Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTCTCTATATTCATTAGAGAATTTCTGCAACCTTCAGAATCCTAAATAAAAAAATAACTTCTTCTGTTTTTGCATTTTTCTTCTTCTTTGTTCTCTAATTCTCTCTTTTCAATTCAATTTCCCCATCTCAAATCCCCAACAATGGCCCGTCAATTCATTCTCCTTGCCCTTCTCTTCTCCGCCGCCGTCATTGGCATTGTCTCTGCCGCCGAAGCCCCCGCCGCCTCCCCTGCCTCCTCCCCCGCCTCCTCCCCTAAGGCCGCTGACCTTGAACCCTCCGATGATGGAAAAACTCCCGCAGCTGCTCCTTCCAAGGCTCCTGCCGCCGCCGCTGACGCCCCGATCGCCGTCACTCCTTCCGCCGCAGGTGCTCCCAAAGGAGCTGCTTCAGCCCCTGCAGCTAAGGGTGGAGCCCCTGAAGCTGACAGCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGCTGGAGCCCCTGCATCCGATGCCGAAGTGTCATCTCCACCTTCCCCAACTGGACCGGCTGCCGGACCTGCAAGCGATGCCGCTGCTGATGCGCCAGCTGATTCACCCGCAGATTCTCCGGCGCCCAGTGGTGGTTCTTTGGTGAAAGTGTCGGTTGCGGCCGTTGCTGGGATTTCGGGTGTTGTTGGGTTGTTTGTGTTCTAAGATTGTTACTTTTTTAAAATTGAATGAGATTAATGAGATGGGTTTAATTTGAATTGTATTCGAAGAGAGATTAATGGTTCTTTTATTTTATTATTATAAGTATTTGGTGATTCTCTGAGAATACAGAAGAGGGATGATCATATGATCATTTTTTTAAAAAAAAAATTTATTTTCCTAATTCTTCACTCTTTCATCCTTGTTCTTG
mRNA sequence
TCTTTCTCTATATTCATTAGAGAATTTCTGCAACCTTCAGAATCCTAAATAAAAAAATAACTTCTTCTGTTTTTGCATTTTTCTTCTTCTTTGTTCTCTAATTCTCTCTTTTCAATTCAATTTCCCCATCTCAAATCCCCAACAATGGCCCGTCAATTCATTCTCCTTGCCCTTCTCTTCTCCGCCGCCGTCATTGGCATTGTCTCTGCCGCCGAAGCCCCCGCCGCCTCCCCTGCCTCCTCCCCCGCCTCCTCCCCTAAGGCCGCTGACCTTGAACCCTCCGATGATGGAAAAACTCCCGCAGCTGCTCCTTCCAAGGCTCCTGCCGCCGCCGCTGACGCCCCGATCGCCGTCACTCCTTCCGCCGCAGGTGCTCCCAAAGGAGCTGCTTCAGCCCCTGCAGCTAAGGGTGGAGCCCCTGAAGCTGACAGCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGCTGGAGCCCCTGCATCCGATGCCGAAGTGTCATCTCCACCTTCCCCAACTGGACCGGCTGCCGGACCTGCAAGCGATGCCGCTGCTGATGCGCCAGCTGATTCACCCGCAGATTCTCCGGCGCCCAGTGGTGGTTCTTTGGTGAAAGTGTCGGTTGCGGCCGTTGCTGGGATTTCGGGTGTTGTTGGGTTGTTTGTGTTCTAAGATTGTTACTTTTTTAAAATTGAATGAGATTAATGAGATGGGTTTAATTTGAATTGTATTCGAAGAGAGATTAATGGTTCTTTTATTTTATTATTATAAGTATTTGGTGATTCTCTGAGAATACAGAAGAGGGATGATCATATGATCATTTTTTTAAAAAAAAAATTTATTTTCCTAATTCTTCACTCTTTCATCCTTGTTCTTG
Coding sequence (CDS)
ATGGCCCGTCAATTCATTCTCCTTGCCCTTCTCTTCTCCGCCGCCGTCATTGGCATTGTCTCTGCCGCCGAAGCCCCCGCCGCCTCCCCTGCCTCCTCCCCCGCCTCCTCCCCTAAGGCCGCTGACCTTGAACCCTCCGATGATGGAAAAACTCCCGCAGCTGCTCCTTCCAAGGCTCCTGCCGCCGCCGCTGACGCCCCGATCGCCGTCACTCCTTCCGCCGCAGGTGCTCCCAAAGGAGCTGCTTCAGCCCCTGCAGCTAAGGGTGGAGCCCCTGAAGCTGACAGCCCTGTTGCCGGTGGCCCTGCTTCTTCCCCTGCTGGCGATGAGTCTTCTTCCACTGTGGCCCCTGCTGGAGCCCCTGCTGGAGCCCCTGCATCCGATGCCGAAGTGTCATCTCCACCTTCCCCAACTGGACCGGCTGCCGGACCTGCAAGCGATGCCGCTGCTGATGCGCCAGCTGATTCACCCGCAGATTCTCCGGCGCCCAGTGGTGGTTCTTTGGTGAAAGTGTCGGTTGCGGCCGTTGCTGGGATTTCGGGTGTTGTTGGGTTGTTTGTGTTCTAA
Protein sequence
MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF
Homology
BLAST of Pay0006389 vs. ExPASy TrEMBL
Match:
A0A1S3CA92 (skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1)
HSP 1 Score: 293.9 bits (751), Expect = 4.8e-76
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP
Sbjct: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
Query: 61 AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA
Sbjct: 61 AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
Query: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGIS 180
PAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGIS
Sbjct: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGIS 180
Query: 181 GVVGLFVF 189
GVVGLFVF
Sbjct: 181 GVVGLFVF 188
BLAST of Pay0006389 vs. ExPASy TrEMBL
Match:
A0A5D3CDS4 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00550 PE=4 SV=1)
HSP 1 Score: 234.2 bits (596), Expect = 4.5e-58
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
Query: 39 KAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 98
+AADLEPSDDGKTPAAAPSKAPAAA DAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV
Sbjct: 3 QAADLEPSDDGKTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 62
Query: 99 AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA 158
AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA
Sbjct: 63 AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA 122
Query: 159 DSPAPSGGSLVKVSVAAVAGISGVVGLFVF 189
DSPAPSGGSLVKVSVAAVAGISGVVGLFVF
Sbjct: 123 DSPAPSGGSLVKVSVAAVAGISGVVGLFVF 152
BLAST of Pay0006389 vs. ExPASy TrEMBL
Match:
A0A0A0KUB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 2.9e-49
Identity = 139/169 (82.25%), Postives = 148/169 (87.57%), Query Frame = 0
Query: 27 AASPASSPASSPKAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPA 86
A+SPASSPASSPKAAD+EPSD KTPAAAPSK+PAAAADAPIA TPSAAGAPKGAASAP+
Sbjct: 84 ASSPASSPASSPKAADVEPSDGAKTPAAAPSKSPAAAADAPIAATPSAAGAPKGAASAPS 143
Query: 87 AKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPAS 146
AK GAPEAD+PVAGGPASSPAGDESSSTVAPAGAP +A+VSSPPSPTGPAAGP S
Sbjct: 144 AKAGAPEADTPVAGGPASSPAGDESSSTVAPAGAP------EADVSSPPSPTGPAAGPTS 203
Query: 147 DAAADAPADSPADSPA-------PSGGSLVKVSVAAVAGISGVVGLFVF 189
DA ADAPADS ADSPA +GGSLVKVSVAAVAGISG+VGLFVF
Sbjct: 204 DAVADAPADSSADSPADTPSDSPANGGSLVKVSVAAVAGISGIVGLFVF 246
BLAST of Pay0006389 vs. ExPASy TrEMBL
Match:
A0A5A7T636 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002770 PE=4 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 81 AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 140
AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP
Sbjct: 4 AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 63
Query: 141 AAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF 189
AAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF
Sbjct: 64 AAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF 111
BLAST of Pay0006389 vs. ExPASy TrEMBL
Match:
A0A6J1BWF7 (brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17
Identity = 104/206 (50.49%), Postives = 135/206 (65.53%), Query Frame = 0
Query: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
MARQ ++LALLF AAV+G+VSAA+AP+ +PA++P+ S + + + S K+PA+AP+ AP
Sbjct: 1 MARQLVVLALLF-AAVVGVVSAAKAPSTAPAAAPSKS-NSTEAKDSPASKSPASAPAAAP 60
Query: 61 ----------AAAADAPIAVTPSAAGAPKGAASAPAAKG-GAPEADSPVAGGPASSPAGD 120
AA +DAP + TP AA APKGAAS+PAA +A+S AG PASSPA D
Sbjct: 61 SKSNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGTKAESAPAGSPASSPAAD 120
Query: 121 ESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAA-GPASDAAADAPA------DSPADSPA 180
+S +PA +P A+VSSPPSP+GPAA A+DA ADAPA D+P D+PA
Sbjct: 121 GPASDESPAASP-----DAADVSSPPSPSGPAADSDAADADADAPAAGGPAGDAPTDAPA 180
Query: 181 PSGGSLVKVSVAAVAGISGVVGLFVF 189
SG S VK S AA+AG+ V G F F
Sbjct: 181 -SGASFVKASAAAIAGVCAVAGFFAF 197
BLAST of Pay0006389 vs. NCBI nr
Match:
XP_008458926.1 (PREDICTED: skin secretory protein xP2 [Cucumis melo])
HSP 1 Score: 293.9 bits (751), Expect = 9.9e-76
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP
Sbjct: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
Query: 61 AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA
Sbjct: 61 AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
Query: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGIS 180
PAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGIS
Sbjct: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGIS 180
Query: 181 GVVGLFVF 189
GVVGLFVF
Sbjct: 181 GVVGLFVF 188
BLAST of Pay0006389 vs. NCBI nr
Match:
XP_031741751.1 (lysine-rich arabinogalactan protein 17 [Cucumis sativus])
HSP 1 Score: 236.1 bits (601), Expect = 2.4e-58
Identity = 163/199 (81.91%), Postives = 173/199 (86.93%), Query Frame = 0
Query: 1 MARQFILLALLFSAAVIGIVSAAEA----PAASPASSPASSPKAADLEPSDDGKTPAAAP 60
MARQF LLALLFSAAV+GIVSAAEA PA+SPASSPASSPKAAD+EPSD KTPAAAP
Sbjct: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
Query: 61 SKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVA 120
SK+PAAAADAPIA TPSAAGAPKGAASAP+AK GAPEAD+PVAGGPASSPAGDESSSTVA
Sbjct: 61 SKSPAAAADAPIAATPSAAGAPKGAASAPSAKAGAPEADTPVAGGPASSPAGDESSSTVA 120
Query: 121 PAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPADSPA-------PSGGSLV 180
PAGAP +A+VSSPPSPTGPAAGP SDA ADAPADS ADSPA +GGSLV
Sbjct: 121 PAGAP------EADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLV 180
Query: 181 KVSVAAVAGISGVVGLFVF 189
KVSVAAVAGISG+VGLFVF
Sbjct: 181 KVSVAAVAGISGIVGLFVF 193
BLAST of Pay0006389 vs. NCBI nr
Match:
TYK09358.1 (skin secretory protein xP2 [Cucumis melo var. makuwa])
HSP 1 Score: 234.2 bits (596), Expect = 9.3e-58
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
Query: 39 KAADLEPSDDGKTPAAAPSKAPAAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 98
+AADLEPSDDGKTPAAAPSKAPAAA DAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV
Sbjct: 3 QAADLEPSDDGKTPAAAPSKAPAAAVDAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPV 62
Query: 99 AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA 158
AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA
Sbjct: 63 AGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSPA 122
Query: 159 DSPAPSGGSLVKVSVAAVAGISGVVGLFVF 189
DSPAPSGGSLVKVSVAAVAGISGVVGLFVF
Sbjct: 123 DSPAPSGGSLVKVSVAAVAGISGVVGLFVF 152
BLAST of Pay0006389 vs. NCBI nr
Match:
KAA0037616.1 (skin secretory protein xP2 [Cucumis melo var. makuwa])
HSP 1 Score: 171.8 bits (434), Expect = 5.7e-39
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 81 AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 140
AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP
Sbjct: 4 AASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGP 63
Query: 141 AAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF 189
AAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF
Sbjct: 64 AAGPASDAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF 111
BLAST of Pay0006389 vs. NCBI nr
Match:
XP_038889219.1 (classical arabinogalactan protein 11 [Benincasa hispida])
HSP 1 Score: 168.7 bits (426), Expect = 4.8e-38
Identity = 135/194 (69.59%), Postives = 147/194 (75.77%), Query Frame = 0
Query: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
MARQ +LLALLF+ AV+GIVSAAEAP ASPASSPA+ A SD KTPAAAPSK+P
Sbjct: 1 MARQLVLLALLFT-AVVGIVSAAEAPTASPASSPAADDHAV----SDAEKTPAAAPSKSP 60
Query: 61 AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
AAA APIA TPSAAGAP+GAAS+P A EA+SP AGGPAS PAGDESSS +
Sbjct: 61 AAATTAPIAATPSAAGAPEGAASSPQA-----EAESPAAGGPASGPAGDESSS-----DS 120
Query: 121 PAGAPASDAEVSSPPSPTGPAAGPA------SDAAADAPADSPADSPAPSGGSLVKVSVA 180
PAGAP SDA+VSSPPSPTGPAAGPA +AAADAPADSP D A SGGS +KVSVA
Sbjct: 121 PAGAPESDADVSSPPSPTGPAAGPADGPASDGEAAADAPADSPTD--AASGGSFLKVSVA 177
Query: 181 AVAGISGVVGLFVF 189
AVAGIS V G F F
Sbjct: 181 AVAGISAVAGFFAF 177
BLAST of Pay0006389 vs. TAIR 10
Match:
AT5G14380.1 (arabinogalactan protein 6 )
HSP 1 Score: 42.4 bits (98), Expect = 4.8e-04
Identity = 74/189 (39.15%), Postives = 96/189 (50.79%), Query Frame = 0
Query: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
MARQF++L LL I AA+AP+ASP SP +P AAP+KAP
Sbjct: 1 MARQFVVLVLL--TLTIATAFAADAPSASPKKSP----------------SPTAAPTKAP 60
Query: 61 AAAADAPIAVTPSAAGAPKGAASAPAAKGGAPEADSPVAGGPASSPAGDESSSTVAPAGA 120
A AP A T + A APK ++++ +P+A SP A GP P D S+S+ + +
Sbjct: 61 TATTKAPSAPTKAPAAAPKSSSAS------SPKASSPAAEGPV--PEDDYSASSPSDS-- 120
Query: 121 PAGAPASDAEVSSPPSPTGPAAGPASDAAADAPADSP-ADSPAPSGGSLVKVSVAAVAGI 180
A AP VSSPP+PT P S +AAD P+D P A+SP + K S V G
Sbjct: 121 -AEAPT----VSSPPAPT-----PDSTSAADGPSDGPTAESPKSGAVTTAKFS---VVGT 148
Query: 181 SGVVGLFVF 189
VG F F
Sbjct: 181 VATVGFFFF 148
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CA92 | 4.8e-76 | 100.00 | skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1 | [more] |
A0A5D3CDS4 | 4.5e-58 | 98.67 | Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
A0A0A0KUB8 | 2.9e-49 | 82.25 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1 | [more] |
A0A5A7T636 | 2.7e-39 | 100.00 | Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... | [more] |
A0A6J1BWF7 | 1.0e-17 | 50.49 | brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
AT5G14380.1 | 4.8e-04 | 39.15 | arabinogalactan protein 6 | [more] |