Pay0006344 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006344
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr04: 16680403 .. 16680990 (-)
RNA-Seq Expression	Pay0006344
Synteny	Pay0006344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAATGCTGCAGCAAATGGATTGACAGAAGCATTCAACAAAACTTTGTGCAGTCTGCTTAAAAAAGTGGTCTCCAAGACAAAAAGAGATTGGCAAGAAAAGATTGGGGAAGCATTGTGGGCCTACAAAACTACCCATCGTACTTCTACGGGTGTTACACCTTATTCCTTAGTTTATGGTGTTGAAGCAGTACTCCCACTAGAAAGAAAAATTCCTTCCTTAAGAATGGCGATTCAAGAAGGGCTAACTACTGAAGACAATGCTAGATTATGCCTTCAAGAGTTAAAAGCACTTGACGAAAAGAGACTGGAAGCTCAACAAGCACTCGAATATTATCAAGCAAGAATGTCAAAAGCCTTTGACAAACAGGTAAGGCCCCGACCATTTCAAGTTGGTGATTTAGTGCTCGCAGTAAGAAGACCTATTATCACGACAAGGCATACGGGAAATAAGTTCACACCTAAATGGGACGGACCCTACATTGTCAAAGAAGTTTTCACGAATGGAGCATACAAAATCACCGATCAAGACGGATTACGTATTGGCCCAATCAACGGCAAATTTCTCAAGAAGTTTTATGCCTAA

mRNA sequence

ATGTACAATGCTGCAGCAAATGGATTGACAGAAGCATTCAACAAAACTTTGTGCAGTCTGCTTAAAAAAGTGGTCTCCAAGACAAAAAGAGATTGGCAAGAAAAGATTGGGGAAGCATTGTGGGCCTACAAAACTACCCATCGTACTTCTACGGGTGTTACACCTTATTCCTTAGTTTATGGTGTTGAAGCAGTACTCCCACTAGAAAGAAAAATTCCTTCCTTAAGAATGGCGATTCAAGAAGGGCTAACTACTGAAGACAATGCTAGATTATGCCTTCAAGAGTTAAAAGCACTTGACGAAAAGAGACTGGAAGCTCAACAAGCACTCGAATATTATCAAGCAAGAATGTCAAAAGCCTTTGACAAACAGGTAAGGCCCCGACCATTTCAAGTTGGTGATTTAGTGCTCGCAGTAAGAAGACCTATTATCACGACAAGGCATACGGGAAATAAGTTCACACCTAAATGGGACGGACCCTACATTGTCAAAGAAGTTTTCACGAATGGAGCATACAAAATCACCGATCAAGACGGATTACGTATTGGCCCAATCAACGGCAAATTTCTCAAGAAGTTTTATGCCTAA

Coding sequence (CDS)

ATGTACAATGCTGCAGCAAATGGATTGACAGAAGCATTCAACAAAACTTTGTGCAGTCTGCTTAAAAAAGTGGTCTCCAAGACAAAAAGAGATTGGCAAGAAAAGATTGGGGAAGCATTGTGGGCCTACAAAACTACCCATCGTACTTCTACGGGTGTTACACCTTATTCCTTAGTTTATGGTGTTGAAGCAGTACTCCCACTAGAAAGAAAAATTCCTTCCTTAAGAATGGCGATTCAAGAAGGGCTAACTACTGAAGACAATGCTAGATTATGCCTTCAAGAGTTAAAAGCACTTGACGAAAAGAGACTGGAAGCTCAACAAGCACTCGAATATTATCAAGCAAGAATGTCAAAAGCCTTTGACAAACAGGTAAGGCCCCGACCATTTCAAGTTGGTGATTTAGTGCTCGCAGTAAGAAGACCTATTATCACGACAAGGCATACGGGAAATAAGTTCACACCTAAATGGGACGGACCCTACATTGTCAAAGAAGTTTTCACGAATGGAGCATACAAAATCACCGATCAAGACGGATTACGTATTGGCCCAATCAACGGCAAATTTCTCAAGAAGTTTTATGCCTAA

Protein sequence

MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVYGVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKAFDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGLRIGPINGKFLKKFYA

Homology

[Close]

BLAST of Pay0006344 vs. ExPASy TrEMBL
Match: A0A5D3BTY1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00630 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.8e-100
Identity = 184/195 (94.36%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1    MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
            MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 1548 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 1607

