Pay0006430 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006430
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr08: 27948863 .. 27949408 (-)
RNA-Seq Expression	Pay0006430
Synteny	Pay0006430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGTGATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA

mRNA sequence

ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGTGATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA

Coding sequence (CDS)

ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGGGATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGACTTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTACCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGTGATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA

Protein sequence

MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

Homology

[Close]

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5A7VHZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001360 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96
Identity = 170/181 (93.92%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC
Sbjct: 263 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 322

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 323 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 382

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 383 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 442

Query: 181 W 182
           W
Sbjct: 443 W 443

[Close]

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5D3DMD2 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 168/181 (92.82%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 375 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 434

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLS
Sbjct: 435 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 494

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 495 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 554

Query: 181 W 182
           W
Sbjct: 555 W 555

[Close]

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5D3DEM4 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00450 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95
Identity = 168/181 (92.82%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGI VVLISPEGK+FPLTTKLCFEC
Sbjct: 120 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFEC 179

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 180 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 239

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 240 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 299

Query: 181 W 182
           W
Sbjct: 300 W 300

[Close]

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.9e-94
Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 1216 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 1275

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1276 THNIAEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1335

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL +MFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1336 QNFEKISFDHVPREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1395

Query: 181  W 182
            W
Sbjct: 1396 W 1396

[Close]

BLAST of Pay0006430 vs. ExPASy TrEMBL
Match: A0A5A7T7R4 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002820 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.4e-94
Identity = 166/181 (91.71%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL H IGVVLISPEGKVFPLT KLCFEC
Sbjct: 1344 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFEC 1403

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1404 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1463

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1464 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1523

Query: 181  W 182
            W
Sbjct: 1524 W 1524

[Close]

BLAST of Pay0006430 vs. NCBI nr
Match: KAA0067952.1 (uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 361.3 bits (926), Expect = 4.9e-96
Identity = 170/181 (93.92%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC
Sbjct: 263 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 322

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 323 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 382

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 383 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 442

Query: 181 W 182
           W
Sbjct: 443 W 443

[Close]

BLAST of Pay0006430 vs. NCBI nr
Match: TYK24459.1 (uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 168/181 (92.82%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 375 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 434

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPY QYVTKLS
Sbjct: 435 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYSQYVTKLS 494

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 495 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 554

Query: 181 W 182
           W
Sbjct: 555 W 555

[Close]

BLAST of Pay0006430 vs. NCBI nr
Match: TYK21789.1 (uncharacterized protein E5676_scaffold1721G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 357.1 bits (915), Expect = 9.2e-95
Identity = 168/181 (92.82%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 1   MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
           MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGI VVLISPEGK+FPLTTKLCFEC
Sbjct: 120 MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIRVVLISPEGKLFPLTTKLCFEC 179

Query: 61  THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
           THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS
Sbjct: 180 THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 239

Query: 121 QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
           QNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 240 QNFEKISFNHVLKEDNQMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 299

Query: 181 W 182
           W
Sbjct: 300 W 300

[Close]

BLAST of Pay0006430 vs. NCBI nr
Match: KAA0046213.1 (uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFEC
Sbjct: 1216 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHGIGVVLISPEGKVFPLTAKLCFEC 1275

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1276 THNIAEYEACIMGLRVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1335

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL +MFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1336 QNFEKISFDHVPREDNRMADALATLAMMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1395

Query: 181  W 182
            W
Sbjct: 1396 W 1396

[Close]

BLAST of Pay0006430 vs. NCBI nr
Match: KAA0037621.1 (uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 166/181 (91.71%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 1    MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFEC 60
            MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL H IGVVLISPEGKVFPLT KLCFEC
Sbjct: 1344 MRIDFPDDNIFLVEKNARDHETWTMLFDGASNELGHEIGVVLISPEGKVFPLTAKLCFEC 1403

Query: 61   THNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLS 120
            THNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETR AKLVPY QYVTKLS
Sbjct: 1404 THNIAEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRHAKLVPYSQYVTKLS 1463

Query: 121  QNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKP 180
            QNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKP
Sbjct: 1464 QNFEKISFDHVPREDNRMADALATLAVMFDLNLEFELHPIQITKRDVPAYCMNVGNDNKP 1523

Query: 181  W 182
            W
Sbjct: 1524 W 1524

[Close]

BLAST of Pay0006430 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-14
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 18  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQ 77
           + +++ T+ FDGAS  N  + G G VL + +  V     +     T+N+ EY A ++GL+
Sbjct: 150 RQNDSCTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLR 209

Query: 78  VACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPRED 137
            A D   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+ RE 
Sbjct: 210 SALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREK 269

Query: 138 NRMTEALATLVV 148
           N   +  A   +
Sbjct: 270 NSEADKQANSAI 281

[Close]

BLAST of Pay0006430 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-14
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 18  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQ 77
           + +++ T+ FDGAS  N  + G G VL + +  V     +     T+N+ EY A ++GL+
Sbjct: 150 RQNDSCTIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLR 209

Query: 78  VACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPRED 137
            A D   K + VLGDSMLV  QV+  W+T   K+    +   +L  +F+     H+ RE 
Sbjct: 210 SALDKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREK 269

Query: 138 NRMTEALATLVV 148
           N   +  A   +
Sbjct: 270 NSEADKQANSAI 281

[Close]

BLAST of Pay0006430 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-09
Identity = 46/145 (31.72%), Postives = 63/145 (43.45%), Query Frame = 0


Query: 6   PDENIFLVEKNAK-DHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTH 65
           P E +  VE +A    ET  + FDGAS  N    G   VL + +G +     +     T+
Sbjct: 199 PLEKLSKVEPSAYISDETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATN 258

Query: 66  NIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQN 125
           N  EY A I+GL+ A +   K +KV GDS LV  Q+K +W+     L    +    L   
Sbjct: 259 NAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNK 318

Query: 126 FEKISFDHVPREDNRMTEALATLVV 148
                  HV R  N   +  A L V
Sbjct: 319 CVSFEISHVLRNLNADADEQANLAV 343

[Close]

BLAST of Pay0006430 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-07
Identity = 38/128 (29.69%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 20  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVA 79
           +ET  + FDGAS  N    G   VL + +G +     +     T+N  EY   I+GL+ A
Sbjct: 183 YETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHA 242

Query: 80  CDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNR 139
            +    K+KV  DS LV  Q+K +W+     L    +   +LS         HV R  N 
Sbjct: 243 IEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNS 302

Query: 140 MTEALATL 146
             +  A +
Sbjct: 303 DADEQANM 310

[Close]

BLAST of Pay0006430 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-07
Identity = 38/128 (29.69%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 20  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVA 79
           +ET  + FDGAS  N    G   VL + +G +     +     T+N  EY   I+GL+ A
Sbjct: 183 YETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHA 242

Query: 80  CDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNR 139
            +    K+KV  DS LV  Q+K +W+     L    +   +LS         HV R  N 
Sbjct: 243 IEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNS 302

Query: 140 MTEALATL 146
             +  A +
Sbjct: 303 DADEQANM 310

The following BLAST results are available for this feature:

BLAST of Pay0006430 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0006430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHZ0	2.4e-96	93.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DMD2	1.2e-95	92.82	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00160...	[more]
A0A5D3DEM4	4.4e-95	92.82	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TRL7	4.9e-94	91.16	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010...	[more]
A0A5A7T7R4	6.4e-94	91.71	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00282...	[more]

BLAST of Pay0006430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067952.1	4.9e-96	93.92	uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa]	[more]
TYK24459.1	2.4e-95	92.82	uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa]	[more]
TYK21789.1	9.2e-95	92.82	uncharacterized protein E5676_scaffold1721G00450 [Cucumis melo var. makuwa]	[more]
KAA0046213.1	1.0e-93	91.16	uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]	[more]
KAA0037621.1	1.3e-93	91.71	uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0006430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01410.1	3.8e-14	31.82	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	3.8e-14	31.82	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	1.7e-09	31.72	RNase H family protein	[more]
AT5G51080.1	5.9e-07	29.69	RNase H family protein	[more]
AT5G51080.2	5.9e-07	29.69	RNase H family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 27..144 e-value: 3.5E-22 score: 78.5
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 19..148 score: 11.508777
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 24..154 e-value: 1.3E-30 score: 108.1
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 2..159
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..159
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 23..145 e-value: 6.65776E-44 score: 140.3
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 21..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006430.1	Pay0006430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding