Pay0006404 (gene) Melon (Payzawat) v1

Overview
NamePay0006404
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description40S ribosomal protein S16
Locationchr01: 446174 .. 448221 (-)
RNA-Seq ExpressionPay0006404
SyntenyPay0006404
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTCCGATTGAGTCGGTTCAATGTTTCGGCCGGAAAAAGACGGCAGTGGCAGTCACCTACTGCAAGCGCGGTAGAGGTTTGATTAAGATCAATGGCTGCCCAATCGAACTCGTGGAGCCGGAGATCCTCCGTTTCAAGGCTTATGAGCCTATCCTCCTCCTTGGACGACACAGGTTCTCTGGTGTCGATATGCGTATTAGAGTAAAGGGTGGAGGTCACACCTCGCAGATTTACGCCATCCGTCAGAGTATCGCCAAGGCCTTGGTCGCGTTCTACCAGAAGTACGTGGACGAGCAGAGCAAGAAGGAAATCAAAGACATTCTTGTCAGGTACGACAGGACTTTACTCGTCGCCGATCCCCGACGCTGTGAGCCCAAGAAGTTTGGTGGTCGTGGAGCTCGTGCCAGGTTCCAGAAATCTTACCGTTGAATCGTTTATCCATTTTGGAAAAGACTTTGTGGTGCTGGATTTTTGCTGCTTTTCTTCTTTTATGCGTTTGAATTTACAAGGTTGTTTTTTGTGTTTAACTGTTCTATCTATTTGCTCATAAAATTAGATTTTTTGTCCTAATGGTTTTGACTCTTTTGCTATTATATTACTCGTTATCGGAATACTGTTAGTTAATTGGAAGCCTCGTTTTAGAATAGCATTATGAATTCATGGCATTGCTTTTCTTTCGAAGCTCTGCTATTTCTCATTGTTCTAATTCGCATTTCGTCTTTTTTTTTTTGGCAATTATAAGTGTTAGGTGATGAAGTTCTTGATTAAGCTGTTAGTTTTAGTTGGAAAACTCTTGAGTGTGTTATTTCATGGCACGTCTCTGTTTCATTGATTATACAACCATTGTGCCTGATCGATACTTCTGTTTCAAAATTCATCCTTTTGCATATGTACTTGGTTATCGCTTCGTTCTTTTTGTGCTGGGTCATTTAGATCTCACGAGTTAAACTTGAATGCTTCTTTCATCCATGTGTACTCATTATTCAATGGTTTCTTTCCCCATTGTAATTCTTATTCTGTAGCTCTCATTGGGTGTAACTGTATATAGATTTAGAAACTATGGGGTTTGAAATTGAATTAAATTTTGTAATTTGAATTCCATTGCCTGTCCTGAACCCTGAAAATCGTTAAAACTTGTCAATTACGCAATAATAACATGTTTTCTAGTAACATAGAGATGGCAATTAATGTCATATAATATTAACCATTAATCATGGGGGTTAGTTTGAAAATTCTTCATTGAAGACATGCTCTGCTTGTCAATCAAATGAATTGCATTCTACTTGTTCGTATCTATGAGCACGAGGTCCACTACAATACTTTTGTTCTATGTAATATAGAATTTCAATTAAACCCAATCAATTCTGTTGGCTGTTCTCAATTAAATTGTTTAATTTTCACTAAAAATGTTGATTTTGAGTCTTTGTATTGTGCTTTTGGTCTCTGGTTTGTCCCTTTGAGCTTTCATGTGCATTAGCTTATTTTTTTTTATTTGAAAAAAAATTATAATTAGTTGATGTGTATTTTATCTTAATTTGAATTTTATGTTTAATTCCAATTGGATATGTCAAATTTAAGAAATCTCAAATAGTATTTTTTACAGCATTGAAGCTTTGGAGATACTTTTAGGGACTCATATTTAAACATGTCCTTCACAAATGTTTTCCATTTAGTGGAGATGTCCAAATAAATCTTAAACATCTTATTTCACGTTATTTTATTTAATTTTACATGATATAGAAGTGGCTCAACTGTATCAAATTCACAAGGTGTACATATTTTTGTGTGTATACACCTTTTTGTTTCTTTTTTTCCAGAAGGTAATAATAATTGGATACAAGAGTAAGGGCGAAATTCAATTTATCCCTCTAAATGAGTTGCATAGTTTAAACTCTAAACTCCTAAATTATACCTTGATTTTTCACAAATATATCAATTTAAGCTCTTAATTTTGGGTTTAATTGATAAAGTCATTGGTCAAATTTAGAAAACAATAATTTTTTTTTTTTTTTTTAGTTTTCAAATTTTGGTTTTGTTTTTGA

mRNA sequence

ATGGCTGCTCCGATTGAGTCGGTTCAATGTTTCGGCCGGAAAAAGACGGCAGTGGCAGTCACCTACTGCAAGCGCGGTAGAGGTTTGATTAAGATCAATGGCTGCCCAATCGAACTCGTGGAGCCGGAGATCCTCCGTTTCAAGGCTTATGAGCCTATCCTCCTCCTTGGACGACACAGGTTCTCTGGTGTCGATATGCGTATTAGAGTAAAGGGTGGAGGTCACACCTCGCAGATTTACGCCATCCGTCAGAGTATCGCCAAGGCCTTGGTCGCGTTCTACCAGAAGTACGTGGACGAGCAGAGCAAGAAGGAAATCAAAGACATTCTTGTCAGGTACGACAGGACTTTACTCGTCGCCGATCCCCGACGCTGTGAGCCCAAGAAGTTTGTTTTCAAATTTTGGTTTTGTTTTTGA

Coding sequence (CDS)

ATGGCTGCTCCGATTGAGTCGGTTCAATGTTTCGGCCGGAAAAAGACGGCAGTGGCAGTCACCTACTGCAAGCGCGGTAGAGGTTTGATTAAGATCAATGGCTGCCCAATCGAACTCGTGGAGCCGGAGATCCTCCGTTTCAAGGCTTATGAGCCTATCCTCCTCCTTGGACGACACAGGTTCTCTGGTGTCGATATGCGTATTAGAGTAAAGGGTGGAGGTCACACCTCGCAGATTTACGCCATCCGTCAGAGTATCGCCAAGGCCTTGGTCGCGTTCTACCAGAAGTACGTGGACGAGCAGAGCAAGAAGGAAATCAAAGACATTCTTGTCAGGTACGACAGGACTTTACTCGTCGCCGATCCCCGACGCTGTGAGCCCAAGAAGTTTGTTTTCAAATTTTGGTTTTGTTTTTGA

Protein sequence

MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFVFKFWFCF
Homology
[Close]
BLAST of Pay0006404 vs. ExPASy Swiss-Prot
Match: P46293 (40S ribosomal protein S16 OS=Gossypium hirsutum OX=3635 GN=RPS16 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 3.9e-64
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0 

Query: 5   IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGV 64
           IESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF+GV
Sbjct: 6   IESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGV 65

Query: 65  DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 124
           DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILV YDRTLLVADPRR
Sbjct: 66  DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVGYDRTLLVADPRR 125

Query: 125 CEPKKF 131
           CEPKKF
Sbjct: 126 CEPKKF 131

[Close]
BLAST of Pay0006404 vs. ExPASy Swiss-Prot
Match: Q9SK22 (40S ribosomal protein S16-1 OS=Arabidopsis thaliana OX=3702 GN=RPS16A PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-61
Identity = 112/125 (89.60%), Postives = 121/125 (96.80%), Query Frame = 0 

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKF 131
           EPKKF
Sbjct: 128 EPKKF 132

[Close]
BLAST of Pay0006404 vs. ExPASy Swiss-Prot
Match: Q42340 (40S ribosomal protein S16-3 OS=Arabidopsis thaliana OX=3702 GN=RPS16C PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.4e-61
Identity = 111/125 (88.80%), Postives = 121/125 (96.80%), Query Frame = 0 

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKF 131
           EPKKF
Sbjct: 128 EPKKF 132

[Close]
BLAST of Pay0006404 vs. ExPASy Swiss-Prot
Match: O22647 (40S ribosomal protein S16 OS=Fritillaria agrestis OX=64177 GN=RPS16 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.0e-61
Identity = 115/131 (87.79%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 1   MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRH 60
           MA P  ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRH
Sbjct: 1   MATPATESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRH 60

Query: 61  RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLV 120
           RF GVDMRIRV+GGG TSQIYAIRQSIAKALVA+YQKYVDEQ+KKE+KDIL+RYDRTLLV
Sbjct: 61  RFVGVDMRIRVRGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEVKDILMRYDRTLLV 120

Query: 121 ADPRRCEPKKF 131
           ADPRRCEPKKF
Sbjct: 121 ADPRRCEPKKF 131

[Close]
BLAST of Pay0006404 vs. ExPASy Swiss-Prot
Match: Q9XEK7 (40S ribosomal protein S16 OS=Syntrichia ruralis OX=38588 GN=RPS16 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.2e-58
Identity = 109/128 (85.16%), Postives = 123/128 (96.09%), Query Frame = 0 

Query: 3   APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFS 62
           A +ESVQCFGRKKTAVAVTYC+RGRGLI++   PIELVEPEILR+KA+EP+LLLGR +F+
Sbjct: 2   AAVESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKFA 61

Query: 63  GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADP 122
           GVDMRIRVKGGG+TSQIYAIRQSIAKALVA++QKYVDEQSKKEIKD+L+RYDRTLLVADP
Sbjct: 62  GVDMRIRVKGGGNTSQIYAIRQSIAKALVAYFQKYVDEQSKKEIKDVLLRYDRTLLVADP 121

Query: 123 RRCEPKKF 131
           RRCEPKKF
Sbjct: 122 RRCEPKKF 128

[Close]
BLAST of Pay0006404 vs. ExPASy TrEMBL
Match: A0A6J1J781 (40S ribosomal protein S16-like OS=Cucurbita maxima OX=3661 GN=LOC111481879 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. ExPASy TrEMBL
Match: A0A0A0L6F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G202730 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. ExPASy TrEMBL
Match: A0A1S3C210 (40S ribosomal protein S16 OS=Cucumis melo OX=3656 GN=LOC103496134 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. ExPASy TrEMBL
Match: A0A6J1D637 (40S ribosomal protein S16 OS=Momordica charantia OX=3673 GN=LOC111017623 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. ExPASy TrEMBL
Match: A0A6J1FW85 (40S ribosomal protein S16-like OS=Cucurbita moschata OX=3662 GN=LOC111447898 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. NCBI nr
Match: KAE8645860.1 (hypothetical protein Csa_017052 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 4.7e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 50  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 109

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 110 FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 169

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 170 DPRRCEPKKF 179

[Close]
BLAST of Pay0006404 vs. NCBI nr
Match: XP_004136973.1 (40S ribosomal protein S16 [Cucumis sativus] >XP_004140706.1 40S ribosomal protein S16 [Cucumis sativus] >XP_004149967.1 40S ribosomal protein S16 [Cucumis sativus] >XP_008454961.1 PREDICTED: 40S ribosomal protein S16 [Cucumis melo] >XP_008456099.1 PREDICTED: 40S ribosomal protein S16 [Cucumis melo] >XP_008456141.1 PREDICTED: 40S ribosomal protein S16 [Cucumis melo] >XP_022136342.1 40S ribosomal protein S16 [Momordica charantia] >XP_022149129.1 40S ribosomal protein S16 [Momordica charantia] >XP_022927908.1 40S ribosomal protein S16-like [Cucurbita moschata] >XP_022943042.1 40S ribosomal protein S16-like [Cucurbita moschata] >XP_022943043.1 40S ribosomal protein S16-like [Cucurbita moschata] >XP_022952362.1 40S ribosomal protein S16-like [Cucurbita moschata] >XP_022972375.1 40S ribosomal protein S16-like [Cucurbita maxima] >XP_022983243.1 40S ribosomal protein S16-like [Cucurbita maxima] >XP_023535994.1 40S ribosomal protein S16-like [Cucurbita pepo subsp. pepo] >XP_023553863.1 40S ribosomal protein S16-like [Cucurbita pepo subsp. pepo] >XP_038877987.1 40S ribosomal protein S16 [Benincasa hispida] >XP_038880326.1 40S ribosomal protein S16 [Benincasa hispida] >XP_038886975.1 40S ribosomal protein S16 [Benincasa hispida] >KAA0031306.1 40S ribosomal protein S16 [Cucumis melo var. makuwa] >KAG6571970.1 40S ribosomal protein S16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011649.1 40S ribosomal protein S16, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAA0037136.1 40S ribosomal protein S16 [Cucumis melo var. makuwa] >KAA0039084.1 40S ribosomal protein S16 [Cucumis melo var. makuwa])

HSP 1 Score: 264.6 bits (675), Expect = 4.7e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. NCBI nr
Match: XP_022149351.1 (40S ribosomal protein S16-like [Momordica charantia])

HSP 1 Score: 264.2 bits (674), Expect = 6.2e-67
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEL+EPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. NCBI nr
Match: XP_022989000.1 (40S ribosomal protein S16-like [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MA+PIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MASPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. NCBI nr
Match: XP_040987369.1 (40S ribosomal protein S16 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 128/130 (98.46%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
           MAAP+ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120
           F+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 121 DPRRCEPKKF 131
           DPRRCEPKKF
Sbjct: 121 DPRRCEPKKF 130

[Close]
BLAST of Pay0006404 vs. TAIR 10
Match: AT2G09990.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 112/125 (89.60%), Postives = 121/125 (96.80%), Query Frame = 0 

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKF 131
           EPKKF
Sbjct: 128 EPKKF 132

[Close]
BLAST of Pay0006404 vs. TAIR 10
Match: AT5G18380.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-62
Identity = 111/125 (88.80%), Postives = 121/125 (96.80%), Query Frame = 0 

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKF 131
           EPKKF
Sbjct: 128 EPKKF 132

[Close]
BLAST of Pay0006404 vs. TAIR 10
Match: AT5G18380.2 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-60
Identity = 112/134 (83.58%), Postives = 125/134 (93.28%), Query Frame = 0 

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 126 EPKKFVFKFW-FCF 139
           E    +F+F+ FCF
Sbjct: 128 E----LFRFYNFCF 137

[Close]
BLAST of Pay0006404 vs. TAIR 10
Match: AT3G04230.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-58
Identity = 105/125 (84.00%), Postives = 117/125 (93.60%), Query Frame = 0 

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVD
Sbjct: 8   ESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVD 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 125
           MRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKEIKDIL+RYDRTLLVADPRRC
Sbjct: 68  MRIRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRRC 127

Query: 126 EPKKF 131
           E KKF
Sbjct: 128 ESKKF 132

[Close]
BLAST of Pay0006404 vs. TAIR 10
Match: AT5G18380.3 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 5.0e-51
Identity = 93/108 (86.11%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 6   ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 65
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 66  MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRY 114
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVR+
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRF 115

The following BLAST results are available for this feature:
BLAST of Pay0006404 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P462933.9e-6496.0340S ribosomal protein S16 OS=Gossypium hirsutum OX=3635 GN=RPS16 PE=2 SV=1[more]
Q9SK221.8e-6189.6040S ribosomal protein S16-1 OS=Arabidopsis thaliana OX=3702 GN=RPS16A PE=2 SV=1[more]
Q423402.4e-6188.8040S ribosomal protein S16-3 OS=Arabidopsis thaliana OX=3702 GN=RPS16C PE=2 SV=1[more]
O226474.0e-6187.7940S ribosomal protein S16 OS=Fritillaria agrestis OX=64177 GN=RPS16 PE=2 SV=1[more]
Q9XEK73.2e-5885.1640S ribosomal protein S16 OS=Syntrichia ruralis OX=38588 GN=RPS16 PE=2 SV=1[more]
BLAST of Pay0006404 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J7812.3e-67100.0040S ribosomal protein S16-like OS=Cucurbita maxima OX=3661 GN=LOC111481879 PE=3 ... [more]
A0A0A0L6F62.3e-67100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G202730 PE=3 SV=1[more]
A0A1S3C2102.3e-67100.0040S ribosomal protein S16 OS=Cucumis melo OX=3656 GN=LOC103496134 PE=3 SV=1[more]
A0A6J1D6372.3e-67100.0040S ribosomal protein S16 OS=Momordica charantia OX=3673 GN=LOC111017623 PE=3 SV... [more]
A0A6J1FW852.3e-67100.0040S ribosomal protein S16-like OS=Cucurbita moschata OX=3662 GN=LOC111447898 PE=... [more]
BLAST of Pay0006404 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645860.14.7e-67100.00hypothetical protein Csa_017052 [Cucumis sativus][more]
XP_004136973.14.7e-67100.0040S ribosomal protein S16 [Cucumis sativus] >XP_004140706.1 40S ribosomal protei... [more]
XP_022149351.16.2e-6799.2340S ribosomal protein S16-like [Momordica charantia][more]
XP_022989000.11.1e-6699.2340S ribosomal protein S16-like [Cucurbita maxima][more]
XP_040987369.11.4e-6698.4640S ribosomal protein S16 [Juglans microcarpa x Juglans regia][more]
BLAST of Pay0006404 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G09990.11.3e-6289.60Ribosomal protein S5 domain 2-like superfamily protein [more]
AT5G18380.11.7e-6288.80Ribosomal protein S5 domain 2-like superfamily protein [more]
AT5G18380.21.2e-6083.58Ribosomal protein S5 domain 2-like superfamily protein [more]
AT3G04230.11.1e-5884.00Ribosomal protein S5 domain 2-like superfamily protein [more]
AT5G18380.35.0e-5186.11Ribosomal protein S5 domain 2-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 2..133
e-value: 8.1E-47
score: 161.0
IPR000754Ribosomal protein S9PFAMPF00380Ribosomal_S9coord: 12..130
e-value: 1.1E-24
score: 87.3
IPR000754Ribosomal protein S9PANTHERPTHR21569RIBOSOMAL PROTEIN S9coord: 3..130
NoneNo IPR availablePANTHERPTHR21569:SF28SUBFAMILY NOT NAMEDcoord: 3..130
IPR020574Ribosomal protein S9, conserved sitePROSITEPS00360RIBOSOMAL_S9coord: 72..90
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 7..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0006404.1Pay0006404.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0032259 methylation
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0042409 caffeoyl-CoA O-methyltransferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome