Pay0006430 (gene) Melon (Payzawat) v1

Overview
NamePay0006430
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Locationchr08: 27948863 .. 27949408 (-)
RNA-Seq ExpressionPay0006430
SyntenyPay0006430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGTGATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA

mRNA sequence

ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGTGATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA

Coding sequence (CDS)

ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGTGATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA

Protein sequence

MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
Homology
BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5A7VHZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001360 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96
Identity = 170/181 (93.92%), Postives = 177/181 (97.79%), Query Frame = 0

Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC
Sbjct: 263 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 322

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 323 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 382

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 383 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 442

Query: 181 W 182
           W
Sbjct: 443 W 443

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 168/181 (92.82%), Postives = 174/181 (96.13%), Query Frame = 0

Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 375 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 434

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLS
Sbjct: 435 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 494

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 495 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 554

Query: 181 W 182
           W
Sbjct: 555 W 555

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5D3DEM4 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00450 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95
Identity = 168/181 (92.82%), Postives = 176/181 (97.24%), Query Frame = 0

Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGI VVLISPEGK+FPLTTKLCFEC
Sbjct: 120 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFEC 179

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 180 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 239

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 240 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 299

Query: 181 W 182
           W
Sbjct: 300 W 300

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.9e-94
Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0

Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 1216 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 1275

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1276 THNIAEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1335

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL +MFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1336 QNFEKISFDHVPREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1395

Query: 181  W 182
            W
Sbjct: 1396 W 1396

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.4e-94
Identity = 166/181 (91.71%), Postives = 172/181 (95.03%), Query Frame = 0

Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL H IGVVLISPEGKVFPLT KLCFEC
Sbjct: 1344 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFEC 1403

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1404 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1463

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1464 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1523

Query: 181  W 182
            W
Sbjct: 1524 W 1524

BLAST of Pay0006430 vs. NCBI nr
Match: KAA0067952.1 (uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 361.3 bits (926), Expect = 4.9e-96
Identity = 170/181 (93.92%), Postives = 177/181 (97.79%), Query Frame = 0

Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC
Sbjct: 263 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 322

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 323 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 382

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 383 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 442

Query: 181 W 182
           W
Sbjct: 443 W 443

BLAST of Pay0006430 vs. NCBI nr
Match: TYK24459.1 (uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 168/181 (92.82%), Postives = 174/181 (96.13%), Query Frame = 0

Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 375 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 434

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLS
Sbjct: 435 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 494

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 495 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 554

Query: 181 W 182
           W
Sbjct: 555 W 555

BLAST of Pay0006430 vs. NCBI nr
Match: TYK21789.1 (uncharacterized protein E5676_scaffold1721G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 357.1 bits (915), Expect = 9.2e-95
Identity = 168/181 (92.82%), Postives = 176/181 (97.24%), Query Frame = 0

Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGI VVLISPEGK+FPLTTKLCFEC
Sbjct: 120 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFEC 179

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 180 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 239

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 240 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 299

Query: 181 W 182
           W
Sbjct: 300 W 300

BLAST of Pay0006430 vs. NCBI nr
Match: KAA0046213.1 (uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0

Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 1216 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 1275

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1276 THNIAEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1335

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL +MFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1336 QNFEKISFDHVPREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1395

Query: 181  W 182
            W
Sbjct: 1396 W 1396

BLAST of Pay0006430 vs. NCBI nr
Match: KAA0037621.1 (uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 166/181 (91.71%), Postives = 172/181 (95.03%), Query Frame = 0

Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL H IGVVLISPEGKVFPLT KLCFEC
Sbjct: 1344 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFEC 1403

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1404 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1463

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1464 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1523

Query: 181  W 182
            W
Sbjct: 1524 W 1524

BLAST of Pay0006430 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-14
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 0

Query: 18  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQ 77
           + +++ T+ FDGAS  N  + G G VL + +  V     +     T+N+ EY A ++GL+
Sbjct: 150 RQNDSCTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLR 209

Query: 78  VACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPRED 137
            A D   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+ RE 
Sbjct: 210 SALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREK 269

Query: 138 NRMTEALATLVV 148
           N   +  A   +
Sbjct: 270 NSEADKQANSAI 281

BLAST of Pay0006430 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-14
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 0

Query: 18  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQ 77
           + +++ T+ FDGAS  N  + G G VL + +  V     +     T+N+ EY A ++GL+
Sbjct: 150 RQNDSCTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLR 209

Query: 78  VACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPRED 137
            A D   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+ RE 
Sbjct: 210 SALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREK 269

Query: 138 NRMTEALATLVV 148
           N   +  A   +
Sbjct: 270 NSEADKQANSAI 281

BLAST of Pay0006430 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 46/145 (31.72%), Postives = 63/145 (43.45%), Query Frame = 0

Query: 6   PDENIFLVEKNAK-DHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTH 65
           P E +  VE +A    ET  + FDGAS  N    G   VL + +G +     +     T+
Sbjct: 199 PLEKLSKVEPSAYISDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATN 258

Query: 66  NIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQN 125
           N  EY A I+GL+ A +   K +KV GDS LV  Q+K +W+     L    +    L   
Sbjct: 259 NAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNK 318

Query: 126 FEKISFDHVPREDNRMTEALATLVV 148
                  HV R  N   +  A L V
Sbjct: 319 CVSFEISHVLRNLNADADEQANLAV 343

BLAST of Pay0006430 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-07
Identity = 38/128 (29.69%), Postives = 56/128 (43.75%), Query Frame = 0

Query: 20  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVA 79
           +ET  + FDGAS  N    G   VL + +G +     +     T+N  EY   I+GL+ A
Sbjct: 183 YETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHA 242

Query: 80  CDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNR 139
            +    K+KV  DS LV  Q+K +W+     L    +   +LS         HV R  N 
Sbjct: 243 IEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNS 302

Query: 140 MTEALATL 146
             +  A +
Sbjct: 303 DADEQANM 310

BLAST of Pay0006430 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-07
Identity = 38/128 (29.69%), Postives = 56/128 (43.75%), Query Frame = 0

Query: 20  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVA 79
           +ET  + FDGAS  N    G   VL + +G +     +     T+N  EY   I+GL+ A
Sbjct: 183 YETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHA 242

Query: 80  CDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNR 139
            +    K+KV  DS LV  Q+K +W+     L    +   +LS         HV R  N 
Sbjct: 243 IEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNS 302

Query: 140 MTEALATL 146
             +  A +
Sbjct: 303 DADEQANM 310

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VHZ02.4e-9693.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DMD21.2e-9592.82Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160... [more]
A0A5D3DEM44.4e-9592.82RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TRL74.9e-9491.16Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010... [more]
A0A5A7T7R46.4e-9491.71Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282... [more]
Match NameE-valueIdentityDescription
KAA0067952.14.9e-9693.92uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa][more]
TYK24459.12.4e-9592.82uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa][more]
TYK21789.19.2e-9592.82uncharacterized protein E5676_scaffold1721G00450 [Cucumis melo var. makuwa][more]
KAA0046213.11.0e-9391.16uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa][more]
KAA0037621.11.3e-9391.71uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT3G01410.13.8e-1431.82Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT3G01410.23.8e-1431.82Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT1G24090.11.7e-0931.72RNase H family protein [more]
AT5G51080.15.9e-0729.69RNase H family protein [more]
AT5G51080.25.9e-0729.69RNase H family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 27..144
e-value: 3.5E-22
score: 78.5
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 19..148
score: 11.508777
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 24..154
e-value: 1.3E-30
score: 108.1
NoneNo IPR availablePANTHERPTHR24559:SF322RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEINcoord: 2..159
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 2..159
NoneNo IPR availableCDDcd09279RNase_HI_likecoord: 23..145
e-value: 6.65776E-44
score: 140.3
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 21..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0006430.1Pay0006430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component GO:0030430 host cell cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0003676 nucleic acid binding