Pay0006662 (gene) Melon (Payzawat) v1

Overview
NamePay0006662
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr05: 3253046 .. 3254692 (-)
RNA-Seq ExpressionPay0006662
SyntenyPay0006662
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTTCTCGTGGACAGTCATAATATACAAGTAAACATGCCTCCACCATCCATTATTTCGCTGTTTTAGTTGATCTTAATTATGCAATTAATATTTTAAAACTTGTTTTCTTATCAATCTTTTAATTTAATTTGCTAAAAAAGATCCGATAAGTACGTTCATTAAAATGCACTATACAAACTTAAAAAGATTCAGTATTATTGGTTAAAACATCATGGGAAAAGTGGAAACCAATTATATTTATTAAGGATATTTTTGTAAAAATGAGTTGATTTCTATTTTACCTTTTGATTATAGATTGTTCTCCTAATGTTTGAAAAGTTCCGTGTTGTGTTAATTTTGTTCAACATTTTAACAGAAATGGATACAAAATCTCTTTCACATATAAAAACCAATCAAAAGATTGGGTAAATGTTTCCAGCAGGAGTTTGACTCATTTAACATGAAATTATACTAAATGACAGAAACCGGAACTTCCTTAATTTGAATACTAAAGCCCAACTTTGGTAATGATTTTCTTATAATTTCATAAACCAAATGATTACTAAACAGACTTAAATCAATCAAATTAACAGAGTATCTAAATTATTAATTGTTTTTATTCTTATGGATAGGTTCAGCAGGTAAATTATGGATAAACTTGATGATGATGTTATACAAGAGAGAGGGAGATTACAAGATTAAGGATACTTTATTCTGCCTTGTTGACTTCTGCCCCGCTCTCTATTTAAAGGTTCTGTGTTGAATAATTAAATACTATTTAACCAAATTTTGCATATTATTTGAGTGAAAAAACTTGTTTGTGAAGTTTGAAATTGGAGAGTCAATAGAAGTTTTGATGTCCTAATTAGTTTTGGTCAGTTTCAATTGTTTAATGTCTTATTCTATGCATTTGTAAATTTTTGTCTTGAGTGGGCAGCTGAAAATGACATATTTGTCCCTCCGTACCCAAAGGAAAACAGGAGCAGCAGCAGTAAAACCAAGGCAGAACCGTACAAGTGTTCTACGAATGCTGTCGAATGTGACAATTCAAACCTCTACCTTGGTCTTGCTCTTGCTCAGGTGAATGCTCTTATATTCACTCAACTGTTTTCTTTTAACAACGTACAAATGTTCTTTCATTATTCATTGAGACTATAATCAGTTTTAAGAATAATAATTAGTTATTAATACTTTAAACTAGCTCATGAATTTTCTCAAAAGTAAATAACATTGGAGAGGAATTGTTCTGGATAGTAAAAAATGTAAGTATTTATGAAACATACCAAAAAAACTAAACTTAAAAGGTCCTTGGAGAGGGACGGATTTTGCTATTTTTTAAAATATCCCATAACATTATGTTCTATTTTTCTAAAAATTTATTGAAAAATATGCTGCATTTTTCTTTGGAAAAGTTATTAAAATAATACATGGCATTTGTGACTAATTTATTTATCTTAGTTGTGTCTGACTGAGTAATGTTTTAAATTAAACAAATAGCTATTTGAACTGTATTAGGCTAGTGTTTTTTATTTTAAAAATAAAAACTTACAGATTTTTTGAATTCTTTTAAACGGTTAAAATCAATTTATCACTTTTTAAATTTCTGAAAATGTTTTTTTAATCACTCAGGGTATGATATCTAATGTTGGAATTTTGAGTTAA

mRNA sequence

ATGCAGGTTCTCGTGGACAGTCATAATATACAAGTTCAGCAGTGGGCAGCTGAAAATGACATATTTGTCCCTCCGTACCCAAAGGAAAACAGGAGCAGCAGCAGTAAAACCAAGGCAGAACCGTACAAGTGTTCTACGAATGCTGTCGAATGTGACAATTCAAACCTCTACCTTGGTCTTGCTCTTGCTCAGGGTATGATATCTAATGTTGGAATTTTGAGTTAA

Coding sequence (CDS)

ATGCAGGTTCTCGTGGACAGTCATAATATACAAGTTCAGCAGTGGGCAGCTGAAAATGACATATTTGTCCCTCCGTACCCAAAGGAAAACAGGAGCAGCAGCAGTAAAACCAAGGCAGAACCGTACAAGTGTTCTACGAATGCTGTCGAATGTGACAATTCAAACCTCTACCTTGGTCTTGCTCTTGCTCAGGGTATGATATCTAATGTTGGAATTTTGAGTTAA

Protein sequence

MQVLVDSHNIQVQQWAAENDIFVPPYPKENRSSSSKTKAEPYKCSTNAVECDNSNLYLGLALAQGMISNVGILS
Homology
[Close]
BLAST of Pay0006662 vs. ExPASy TrEMBL
Match: A0A0A0LKS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000980 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-05
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MQVLVDSHNIQVQQWAAENDIFVPPYPKENRSSSSKTKAEPYKCSTNAVECDNSNL 57
          MQVLVDSHNIQVQQ    N        ++  +++ K +AEP KCSTNAVECDN+NL
Sbjct: 1  MQVLVDSHNIQVQQLKVTN--LSLRTQRKTGAAAVKPRAEPNKCSTNAVECDNANL 54

[Close]
BLAST of Pay0006662 vs. NCBI nr
Match: KGN60591.1 (hypothetical protein Csa_019432 [Cucumis sativus])

HSP 1 Score: 58.2 bits (139), Expect = 3.6e-05
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MQVLVDSHNIQVQQWAAENDIFVPPYPKENRSSSSKTKAEPYKCSTNAVECDNSNL 57
          MQVLVDSHNIQVQQ    N        ++  +++ K +AEP KCSTNAVECDN+NL
Sbjct: 1  MQVLVDSHNIQVQQLKVTN--LSLRTQRKTGAAAVKPRAEPNKCSTNAVECDNANL 54

The following BLAST results are available for this feature:
BLAST of Pay0006662 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0006662 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKS21.7e-0557.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000980 PE=4 SV=1[more]
BLAST of Pay0006662 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60591.13.6e-0557.14hypothetical protein Csa_019432 [Cucumis sativus][more]
BLAST of Pay0006662 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0006662.1Pay0006662.1mRNA