454 GIQIFRDRKNKMLALSQASYIDKI----------VVKYSMQNSKR--------------- 513
           G+ I +   N  + LS   YI K           + +  + NSK                
Sbjct: 125 GLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPY 184

Query: 514 ----GLLPFRHGVTLPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGS- 573
               G L F      PDI Y V ++SR+   P   H  + + +L+YL  TR   L Y S 
Sbjct: 185 QSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSG 244

Query: 574 KDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADSTMEAEYVAACE 607
             L LT Y D+      D   ST G V  L G  V W S K +G I   + EAEY+ A E
Sbjct: 245 SQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASE 304

[Close]

BLAST of Pay0006697 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1385.2 bits (3584), Expect = 0.0e+00
Identity = 708/850 (83.29%), Postives = 708/850 (83.29%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 494  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 614  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 734  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 794  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 854  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 913

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 914  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 973

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 974  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 1033

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 1034 KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 1093

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 1094 RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1153

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1154 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1213

[Close]

BLAST of Pay0006697 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1385.2 bits (3584), Expect = 0.0e+00
Identity = 708/850 (83.29%), Postives = 708/850 (83.29%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 494  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 614  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 734  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 794  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 854  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 913

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 914  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 973

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 974  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 1033

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 1034 KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 1093

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 1094 RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1153

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1154 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1213

[Close]

BLAST of Pay0006697 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 1385.2 bits (3584), Expect = 0.0e+00
Identity = 708/850 (83.29%), Postives = 708/850 (83.29%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 493  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 552

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 553  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 612

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 613  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 672

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 673  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 732

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 733  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 792

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 793  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 852

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 853  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 912

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 913  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 972

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 973  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 1032

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 1033 KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 1092

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 1093 RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1152

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1153 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1212

[Close]

BLAST of Pay0006697 vs. ExPASy TrEMBL
Match: A0A5A7SNP8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002160 PE=4 SV=1)

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 705/850 (82.94%), Postives = 705/850 (82.94%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 353  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 412

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAP TPQQNGV
Sbjct: 413  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPDTPQQNGV 472

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNG KGSL
Sbjct: 473  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGHKGSL 532

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 533  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 592

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVH                    
Sbjct: 593  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVRSSTRTHQPQSLREPRRSG 652

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 653  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 712

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 713  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 772

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 773  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 832

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 833  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 892

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 893  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 952

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 953  RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1012

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1013 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1072

[Close]

BLAST of Pay0006697 vs. ExPASy TrEMBL
Match: A0A5D3BHG7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G00150 PE=4 SV=1)

HSP 1 Score: 1376.3 bits (3561), Expect = 0.0e+00
Identity = 704/850 (82.82%), Postives = 706/850 (83.06%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 279  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSE 338

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMEC I+SQLSAPGTPQQNGV
Sbjct: 339  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGV 398

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSM+SYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 399  SERRNRTLLDMVRSMISYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 458

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 459  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 518

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 519  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 578

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 579  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 638

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 639  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 698

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 699  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 758

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 759  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 818

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 819  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 878

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 879  RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 938

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 939  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 998

[Close]

BLAST of Pay0006697 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1385.2 bits (3584), Expect = 0.0e+00
Identity = 708/850 (83.29%), Postives = 708/850 (83.29%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 493  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 552

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 553  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 612

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 613  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 672

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 673  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 732

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 733  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 792

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 793  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 852

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 853  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 912

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 913  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 972

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 973  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 1032

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 1033 KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 1092

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 1093 RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1152

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1153 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1212

[Close]

BLAST of Pay0006697 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1385.2 bits (3584), Expect = 0.0e+00
Identity = 708/850 (83.29%), Postives = 708/850 (83.29%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 494  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 614  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 734  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 794  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 854  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 913

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 914  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 973

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 974  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 1033

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 1034 KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 1093

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 1094 RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1153

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1154 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1213

[Close]

BLAST of Pay0006697 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1385.2 bits (3584), Expect = 0.0e+00
Identity = 708/850 (83.29%), Postives = 708/850 (83.29%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 494  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 553

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV
Sbjct: 554  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 613

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 614  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 673

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 674  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 733

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 734  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 793

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 794  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 853

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 854  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 913

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 914  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 973

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 974  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 1033

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 1034 KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 1093

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 1094 RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1153

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1154 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1213

[Close]

BLAST of Pay0006697 vs. NCBI nr
Match: KAA0026233.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 705/850 (82.94%), Postives = 705/850 (82.94%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 353  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 412

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAP TPQQNGV
Sbjct: 413  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPDTPQQNGV 472

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNG KGSL
Sbjct: 473  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGHKGSL 532

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 533  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 592

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSAL RVVH                    
Sbjct: 593  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALIRVVHVRSSTRTHQPQSLREPRRSG 652

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 653  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 712

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 713  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 772

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 773  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 832

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 833  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 892

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 893  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 952

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 953  RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 1012

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 1013 AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 1072

[Close]

BLAST of Pay0006697 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1376.3 bits (3561), Expect = 0.0e+00
Identity = 704/850 (82.82%), Postives = 706/850 (83.06%), Query Frame = 0


Query: 1    MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSE 60
            MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSE
Sbjct: 279  MTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSE 338

Query: 61   ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGV 120
            ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMEC I+SQLSAPGTPQQNGV
Sbjct: 339  ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGV 398

Query: 121  SERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 180
            SERRNRTLLDMVRSM+SYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL
Sbjct: 399  SERRNRTLLDMVRSMISYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSL 458

Query: 181  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 240
            RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE
Sbjct: 459  RHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE 518

Query: 241  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH-------------------- 300
            DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVH                    
Sbjct: 519  DHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSG 578

Query: 301  ---------------------------------------------------SMYFNSVWD 360
                                                               SMYFNSVWD
Sbjct: 579  RVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWD 638

Query: 361  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG---------------- 420
            LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG                
Sbjct: 639  LVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSI 698

Query: 421  --------------------TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 480
                                TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK
Sbjct: 699  RILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLK 758

Query: 481  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 540
            QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI
Sbjct: 759  QASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDI 818

Query: 541  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 600
            KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF
Sbjct: 819  KQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPF 878

Query: 601  RHGVTL-----------------------------------PDICYAVGIVSRYQSNPGL 660
            RHGVTL                                   PDICYAVGIVSRYQSNPGL
Sbjct: 879  RHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGL 938

Query: 661  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 709
            AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Sbjct: 939  AHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV 998

[Close]

BLAST of Pay0006697 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 229.6 bits (584), Expect = 8.0e-60
Identity = 142/457 (31.07%), Postives = 223/457 (48.80%), Query Frame = 0


Query: 274 ALTRVVHSMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEG 333
           A+   + +M     W++   P   KPIGCKW+YK K  +DG ++ +KARLVAKGYTQ EG
Sbjct: 101 AMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEG 160

Query: 334 ------------------------------------TAFLNGNLEETIYMQQPEGFIIPG 393
                                                AFLNG+L+E IYM+ P G+    
Sbjct: 161 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 220

Query: 394 QE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFL 453
            +      +C L +SIYGLKQASR W ++F   +  +GF Q   +   + +I       +
Sbjct: 221 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCV 280

Query: 454 VLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASY 513
           ++YVDDI++  N+   + ++K  L + F+++DLG  ++ LG++I R      + + Q  Y
Sbjct: 281 LVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKY 340

Query: 514 IDKIVVKYSMQNSKRGLLPFRHGVTLP----------------------------DICYA 573
              ++ +  +   K   +P    VT                              DI +A
Sbjct: 341 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 400

Query: 574 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSK-DLILTGYTDSDFQTDRDSRK 633
           V  +S++   P LAH  AV  IL Y++ T    L Y S+ ++ L  ++D+ FQ+ +D+R+
Sbjct: 401 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRR 460

Query: 634 STSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMS 662
           ST+G    L    + W+S KQ  ++ S+ EAEY A   A  E +WL  F  +L++   +S
Sbjct: 461 STNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLS 520

[Close]

BLAST of Pay0006697 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.0e-18
Identity = 72/226 (31.86%), Postives = 106/226 (46.90%), Query Frame = 0


Query: 412 FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 471
           +L+LYVDDILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 472 SYIDKIVVKYSMQNSKRGLLP-------------------FRHGV--------TLPDICY 531
            Y ++I+    M + K    P                   FR  V        T PDI Y
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 121

Query: 532 AVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSR 591
           AV IV +    P LA +  +K +L+Y++ T  + L ++ +  L +  + DSD+     +R
Sbjct: 122 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 181

Query: 592 KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 610
           +ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Pay0006697 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 58.5 bits (140), Expect = 2.5e-08
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 249 RSKIVLNELS-KETTEPSTRVVEEP-------------SALTRVVHSMYFNSVWDLVDQP 308
           RSK  +N+L+ K +   +T + +EP              A+   + ++  N  W LV  P
Sbjct: 4   RSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPP 63

Query: 309 DGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGTAFL 338
                +GCKW++K K  +DG +   KARLVAKG+ Q EG  F+
Sbjct: 64  VNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFV 106

[Close]

BLAST of Pay0006697 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-07
Identity = 29/82 (35.37%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 125 NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHF 184
           NRT+++ VRSM+    LP +F   A  TAV+I+N  PS +++   P ++W     +  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 185 RIWGCPAHVLENNPKKLEPRSK 206
           R +GC A++   +  KL+PR+K
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

[Close]

BLAST of Pay0006697 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 44.3 bits (103), Expect = 4.8e-04
Identity = 25/73 (34.25%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 497 VTLPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVY-GSKDLILTGYTDSD 556
           +T PD+ +AV  +S++ S    A   AV  +L Y++ T    L Y  + DL L  + DSD
Sbjct: 5   ITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSD 64

Query: 557 FQTDRDSRKSTSG 569
           + +  D+R+S +G
Sbjct: 65  WASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of Pay0006697 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.7e-145	35.58	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.6e-95	27.60	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.0e-79	24.53	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.0e-79	24.33	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	6.5e-30	31.91	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Pay0006697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	0.0e+00	83.29	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	0.0e+00	83.29	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TZD7	0.0e+00	83.29	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7SNP8	0.0e+00	82.94	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00216...	[more]
A0A5D3BHG7	0.0e+00	82.82	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G0015...	[more]

BLAST of Pay0006697 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048404.1	0.0e+00	83.29	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	0.0e+00	83.29	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0031826.1	0.0e+00	83.29	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
KAA0026233.1	0.0e+00	82.94	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ97618.1	0.0e+00	82.82	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Pay0006697 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.0e-60	31.07	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.0e-18	31.86	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	2.5e-08	33.98	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	3.5e-07	35.37	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00240.1	4.8e-04	34.25	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..78
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 334..539 coord: 1..240
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 549..690 e-value: 1.91957E-65 score: 210.788
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 9..185 e-value: 1.2E-39 score: 137.7
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 285..333 e-value: 7.9E-12 score: 45.3 coord: 334..492 e-value: 1.6E-41 score: 142.6
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 14..115 e-value: 4.7E-11 score: 42.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 12..177 score: 23.412086
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 285..657
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 11..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006697.1	Pay0006697.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding