Pay0006393 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006393
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Location	chr06: 23668082 .. 23668972 (-)
RNA-Seq Expression	Pay0006393
Synteny	Pay0006393

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCATCCCATTGGTGGATGAGCAAATTGAAACTAGGATTGTTCCAGTAGAGATCCAAAAAGTTATGAATGAATATGTTGATGGAATGCCTCATGAACTGCCAAAGTCACTACCTCCTCGACGAGGGATTGATCACGAGATTGAGCTTGTACCAAAAGCCAAACCCCCAGCAAAGAACGCTTACAGAATGGCTCCACATGAGCTAGCTGAGCTCAGAAAACAGTTAGATGAGTTGTTAGCTGCTAGATTCATCAGACCTGCCAAAAGTACCCAATGGGGCCTTTGTGTTGTTTCAGAAAAAAAATTGGACATTTCGTTTGTGTATAGATTATAAAGCATTAACAAAGTTATAGTTCAAAATAGGTATCCTCTCCCGATCGTAAATGATTTGTTTGACCAGTTGAATGGGACTCAGTACTTCACGAAGCTCGATCTCAGGTCAGGCTATTATCAGGTTCAAATAGCACAAGGGGATGAACCAAAGACTACTTGTGTAACAAGATTTGGAGCCTTTGAGTTCCTCGTAATGCTCTTTGGCTTGATAAATGCCTCTGCAACCTTTTTTACCTAGATGAACCAGGTATTCCACGAGTATCTAGACTAGTTTATGGTGATTTATCTTGATGATATTGTGGTTTTTAGTTCAAGTCTTGAAGAACACCAAGTCTATCTTCAATCAGTTTTTGACAAAAACCGACATAATCATTTATATATGAAGAAAGAGAAGCGTGTTTTTGCTAAACAGCATATCAACTTTCTGGATCACATCATTGAATGCGAAAAGATTCAAATGGACGAAGATAAGCTGCAGGCTATTAAGGAGTGGGAAGCCCCTACTTCCCTGACAGAGTTACGTTCCTTCCTTGGATTGGCTAATTATTATCGTTAG

mRNA sequence

ATGGTCATCCCATTGGTGGATGAGCAAATTGAAACTAGGATTGTTCCAGTAGAGATCCAAAAAGTTATGAATGAATATGTTGATGGAATGCCTCATGAACTGCCAAAGTCACTACCTCCTCGACGAGGGATTGATCACGAGATTGAGCTTGTACCAAAAGCCAAACCCCCAGCAAAGAACGCTTACAGAATGGCTCCACATGAGCTAGCTGAGCTCAGAAAACAGTTAGATGAGTTGTTAGCTGCTAGATTCATCAGACCTGCCAAAAGTACCCAATGGGGCCTTTGTGTTGTTTCAGAAAAAAAATTGGACATTTCTTCAAGTCTTGAAGAACACCAAGTCTATCTTCAATCAGTTTTTGACAAAAACCGACATAATCATTTATATATGAAGAAAGAGAAGCGTGTTTTTGCTAAACAGCATATCAACTTTCTGGATCACATCATTGAATGCGAAAAGATTCAAATGGACGAAGATAAGCTGCAGGCTATTAAGGAGTGGGAAGCCCCTACTTCCCTGACAGAGTTACGTTCCTTCCTTGGATTGGCTAATTATTATCGTTAG

Coding sequence (CDS)

ATGGTCATCCCATTGGTGGATGAGCAAATTGAAACTAGGATTGTTCCAGTAGAGATCCAAAAAGTTATGAATGAATATGTTGATGGAATGCCTCATGAACTGCCAAAGTCACTACCTCCTCGACGAGGGATTGATCACGAGATTGAGCTTGTACCAAAAGCCAAACCCCCAGCAAAGAACGCTTACAGAATGGCTCCACATGAGCTAGCTGAGCTCAGAAAACAGTTAGATGAGTTGTTAGCTGCTAGATTCATCAGACCTGCCAAAAGTACCCAATGGGGCCTTTGTGTTGTTTCAGAAAAAAAATTGGACATTTCTTCAAGTCTTGAAGAACACCAAGTCTATCTTCAATCAGTTTTTGACAAAAACCGACATAATCATTTATATATGAAGAAAGAGAAGCGTGTTTTTGCTAAACAGCATATCAACTTTCTGGATCACATCATTGAATGCGAAAAGATTCAAATGGACGAAGATAAGCTGCAGGCTATTAAGGAGTGGGAAGCCCCTACTTCCCTGACAGAGTTACGTTCCTTCCTTGGATTGGCTAATTATTATCGTTAG

Protein sequence

MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLDISSSLEEHQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYYR

Homology

[Close]

BLAST of Pay0006393 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 46  HEIELVPKAK-------PPAKNAYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVV 105
           H+I + PK +       P  K  Y + P  L          +A  F R  +       V 
Sbjct: 692 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF-RDLRFVN----VY 751

Query: 106 SEKKLDISSSLEEHQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDE 165
            +  L  S S EEH  +L +V ++ ++ +L +KK+K  FA +   FL + I  +KI   +
Sbjct: 752 LDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQ 811

Query: 166 DKLQAIKEWEAPTSLTELRSFLGLANYYR 188
            K  AI+++  P ++ + + FLG+ NYYR
Sbjct: 812 HKCAAIRDFPTPKTVKQAQRFLGMINYYR 835

[Close]

BLAST of Pay0006393 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 46  HEIELVPKAK-------PPAKNAYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVV 105
           H+I + PK +       P  K  Y + P  L          +A  F R  +       V 
Sbjct: 718 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF-RDLRFVN----VY 777

Query: 106 SEKKLDISSSLEEHQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDE 165
            +  L  S S EEH  +L +V ++ ++ +L +KK+K  FA +   FL + I  +KI   +
Sbjct: 778 LDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQ 837

Query: 166 DKLQAIKEWEAPTSLTELRSFLGLANYYR 188
            K  AI+++  P ++ + + FLG+ NYYR
Sbjct: 838 HKCAAIRDFPTPKTVKQAQRFLGMINYYR 861

[Close]

BLAST of Pay0006393 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.2e-05
Identity = 28/82 (34.15%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 106 SSSLEEHQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIK 165
           S   + H   L+ V       +L +  EK  F    + FL +I+  + I+ D  K++AI 
Sbjct: 288 SEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAIS 347

Query: 166 EWEAPTSLTELRSFLGLANYYR 188
           E   PTS+ EL+ FLG+ +YYR
Sbjct: 348 EMPPPTSVKELKRFLGMTSYYR 369

[Close]

BLAST of Pay0006393 vs. ExPASy Swiss-Prot
Match: Q09575 (Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.5e-05
Identity = 29/92 (31.52%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 94  GLCVVSEKKLDISSSLEEHQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEK 153
           G+ V  +  +  +SS+EEH+  L+ +F++ +     +  EK  FA++ + FL  + E  +
Sbjct: 589 GVAVYWDDIIISASSIEEHEKILRELFERFKEYGFRVSAEKCAFAQKQVTFLGFVDEHGR 648

Query: 154 IQMDEDKLQAIKEWEAPTSLTELRSFLGLANY 186
            + D  K +AI+  +APT   +L SFLG A++
Sbjct: 649 -RPDSKKTEAIRSMKAPTDQKQLASFLGAADW 679

[Close]

BLAST of Pay0006393 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 25/82 (30.49%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 106 SSSLEEHQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIK 165
           S +  +H  ++ +V       ++ + +EK  F K+ + +L  I+  +  + D +K++AI+
Sbjct: 347 SENESDHVRHIDTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQ 406

Query: 166 EWEAPTSLTELRSFLGLANYYR 188
           E+  P  + ++RSFLGLA+YYR
Sbjct: 407 EYPEPDCVYKVRSFLGLASYYR 428

[Close]

BLAST of Pay0006393 vs. ExPASy TrEMBL
Match: A0A1S4DXY2 (uncharacterized protein LOC107991048 OS=Cucumis melo OX=3656 GN=LOC107991048 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 8.1e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60
           MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN
Sbjct: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60

Query: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLDISSSLEEHQVYLQSVF 120
           AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLDISSSLEEHQVYLQSVF
Sbjct: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLDISSSLEEHQVYLQSVF 120

Query: 121 DKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFL 180
           DKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFL
Sbjct: 121 DKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFL 180

Query: 181 GLANYYR 188
           GLANYYR
Sbjct: 181 GLANYYR 187

[Close]

BLAST of Pay0006393 vs. ExPASy TrEMBL
Match: A0A5A7V3M6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001670 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.5e-77
Identity = 153/176 (86.93%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 23  MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 82
           MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA
Sbjct: 1   MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 60

Query: 83  RFIRPAK-STQWGLCVVSE-----------KKLDISSSLEEHQVYLQSVFDKNRHNHLYM 142
           RFIRPAK   ++ L +V++            KLD+SSSLEEHQVYLQSVFDKNRHNHLYM
Sbjct: 61  RFIRPAKIQNRYPLPIVNDLFDQLNGTQYFTKLDLSSSLEEHQVYLQSVFDKNRHNHLYM 120

Query: 143 KKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 187
           KKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY
Sbjct: 121 KKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 176

[Close]

BLAST of Pay0006393 vs. ExPASy TrEMBL
Match: A0A5D3DFE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001060 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.1e-59
Identity = 132/180 (73.33%), Postives = 140/180 (77.78%), Query Frame = 0


Query: 23  MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 82
           MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA
Sbjct: 1   MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 60

Query: 83  RFIRPAK-STQWGLCVVSE-----------KKLDISSSLEEHQVYLQSVFDK----NRHN 142
           RFIRPAK   ++ L +V++            KLD+ S   + Q+  Q    K     R  
Sbjct: 61  RFIRPAKIQNRYPLPIVNDLFDQLNGTQYFTKLDLKSGYYQVQI-AQGDEPKTTCVTRFG 120

Query: 143 HLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 187
                KEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY
Sbjct: 121 AFEFLKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 179

[Close]

BLAST of Pay0006393 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.9e-47
Identity = 117/256 (45.70%), Postives = 148/256 (57.81%), Query Frame = 0


Query: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60
           M IP+ + +    +VP EIQ+V+  Y D MP  LPK+LPPR GIDHEIEL+P AKPPAKN
Sbjct: 571 MAIPVAEGRNSEELVPREIQRVLEAYADVMPDNLPKNLPPRPGIDHEIELLPGAKPPAKN 630

Query: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLD---------------- 120
           AYRMAP ELAELRKQLDELL A FIRPAK+  +G  V+ +KK D                
Sbjct: 631 AYRMAPPELAELRKQLDELLNAGFIRPAKA-PYGAPVLFQKKKDXSLRLCIDYRALNKLX 690

Query: 121 -----------------------------------------------------ISSSLEE 180
                                                                 S ++EE
Sbjct: 691 VRNKXPLPIITDLFDQLHGAKYFSKLDLRSGYYQVFHEYLDKFVVVYLDDIVVYSPTMEE 750

Query: 181 HQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPT 188
           HQV+LQ VF+K + N LY+K+EK  FA++ I+FL H+IEC +I M++ K++AI+EW+ PT
Sbjct: 751 HQVHLQLVFEKLKQNQLYVKREKCSFAQERISFLGHVIECGRIGMEDGKVKAIQEWKIPT 810

[Close]

BLAST of Pay0006393 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 8.8e-46
Identity = 126/298 (42.28%), Postives = 150/298 (50.34%), Query Frame = 0


Query: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60
           M IP+V++ +ETR VP EIQ VM EYVD MP  LPK+LPPRRGIDHEIEL+P AKPPAKN
Sbjct: 600 MAIPMVEQPVETRDVPPEIQVVMKEYVDIMPDSLPKTLPPRRGIDHEIELIPGAKPPAKN 659

Query: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLD---------------- 120
           AYRMAP ELAELRKQLDELL A FIRPAK+  +G  V+ +KK D                
Sbjct: 660 AYRMAPPELAELRKQLDELLNAGFIRPAKA-PFGAPVLFQKKKDGTLRLCIDYRALNKVT 719

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 720 VRNKYPLPIITDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMX 779

Query: 181 -----------------------------------ISSSLEEHQVYLQSVFDKNRHNHLY 188
                                               S +L+EHQ++L+ VFDK R N LY
Sbjct: 780 FGLTNAPATFCTMMNQVFHEYLDQFVVVYLDDIVVYSPTLKEHQIHLRLVFDKLRQNQLY 839

[Close]

BLAST of Pay0006393 vs. NCBI nr
Match: XP_016900833.1 (PREDICTED: uncharacterized protein LOC107991048 [Cucumis melo])

HSP 1 Score: 372.9 bits (956), Expect = 1.7e-99
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60
           MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN
Sbjct: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60

Query: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLDISSSLEEHQVYLQSVF 120
           AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLDISSSLEEHQVYLQSVF
Sbjct: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLDISSSLEEHQVYLQSVF 120

Query: 121 DKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFL 180
           DKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFL
Sbjct: 121 DKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFL 180

Query: 181 GLANYYR 188
           GLANYYR
Sbjct: 181 GLANYYR 187

[Close]

BLAST of Pay0006393 vs. NCBI nr
Match: KAA0060369.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 5.2e-77
Identity = 153/176 (86.93%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 23  MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 82
           MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA
Sbjct: 1   MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 60

Query: 83  RFIRPAK-STQWGLCVVSE-----------KKLDISSSLEEHQVYLQSVFDKNRHNHLYM 142
           RFIRPAK   ++ L +V++            KLD+SSSLEEHQVYLQSVFDKNRHNHLYM
Sbjct: 61  RFIRPAKIQNRYPLPIVNDLFDQLNGTQYFTKLDLSSSLEEHQVYLQSVFDKNRHNHLYM 120

Query: 143 KKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 187
           KKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY
Sbjct: 121 KKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 176

[Close]

BLAST of Pay0006393 vs. NCBI nr
Match: TYK22110.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 8.4e-59
Identity = 132/180 (73.33%), Postives = 140/180 (77.78%), Query Frame = 0


Query: 23  MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 82
           MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA
Sbjct: 1   MNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKNAYRMAPHELAELRKQLDELLAA 60

Query: 83  RFIRPAK-STQWGLCVVSE-----------KKLDISSSLEEHQVYLQSVFDK----NRHN 142
           RFIRPAK   ++ L +V++            KLD+ S   + Q+  Q    K     R  
Sbjct: 61  RFIRPAKIQNRYPLPIVNDLFDQLNGTQYFTKLDLKSGYYQVQI-AQGDEPKTTCVTRFG 120

Query: 143 HLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 187
                KEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY
Sbjct: 121 AFEFLKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPTSLTELRSFLGLANYY 179

[Close]

BLAST of Pay0006393 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 117/256 (45.70%), Postives = 148/256 (57.81%), Query Frame = 0


Query: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60
           M IP+ + +    +VP EIQ+V+  Y D MP  LPK+LPPR GIDHEIEL+P AKPPAKN
Sbjct: 571 MAIPVAEGRNSEELVPREIQRVLEAYADVMPDNLPKNLPPRPGIDHEIELLPGAKPPAKN 630

Query: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLD---------------- 120
           AYRMAP ELAELRKQLDELL A FIRPAK+  +G  V+ +KK D                
Sbjct: 631 AYRMAPPELAELRKQLDELLNAGFIRPAKA-PYGAPVLFQKKKDXSLRLCIDYRALNKLX 690

Query: 121 -----------------------------------------------------ISSSLEE 180
                                                                 S ++EE
Sbjct: 691 VRNKXPLPIITDLFDQLHGAKYFSKLDLRSGYYQVFHEYLDKFVVVYLDDIVVYSPTMEE 750

Query: 181 HQVYLQSVFDKNRHNHLYMKKEKRVFAKQHINFLDHIIECEKIQMDEDKLQAIKEWEAPT 188
           HQV+LQ VF+K + N LY+K+EK  FA++ I+FL H+IEC +I M++ K++AI+EW+ PT
Sbjct: 751 HQVHLQLVFEKLKQNQLYVKREKCSFAQERISFLGHVIECGRIGMEDGKVKAIQEWKIPT 810

[Close]

BLAST of Pay0006393 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-45
Identity = 126/298 (42.28%), Postives = 150/298 (50.34%), Query Frame = 0


Query: 1   MVIPLVDEQIETRIVPVEIQKVMNEYVDGMPHELPKSLPPRRGIDHEIELVPKAKPPAKN 60
           M IP+V++ +ETR VP EIQ VM EYVD MP  LPK+LPPRRGIDHEIEL+P AKPPAKN
Sbjct: 600 MAIPMVEQPVETRDVPPEIQVVMKEYVDIMPDSLPKTLPPRRGIDHEIELIPGAKPPAKN 659

Query: 61  AYRMAPHELAELRKQLDELLAARFIRPAKSTQWGLCVVSEKKLD---------------- 120
           AYRMAP ELAELRKQLDELL A FIRPAK+  +G  V+ +KK D                
Sbjct: 660 AYRMAPPELAELRKQLDELLNAGFIRPAKA-PFGAPVLFQKKKDGTLRLCIDYRALNKVT 719

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 720 VRNKYPLPIITDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMX 779

Query: 181 -----------------------------------ISSSLEEHQVYLQSVFDKNRHNHLY 188
                                               S +L+EHQ++L+ VFDK R N LY
Sbjct: 780 FGLTNAPATFCTMMNQVFHEYLDQFVVVYLDDIVVYSPTLKEHQIHLRLVFDKLRQNQLY 839

The following BLAST results are available for this feature:

BLAST of Pay0006393 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	2.0e-07	28.86	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.0e-07	28.86	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	4.2e-05	34.15	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q09575	5.5e-05	31.52	Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=...	[more]
P10401	1.6e-04	30.49	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]

BLAST of Pay0006393 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DXY2	8.1e-100	100.00	uncharacterized protein LOC107991048 OS=Cucumis melo OX=3656 GN=LOC107991048 PE=...	[more]
A0A5A7V3M6	2.5e-77	86.93	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DFE2	4.1e-59	73.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold31...	[more]
A0A6J1DLQ6	7.9e-47	45.70	uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D906	8.8e-46	42.28	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]

BLAST of Pay0006393 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900833.1	1.7e-99	100.00	PREDICTED: uncharacterized protein LOC107991048 [Cucumis melo]	[more]
KAA0060369.1	5.2e-77	86.93	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK22110.1	8.4e-59	73.33	reverse transcriptase [Cucumis melo var. makuwa]	[more]
XP_022155185.1	1.6e-46	45.70	uncharacterized protein LOC111022320 [Momordica charantia]	[more]
XP_022150099.1	1.8e-45	42.28	uncharacterized protein LOC111018360 [Momordica charantia]	[more]

BLAST of Pay0006393 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 107..149 e-value: 2.3E-5 score: 25.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 158..187 e-value: 2.2E-8 score: 36.0
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 39..106 e-value: 5.0E-10 score: 41.2
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 20..120
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 20..120
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 43..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006393.1	Pay0006393.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003676	nucleic acid binding