Query: 61   GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
            GVEAVLPLE++IPSLRM+IQEGLTT+DNARLCLQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 1608 GVEAVLPLEKEIPSLRMSIQEGLTTKDNARLCLQELEALDEKRLEAQQALECYQARMSKA 1667

Query: 121  FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
            FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 1668 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 1727

Query: 181  RIGPINGKFLKKFYA 196
            RIGPINGKFLKKFYA
Sbjct: 1728 RIGPINGKFLKKFYA 1742

[Close]

BLAST of Pay0006344 vs. ExPASy TrEMBL
Match: A0A5A7UZS6 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004880 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.8e-100
Identity = 184/195 (94.36%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
           MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 443 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 502

Query: 61  GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
           GVEAVLPLE++IPSLRM+IQEGLTT+DNARLCLQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 503 GVEAVLPLEKEIPSLRMSIQEGLTTKDNARLCLQELEALDEKRLEAQQALECYQARMSKA 562

Query: 121 FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
           FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 563 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 622

Query: 181 RIGPINGKFLKKFYA 196
           RIGPINGKFLKKFYA
Sbjct: 623 RIGPINGKFLKKFYA 637

[Close]

BLAST of Pay0006344 vs. ExPASy TrEMBL
Match: A0A5A7V3K3 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001490 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.1e-99
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1   MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
           MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVT YSLVY
Sbjct: 696 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTSYSLVY 755

Query: 61  GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
           GVEAVLPLER+IPSLRMAIQEGLTTEDNARL LQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 756 GVEAVLPLEREIPSLRMAIQEGLTTEDNARLHLQELEALDEKRLEAQQALECYQARMSKA 815

Query: 121 FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
           FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL
Sbjct: 816 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 875

Query: 181 RIGPINGKFLKKFYA 196
           RIGPINGKFLKKFYA
Sbjct: 876 RIGPINGKFLKKFYA 890

[Close]

BLAST of Pay0006344 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 185/195 (94.87%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1    MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
            MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 2124 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 2183

Query: 61   GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
            GVEAVLPLER+IPSLRMAIQEGLTTEDNARL LQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 2184 GVEAVLPLEREIPSLRMAIQEGLTTEDNARLRLQELEALDEKRLEAQQALECYQARMSKA 2243

Query: 121  FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
            FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 2244 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 2303

Query: 181  RIGPINGKFLKKFYA 196
            +IGPINGKFLKKFYA
Sbjct: 2304 QIGPINGKFLKKFYA 2318

[Close]

BLAST of Pay0006344 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.2e-99
Identity = 184/195 (94.36%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1    MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
            MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 2194 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 2253

Query: 61   GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
            GVEAVLPLER+IPSLRMAIQEGLTTEDNARL L+EL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 2254 GVEAVLPLEREIPSLRMAIQEGLTTEDNARLRLEELEALDEKRLEAQQALECYQARMSKA 2313

Query: 121  FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
            FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 2314 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 2373

Query: 181  RIGPINGKFLKKFYA 196
            RIGPING+FLKKFYA
Sbjct: 2374 RIGPINGRFLKKFYA 2388

[Close]

BLAST of Pay0006344 vs. NCBI nr
Match: TYK02262.1 (uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 374.0 bits (959), Expect = 7.8e-100
Identity = 184/195 (94.36%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1    MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
            MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 1548 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 1607

Query: 61   GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
            GVEAVLPLE++IPSLRM+IQEGLTT+DNARLCLQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 1608 GVEAVLPLEKEIPSLRMSIQEGLTTKDNARLCLQELEALDEKRLEAQQALECYQARMSKA 1667

Query: 121  FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
            FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 1668 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 1727

Query: 181  RIGPINGKFLKKFYA 196
            RIGPINGKFLKKFYA
Sbjct: 1728 RIGPINGKFLKKFYA 1742

[Close]

BLAST of Pay0006344 vs. NCBI nr
Match: KAA0060610.1 (uncharacterized protein E6C27_scaffold22G004880 [Cucumis melo var. makuwa])

HSP 1 Score: 374.0 bits (959), Expect = 7.8e-100
Identity = 184/195 (94.36%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
           MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 443 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 502

Query: 61  GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
           GVEAVLPLE++IPSLRM+IQEGLTT+DNARLCLQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 503 GVEAVLPLEKEIPSLRMSIQEGLTTKDNARLCLQELEALDEKRLEAQQALECYQARMSKA 562

Query: 121 FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
           FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 563 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 622

Query: 181 RIGPINGKFLKKFYA 196
           RIGPINGKFLKKFYA
Sbjct: 623 RIGPINGKFLKKFYA 637

[Close]

BLAST of Pay0006344 vs. NCBI nr
Match: KAA0061096.1 (uncharacterized protein E6C27_scaffold348G00050 [Cucumis melo var. makuwa] >TYK03766.1 uncharacterized protein E5676_scaffold863G001490 [Cucumis melo var. makuwa])

HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1   MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
           MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVT YSLVY
Sbjct: 696 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTSYSLVY 755

Query: 61  GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
           GVEAVLPLER+IPSLRMAIQEGLTTEDNARL LQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 756 GVEAVLPLEREIPSLRMAIQEGLTTEDNARLHLQELEALDEKRLEAQQALECYQARMSKA 815

Query: 121 FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
           FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL
Sbjct: 816 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 875

Query: 181 RIGPINGKFLKKFYA 196
           RIGPINGKFLKKFYA
Sbjct: 876 RIGPINGKFLKKFYA 890

[Close]

BLAST of Pay0006344 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 371.7 bits (953), Expect = 3.9e-99
Identity = 185/195 (94.87%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1    MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
            MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 2124 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 2183

Query: 61   GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
            GVEAVLPLER+IPSLRMAIQEGLTTEDNARL LQEL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 2184 GVEAVLPLEREIPSLRMAIQEGLTTEDNARLRLQELEALDEKRLEAQQALECYQARMSKA 2243

Query: 121  FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
            FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 2244 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 2303

Query: 181  RIGPINGKFLKKFYA 196
            +IGPINGKFLKKFYA
Sbjct: 2304 QIGPINGKFLKKFYA 2318

[Close]

BLAST of Pay0006344 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 370.9 bits (951), Expect = 6.6e-99
Identity = 184/195 (94.36%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1    MYNAAANGLTEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYKTTHRTSTGVTPYSLVY 60
            MYNAAANGL EAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAY+TTHRT TGVTPYSLVY
Sbjct: 2194 MYNAAANGLAEAFNKTLCSLLKKVVSKTKRDWQEKIGEALWAYRTTHRTPTGVTPYSLVY 2253

Query: 61   GVEAVLPLERKIPSLRMAIQEGLTTEDNARLCLQELKALDEKRLEAQQALEYYQARMSKA 120
            GVEAVLPLER+IPSLRMAIQEGLTTEDNARL L+EL+ALDEKRLEAQQALE YQARMSKA
Sbjct: 2254 GVEAVLPLEREIPSLRMAIQEGLTTEDNARLRLEELEALDEKRLEAQQALECYQARMSKA 2313

Query: 121  FDKQVRPRPFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKITDQDGL 180
            FDKQVRPR FQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKI DQDGL
Sbjct: 2314 FDKQVRPRSFQVGDLVLAVRRPIITTRHTGNKFTPKWDGPYIVKEVFTNGAYKIIDQDGL 2373

Query: 181  RIGPINGKFLKKFYA 196
            RIGPING+FLKKFYA
Sbjct: 2374 RIGPINGRFLKKFYA 2388

The following BLAST results are available for this feature:

BLAST of Pay0006344 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0006344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BTY1	3.8e-100	94.36	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00630 ...	[more]
A0A5A7UZS6	3.8e-100	94.36	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004880...	[more]
A0A5A7V3K3	1.1e-99	95.38	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00149...	[more]
A0A5D3D1E5	1.9e-99	94.87	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]
A0A5A7TZU9	3.2e-99	94.36	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]

BLAST of Pay0006344 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02262.1	7.8e-100	94.36	uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]	[more]
KAA0060610.1	7.8e-100	94.36	uncharacterized protein E6C27_scaffold22G004880 [Cucumis melo var. makuwa]	[more]
KAA0061096.1	2.3e-99	95.38	uncharacterized protein E6C27_scaffold348G00050 [Cucumis melo var. makuwa] >TYK0...	[more]
TYK18071.1	3.9e-99	94.87	uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	6.6e-99	94.36	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0006344 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..116
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 5..150
None	No IPR available	PANTHER	PTHR24559:SF342	SUBFAMILY NOT NAMED	coord: 5..150
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..114 e-value: 5.3E-18 score: 67.0
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006344.1	Pay0006344.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding