Pay0006516 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006516
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	cytochrome c oxidase subunit 6b-1-like
Location	chr03: 27705323 .. 27707370 (-)
RNA-Seq Expression	Pay0006516
Synteny	Pay0006516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGCCCAGAGCGAACAAACCCTTTCCTTAGCTGAGGTATTTTTTTTCGCACTTTTCACTATCTCTAATTTCTTTGCTATAACTAAAATTTTTCTTTTACTTTTACCTGCCTCCTTCCTTCCTATTTGCATATTTTCCATGGTAATGTGTTTTCATTGCTCGATTCGCAATTGATTTCGATAGATCGGTTGTTATATGGTTGGGAATTTTCAATTATGGAGACATGTGAGATTCTTAGTAGTAAATTCATTATTTTTTATTGTTTAGGAGAAAATTTGTAGAACTGTGGCAAATTCCCTTGATTAGATCCCCCGATTCCCCTGGAAATAGAAATAATTATGAGTTTCATGACTAGATTCCTCGGGTTTGAATCCAACAAATGATTGGAGAATGCTTGCTTTGGGTTCTGGCAGTTTATTTTGCTCTCTTTATTTCACTGCTTTTGAAAAGATCAGGATGTTGACTAAGTTTGAATGTAATGCTAATTATCACTTTCCTTGTTTAGGGAACATGTATCTGTTTTGCACCCCTCATTAAAGAAAAAAATTAATTGAAATTTTGAAAAACAAGAACAATAGCCCAACTCTAAGCAAAGGCTAGTTAATGATTTCATCTTACAACTCTGTAGGAGAGAAGGAAGGAAATAAACAAGCTTAAGCTGCCTAGGTTACCAGGGGAATTGAAATTGATTCAAAGTTAATTTTTGTTCTTAACTAGAACTCCCAGTAATGAACCGTGTTTGTTCATATCTCAATTGGATTGCTATATGAATTCTTGGGGATCTCCTATTTTATGATTTTCTCTGTTTTGCACTTGTATTTTGATTTTCGATAGTGAAATTAAATTTACCTTAAAAGCATAGTTAGAGCACTTCTTTGTTTACTATTGTTCTCATTTAGGGGCATCTTCGTATAGCCCTGTCTCCTTTGCTTTTACGAATTCTCAACCTGCTAATGTTCCAATCTAAGAATTGAGGATGACTCTCTTTTAATTTGGCTTTTAGCAATATTCCTTGAAAGAAAAAGAGGAGAAGGTGGATATACCACTGCCCTCTGAAGTGAAAGAGGTTGAGAACGCTGAAAATGCTGCTCCTGCTGAAGTTGTTGTGAAGAACGATGAACCACCTGTTGAAGCTGATGCTGATCAAAGCAGTGACAATCCCCCTGCTGAAGAATCTCCTGCTGTAGAGGACTCTGAAACTGGTCCTGCTGCTGAGAACGACAGTGGAGCTGCTGCTGAAGAAGAAAGCAGCGGAGCTGGAGAAGAGGAAAATTCTGGTGATCAAGAAAGCACTGACGAGCAACCTGAAATTAAGGTTGGTTGCTGCCCTGATGATTTGTTTATTTTTGCAATACATATCGTGTATGCATATCCTATAGTTTTTTACTTTTGTACGTATTGTTCATTGTTTTTGTTGCTCTCATATGCAGCTCGAAACAGCACCAGTAGATTTCCGTTTCCCCACTACAAATCAAACTAGGCATTGCTTCACCCGGTATATTGAATACCATAGGTAAGTATTAACGTGCTTTTCAACGTTTTCACTTCGTTTCTTAGTCCTTTTATAACTTTGTTTTTGAAAGTATAGATATACTTATCTTTGTAATGCGTTCAGATGCACACAAGCAAAAGGGGAAGGTGCTCCAGAGTGCGAAAAGTTTGCGAAATATTATCGTTCTCTTTGTCCAAGTGAATGGGTATGCGTTTTTCCTAAATTCCTTGATATCGGATTTTCATTCGCCTGTTTTGTGTTGTTGGAACTTATCTATGATTTCATTCTATATCACTAGTTTCATAATTTTAGGACACTGCTTTATCCAATTGTTTATTTCAAAACTATGAGCTCCACGTCCCATGTATTCATCTGAAGCACTTTCGCCAATAGTTTCTACTCCTAACCACGGATCATCCAATAGTTTCTTGCCGAAAGAAGTCCCATCGTAATATCTTGGTGTAAGTAACGTCGTGTATCATGATAATTGTTGCAGGTAGAGAAATGGAACGAGCAGAGGGAGAATGGAACGTTCCCAGGCCCGCTGTAG

mRNA sequence

ATGGCGGAAGCCCAGAGCGAACAAACCCTTTCCTTAGCTGAGCAATATTCCTTGAAAGAAAAAGAGGAGAAGGTGGATATACCACTGCCCTCTGAAGTGAAAGAGGTTGAGAACGCTGAAAATGCTGCTCCTGCTGAAGTTGTTGTGAAGAACGATGAACCACCTGTTGAAGCTGATGCTGATCAAAGCAGTGACAATCCCCCTGCTGAAGAATCTCCTGCTGTAGAGGACTCTGAAACTGGTCCTGCTGCTGAGAACGACAGTGGAGCTGCTGCTGAAGAAGAAAGCAGCGGAGCTGGAGAAGAGGAAAATTCTGGTGATCAAGAAAGCACTGACGAGCAACCTGAAATTAAGCTCGAAACAGCACCAGTAGATTTCCGTTTCCCCACTACAAATCAAACTAGGCATTGCTTCACCCGGTATATTGAATACCATAGATGCACACAAGCAAAAGGGGAAGGTGCTCCAGAGTGCGAAAAGTTTGCGAAATATTATCGTTCTCTTTGTCCAAGTGAATGGGTAGAGAAATGGAACGAGCAGAGGGAGAATGGAACGTTCCCAGGCCCGCTGTAG

Coding sequence (CDS)

ATGGCGGAAGCCCAGAGCGAACAAACCCTTTCCTTAGCTGAGCAATATTCCTTGAAAGAAAAAGAGGAGAAGGTGGATATACCACTGCCCTCTGAAGTGAAAGAGGTTGAGAACGCTGAAAATGCTGCTCCTGCTGAAGTTGTTGTGAAGAACGATGAACCACCTGTTGAAGCTGATGCTGATCAAAGCAGTGACAATCCCCCTGCTGAAGAATCTCCTGCTGTAGAGGACTCTGAAACTGGTCCTGCTGCTGAGAACGACAGTGGAGCTGCTGCTGAAGAAGAAAGCAGCGGAGCTGGAGAAGAGGAAAATTCTGGTGATCAAGAAAGCACTGACGAGCAACCTGAAATTAAGCTCGAAACAGCACCAGTAGATTTCCGTTTCCCCACTACAAATCAAACTAGGCATTGCTTCACCCGGTATATTGAATACCATAGATGCACACAAGCAAAAGGGGAAGGTGCTCCAGAGTGCGAAAAGTTTGCGAAATATTATCGTTCTCTTTGTCCAAGTGAATGGGTAGAGAAATGGAACGAGCAGAGGGAGAATGGAACGTTCCCAGGCCCGCTGTAG

Protein sequence

MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADADQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQRENGTFPGPL

Homology

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BLAST of Pay0006516 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.4e-41
Identity = 115/202 (56.93%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPL-PSEVKEVENAENAAPAEVVVKNDEPPVEAD 60
           MA+A + QT SL+EQY L EKE K D    P EVKEV      AP EV  + +E   E  
Sbjct: 1   MADAVNAQTPSLSEQYHL-EKEVKQDTSAKPVEVKEV------AP-EVTTQAEEVKTE-- 60

Query: 61  ADQSSDNPPAEESPAV--EDSETGPAA---ENDSGAAAE---EESSGAGEEEN--SGDQE 120
             Q+ +  P EE+ +V  E SE+ P +    +++ AAAE   EE+  A EE N  +  +E
Sbjct: 61  --QAKEESPVEEAVSVVEEKSESAPESTEVASEAPAAAEDNAEETPAAAEENNDENASEE 120

Query: 121 STDEQP-EIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSL 180
             +E P EIKLETAP DFRFPTTNQTRHCFTRY+EYHRC  AKG+ APEC+KFAK+YRSL
Sbjct: 121 VAEETPDEIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSL 180

Query: 181 CPSEWVEKWNEQRENGTFPGPL 191
           CPSEWV++WNEQRENGTFPGPL
Sbjct: 181 CPSEWVDRWNEQRENGTFPGPL 190

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BLAST of Pay0006516 vs. ExPASy Swiss-Prot
Match: Q9SUD3 (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 8.9e-35
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 114 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 173
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT AKGE A ECE+FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEW 61

Query: 174 VEKWNEQRENGTFPGPL 191
           V+KWNEQRE GTFPGPL
Sbjct: 62  VDKWNEQRETGTFPGPL 78

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BLAST of Pay0006516 vs. ExPASy Swiss-Prot
Match: Q945L0 (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-34
Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 114 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 173
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT AKGE + +CE+FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEW 61

Query: 174 VEKWNEQRENGTFPGPL 191
           V+KWNEQRE+GTFPGPL
Sbjct: 62  VDKWNEQRESGTFPGPL 78

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BLAST of Pay0006516 vs. ExPASy Swiss-Prot
Match: O94581 (Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 107 DQESTDEQPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYR 166
           +QE  +   +    T   D RFP TNQT+HCF  YI+Y RC +AKGE    C++F   Y+
Sbjct: 3   EQEDQEAPKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQ 62

Query: 167 SLCPSEWVEKWNEQRENGTFPGPL 191
           SLCP EWVE+W+EQRENGTFP P+
Sbjct: 63  SLCPMEWVERWDEQRENGTFPAPI 86

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BLAST of Pay0006516 vs. ExPASy Swiss-Prot
Match: Q01519 (Cytochrome c oxidase subunit 12, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COX12 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 113 EQPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSE 172
           +Q    L T   D RFP  NQT+HC+  Y++YH+C   KGE    C+ F K Y +LCP +
Sbjct: 3   DQENSPLHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLD 62

Query: 173 WVEKWNEQRENGTFPGPL 191
           W+EKW++QRE G F G +
Sbjct: 63  WIEKWDDQREKGIFAGDI 80

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BLAST of Pay0006516 vs. ExPASy TrEMBL
Match: A0A5A7VCW9 (Cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004690 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.5e-96
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA
Sbjct: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60

Query: 61  DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE 120
           DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE
Sbjct: 61  DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE 120

Query: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ 180
           TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ
Sbjct: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ 180

Query: 181 RENGTFPGPL 191
           RENGTFPGPL
Sbjct: 181 RENGTFPGPL 190

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BLAST of Pay0006516 vs. ExPASy TrEMBL
Match: A0A1S3BC78 (cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.5e-96
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA
Sbjct: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60

Query: 61  DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE 120
           DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE
Sbjct: 61  DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE 120

Query: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ 180
           TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ
Sbjct: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ 180

Query: 181 RENGTFPGPL 191
           RENGTFPGPL
Sbjct: 181 RENGTFPGPL 190

[Close]

BLAST of Pay0006516 vs. ExPASy TrEMBL
Match: A0A0A0LNV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.0e-85
Identity = 178/196 (90.82%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQS+QT SL+EQYSLKEKEEKVDIP PSEVKEVEN+ENAAPAEVVVKNDEPPVEA A
Sbjct: 1   MAEAQSQQTPSLSEQYSLKEKEEKVDIPQPSEVKEVENSENAAPAEVVVKNDEPPVEAVA 60

Query: 61  DQSSDNPPAEES------PAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQ 120
           DQSSD PPAEES       AVEDSET PAAENDSG AAEEESSGAGEEENSGDQESTDE+
Sbjct: 61  DQSSDIPPAEESNGDSSAAAVEDSETSPAAENDSG-AAEEESSGAGEEENSGDQESTDER 120

Query: 121 PEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWV 180
           PEIKLETAPVDFRFPTTNQTRHCFTRYIE+HRCTQAKGEGAPECEKFAKYYRSLCPSEWV
Sbjct: 121 PEIKLETAPVDFRFPTTNQTRHCFTRYIEFHRCTQAKGEGAPECEKFAKYYRSLCPSEWV 180

Query: 181 EKWNEQRENGTFPGPL 191
           EKWNEQRENGTFPGPL
Sbjct: 181 EKWNEQRENGTFPGPL 195

[Close]

BLAST of Pay0006516 vs. ExPASy TrEMBL
Match: A0A6J1KAZ5 (cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492226 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 8.5e-73
Identity = 155/197 (78.68%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSE+  SL+EQYSLKEKEEKVDI  PSEVKEVEN+ENAAPAE+VVKNDEPPVEADA
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDILKPSEVKEVENSENAAPAEIVVKNDEPPVEADA 60

Query: 61  DQSSDNPPAEE-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDE 120
           D+ S+NPPA+E       + AVEDSET  A               AGEEE SGDQESTDE
Sbjct: 61  DKGSNNPPADENNGDASAAAAVEDSETNAA---------------AGEEEISGDQESTDE 120

Query: 121 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 180
           QPEIKLETAP DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPEC+KFAKYYRSLCPSEW
Sbjct: 121 QPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPSEW 180

Query: 181 VEKWNEQRENGTFPGPL 191
           VEKWNEQRENG FPGPL
Sbjct: 181 VEKWNEQRENGCFPGPL 182

[Close]

BLAST of Pay0006516 vs. ExPASy TrEMBL
Match: A0A6J1HH76 (cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462906 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.2e-72
Identity = 153/197 (77.66%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSE+  SL+EQYSLKEKEEKVDIP PSEV+EVEN+ENA PAEVVVKNDEPPVEADA
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVEEVENSENAVPAEVVVKNDEPPVEADA 60

Query: 61  DQSSDNPPAE-------ESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDE 120
           DQ S+NPPA+        + AVEDSET  A               AGEEE SGDQESTDE
Sbjct: 61  DQGSNNPPADVNNGDASAAAAVEDSETNAA---------------AGEEEISGDQESTDE 120

Query: 121 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 180
           +PEIKLETAP DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPEC+KFAKYYRSLCP+EW
Sbjct: 121 RPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEW 180

Query: 181 VEKWNEQRENGTFPGPL 191
           VEKWNEQRENG FPGPL
Sbjct: 181 VEKWNEQRENGCFPGPL 182

[Close]

BLAST of Pay0006516 vs. NCBI nr
Match: XP_008444857.1 (PREDICTED: cytochrome c oxidase subunit 6b-1-like [Cucumis melo] >KAA0065134.1 cytochrome c oxidase subunit 6b-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 361.3 bits (926), Expect = 5.1e-96
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA
Sbjct: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60

Query: 61  DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE 120
           DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE
Sbjct: 61  DQSSDNPPAEESPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLE 120

Query: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ 180
           TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ
Sbjct: 121 TAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQ 180

Query: 181 RENGTFPGPL 191
           RENGTFPGPL
Sbjct: 181 RENGTFPGPL 190

[Close]

BLAST of Pay0006516 vs. NCBI nr
Match: XP_004152624.1 (cytochrome c oxidase subunit 6b-1 [Cucumis sativus] >KGN62709.1 hypothetical protein Csa_022497 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 4.0e-85
Identity = 178/196 (90.82%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQS+QT SL+EQYSLKEKEEKVDIP PSEVKEVEN+ENAAPAEVVVKNDEPPVEA A
Sbjct: 1   MAEAQSQQTPSLSEQYSLKEKEEKVDIPQPSEVKEVENSENAAPAEVVVKNDEPPVEAVA 60

Query: 61  DQSSDNPPAEES------PAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQ 120
           DQSSD PPAEES       AVEDSET PAAENDSG AAEEESSGAGEEENSGDQESTDE+
Sbjct: 61  DQSSDIPPAEESNGDSSAAAVEDSETSPAAENDSG-AAEEESSGAGEEENSGDQESTDER 120

Query: 121 PEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWV 180
           PEIKLETAPVDFRFPTTNQTRHCFTRYIE+HRCTQAKGEGAPECEKFAKYYRSLCPSEWV
Sbjct: 121 PEIKLETAPVDFRFPTTNQTRHCFTRYIEFHRCTQAKGEGAPECEKFAKYYRSLCPSEWV 180

Query: 181 EKWNEQRENGTFPGPL 191
           EKWNEQRENGTFPGPL
Sbjct: 181 EKWNEQRENGTFPGPL 195

[Close]

BLAST of Pay0006516 vs. NCBI nr
Match: XP_038886001.1 (cytochrome c oxidase subunit 6b-1-like [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 170/197 (86.29%), Postives = 179/197 (90.86%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSE+T SLAEQYSLKEKEEKVDIP PSEVKEVEN+ENAA AEVVVKNDEPPVEA+A
Sbjct: 1   MAEAQSEKTPSLAEQYSLKEKEEKVDIPNPSEVKEVENSENAAHAEVVVKNDEPPVEAEA 60

Query: 61  DQSSDNPPAEE-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDE 120
           +Q SD+ PAEE       + AVEDSET PAAENDSG AA+EESSGAG EENSGDQESTDE
Sbjct: 61  NQGSDDSPAEENNGDAPAAAAVEDSETSPAAENDSG-AADEESSGAGGEENSGDQESTDE 120

Query: 121 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 180
           +PEIKLETAP DFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC+KFAKYYRSLCPSEW
Sbjct: 121 RPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPSEW 180

Query: 181 VEKWNEQRENGTFPGPL 191
           VEKWNEQRENGTFPGPL
Sbjct: 181 VEKWNEQRENGTFPGPL 196

[Close]

BLAST of Pay0006516 vs. NCBI nr
Match: XP_023547029.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 155/197 (78.68%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSE+  SL+EQYSLKEKEEKVDIP PSEVKEV+N+ENAAPAEVVVKNDEPPVEADA
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVKEVDNSENAAPAEVVVKNDEPPVEADA 60

Query: 61  DQSSDNPPAEE-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDE 120
           DQ SDN PA+E       + AVEDSET  A               AGEEE SGDQESTDE
Sbjct: 61  DQGSDNTPADENNGDASAAAAVEDSETNAA---------------AGEEEISGDQESTDE 120

Query: 121 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 180
           +PEIKLETAP DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPEC+KFAKYYRSLCP+EW
Sbjct: 121 RPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEW 180

Query: 181 VEKWNEQRENGTFPGPL 191
           VEKWNEQRENG FPGPL
Sbjct: 181 VEKWNEQRENGCFPGPL 182

[Close]

BLAST of Pay0006516 vs. NCBI nr
Match: KAG6598699.1 (Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 155/197 (78.68%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADA 60
           MAEAQSE+  SL+EQYSLKEKEEKVDIP PSEVKEVEN+ENA PAEVVVKNDEPPVEADA
Sbjct: 1   MAEAQSEKPPSLSEQYSLKEKEEKVDIPKPSEVKEVENSENADPAEVVVKNDEPPVEADA 60

Query: 61  DQSSDNPPAEE-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDE 120
           DQ S+NPPA+E       + AVEDSET  A               AGEEE SGDQESTDE
Sbjct: 61  DQGSNNPPADENNGDASAAAAVEDSETNAA---------------AGEEEISGDQESTDE 120

Query: 121 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 180
           +PEIKLETAP DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPEC+KFAKYYRSLCP+EW
Sbjct: 121 RPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEW 180

Query: 181 VEKWNEQRENGTFPGPL 191
           VEKWNEQRENG FPGPL
Sbjct: 181 VEKWNEQRENGCFPGPL 182

[Close]

BLAST of Pay0006516 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 168.7 bits (426), Expect = 4.5e-42
Identity = 115/202 (56.93%), Postives = 139/202 (68.81%), Query Frame = 0


Query: 1   MAEAQSEQTLSLAEQYSLKEKEEKVDIPL-PSEVKEVENAENAAPAEVVVKNDEPPVEAD 60
           MA+A + QT SL+EQY L EKE K D    P EVKEV      AP EV  + +E   E  
Sbjct: 1   MADAVNAQTPSLSEQYHL-EKEVKQDTSAKPVEVKEV------AP-EVTTQAEEVKTE-- 60

Query: 61  ADQSSDNPPAEESPAV--EDSETGPAA---ENDSGAAAE---EESSGAGEEEN--SGDQE 120
             Q+ +  P EE+ +V  E SE+ P +    +++ AAAE   EE+  A EE N  +  +E
Sbjct: 61  --QAKEESPVEEAVSVVEEKSESAPESTEVASEAPAAAEDNAEETPAAAEENNDENASEE 120

Query: 121 STDEQP-EIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSL 180
             +E P EIKLETAP DFRFPTTNQTRHCFTRY+EYHRC  AKG+ APEC+KFAK+YRSL
Sbjct: 121 VAEETPDEIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSL 180

Query: 181 CPSEWVEKWNEQRENGTFPGPL 191
           CPSEWV++WNEQRENGTFPGPL
Sbjct: 181 CPSEWVDRWNEQRENGTFPGPL 190

[Close]

BLAST of Pay0006516 vs. TAIR 10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.3e-36
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 114 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 173
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT AKGE A ECE+FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEW 61

Query: 174 VEKWNEQRENGTFPGPL 191
           V+KWNEQRE GTFPGPL
Sbjct: 62  VDKWNEQRETGTFPGPL 78

[Close]

BLAST of Pay0006516 vs. TAIR 10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.1e-35
Identity = 61/77 (79.22%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 114 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEW 173
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRCT AKGE + +CE+FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEW 61

Query: 174 VEKWNEQRENGTFPGPL 191
           V+KWNEQRE+GTFPGPL
Sbjct: 62  VDKWNEQRESGTFPGPL 78

[Close]

BLAST of Pay0006516 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.9e-12
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 122 APVDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEK-WNEQ 181
           A V+ RFP TN+TRHCF R+++YH+C +  G  A +C     Y RS+CP E V K W + 
Sbjct: 59  AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEELVSKIWLKS 118

Query: 182 REN 184
             N
Sbjct: 119 GRN 121

The following BLAST results are available for this feature:

BLAST of Pay0006516 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7L9	6.4e-41	56.93	Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=...	[more]
Q9SUD3	8.9e-35	81.82	Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=...	[more]
Q945L0	4.4e-34	79.22	Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=...	[more]
O94581	1.5e-21	53.57	Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (str...	[more]
Q01519	2.2e-17	46.15	Cytochrome c oxidase subunit 12, mitochondrial OS=Saccharomyces cerevisiae (stra...	[more]

BLAST of Pay0006516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCW9	2.5e-96	100.00	Cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BC78	2.5e-96	100.00	cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 P...	[more]
A0A0A0LNV6	2.0e-85	90.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1	[more]
A0A6J1KAZ5	8.5e-73	78.68	cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HH76	4.2e-72	77.66	cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Pay0006516 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444857.1	5.1e-96	100.00	PREDICTED: cytochrome c oxidase subunit 6b-1-like [Cucumis melo] >KAA0065134.1 c...	[more]
XP_004152624.1	4.0e-85	90.82	cytochrome c oxidase subunit 6b-1 [Cucumis sativus] >KGN62709.1 hypothetical pro...	[more]
XP_038886001.1	1.3e-80	86.29	cytochrome c oxidase subunit 6b-1-like [Benincasa hispida]	[more]
XP_023547029.1	1.0e-72	78.68	cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6598699.1	1.0e-72	78.68	Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0006516 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22450.1	4.5e-42	56.93	cytochrome C oxidase 6B	[more]
AT4G28060.1	6.3e-36	81.82	Cytochrome c oxidase, subunit Vib family protein	[more]
AT5G57815.1	3.1e-35	79.22	Cytochrome c oxidase, subunit Vib family protein	[more]
AT1G32710.1	2.9e-12	46.03	Cytochrome c oxidase, subunit Vib family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003213	Cytochrome c oxidase, subunit VIb	PFAM	PF02297	COX6B	coord: 127..186 e-value: 5.6E-17 score: 61.8
IPR003213	Cytochrome c oxidase, subunit VIb	CDD	cd00926	Cyt_c_Oxidase_VIb	coord: 115..189 e-value: 1.01038E-41 score: 133.202
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	GENE3D	1.10.10.140	Cytochrome c oxidase, subunit VIb	coord: 112..190 e-value: 7.8E-34 score: 117.4
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	SUPERFAMILY	47694	Cytochrome c oxidase subunit h	coord: 116..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..33
None	No IPR available	PANTHER	PTHR46281:SF14	CYTOCHROME C OXIDASE SUBUNIT 6B-1	coord: 7..190
None	No IPR available	PANTHER	PTHR46281	CYTOCHROME C OXIDASE SUBUNIT 6B	coord: 7..190
None	No IPR available	PROSITE	PS51808	CHCH	coord: 134..177 score: 13.526293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006516.1	Pay0006516.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045277	respiratory chain complex IV