
Pay0006078 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCCTTTCTTATTTATTTTTCCACAAAATCTTCCTTTCTCCCCCATTTTTATTTCAAAGTTTCTTTTCACTCCTTCATTTTTCCCCCTCATTTCCCTCCTAAATTTCCTTTCCTCTGTTTTTCAATTTTCACCCTTCCTTTTATTTTTTAAATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAAGCCGAACAAAAAAAATGGGTAATCGCGGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAGAAGGACCAATTTGGTTTGTAATAGTTGAGAATTTAGGGGTTTCTTTGTTTTTTTTTTCTTTTTTTGGGTGTTTGTTTAATTTTTCTTTTTTTGGGGGGTTTTCTTTAATATTATTATTTTTTATGTACTTGGTTAGTTATTAGGAGTAAGGAGATTATGATGTATAAAGGATTTGATATTTGTTATCTAAATGAGTATTATCACTATTATTATTATATTTTAGCTTTGCTTTAAATTTTGGGCAATTCTCTTGGAATTTTCTCATGAAACAAACAGACCCAGATGGGAAAATTTTTCATTAGTGAATCTAAA TTCCCTTTCTTATTTATTTTTCCACAAAATCTTCCTTTCTCCCCCATTTTTATTTCAAAGTTTCTTTTCACTCCTTCATTTTTCCCCCTCATTTCCCTCCTAAATTTCCTTTCCTCTGTTTTTCAATTTTCACCCTTCCTTTTATTTTTTAAATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAAGCCGAACAAAAAAAATGGGTAATCGCGGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAGAAGGACCAATTTGGTTTGTAATAGTTGAGAATTTAGGGGTTTCTTTGTTTTTTTTTTCTTTTTTTGGGTGTTTGTTTAATTTTTCTTTTTTTGGGGGGTTTTCTTTAATATTATTATTTTTTATGTACTTGGTTAGTTATTAGGAGTAAGGAGATTATGATGTATAAAGGATTTGATATTTGTTATCTAAATGAGTATTATCACTATTATTATTATATTTTAGCTTTGCTTTAAATTTTGGGCAATTCTCTTGGAATTTTCTCATGAAACAAACAGACCCAGATGGGAAAATTTTTCATTAGTGAATCTAAA ATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAAGCCGAACAAAAAAAATGGGTAATCGCGGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAG MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV Homology
BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.9e-20 Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.5e-12 Identity = 50/107 (46.73%), Postives = 62/107 (57.94%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.8e-10 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q9LVX6 (Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 GN=SMR7 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09 Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04 Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A5D3BY33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00180 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A1S3C883 (uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A0A0KUE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A6J1JVL3 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111489273 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36 Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A6J1FHD8 (cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=LOC111445393 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36 Identity = 85/104 (81.73%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of Pay0006078 vs. NCBI nr
Match: XP_008458799.1 (PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo] >KAA0037576.1 uncharacterized protein E6C27_scaffold277G002090 [Cucumis melo var. makuwa] >TYK03096.1 uncharacterized protein E5676_scaffold374G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 198.7 bits (504), Expect = 2.3e-47 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Pay0006078 vs. NCBI nr
Match: XP_004142790.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucumis sativus] >KGN51361.1 hypothetical protein Csa_008029 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45 Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of Pay0006078 vs. NCBI nr
Match: XP_038890813.1 (cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida]) HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of Pay0006078 vs. NCBI nr
Match: KAG7016206.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165.6 bits (418), Expect = 2.2e-37 Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Pay0006078 vs. NCBI nr
Match: KAG6578666.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165.6 bits (418), Expect = 2.2e-37 Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Pay0006078 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21 Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 0
BLAST of Pay0006078 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 6.7e-13 Identity = 50/107 (46.73%), Postives = 62/107 (57.94%), Query Frame = 0
BLAST of Pay0006078 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 4.8e-11 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Pay0006078 vs. TAIR 10
Match: AT3G27630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40460.1); Has 36 Blast hits to 36 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10 Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of Pay0006078 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.4e-05 Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|