Pay0006078 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006078
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	cyclin-dependent protein kinase inhibitor SMR6
Location	chr09: 4263323 .. 4264089 (+)
RNA-Seq Expression	Pay0006078
Synteny	Pay0006078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTTTCTTATTTATTTTTCCACAAAATCTTCCTTTCTCCCCCATTTTTATTTCAAAGTTTCTTTTCACTCCTTCATTTTTCCCCCTCATTTCCCTCCTAAATTTCCTTTCCTCTGTTTTTCAATTTTCACCCTTCCTTTTATTTTTTAAATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAAGCCGAACAAAAAAAATGGGTAATCGCGGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAGAAGGACCAATTTGGTTTGTAATAGTTGAGAATTTAGGGGTTTCTTTGTTTTTTTTTTCTTTTTTTGGGTGTTTGTTTAATTTTTCTTTTTTTGGGGGGTTTTCTTTAATATTATTATTTTTTATGTACTTGGTTAGTTATTAGGAGTAAGGAGATTATGATGTATAAAGGATTTGATATTTGTTATCTAAATGAGTATTATCACTATTATTATTATATTTTAGCTTTGCTTTAAATTTTGGGCAATTCTCTTGGAATTTTCTCATGAAACAAACAGACCCAGATGGGAAAATTTTTCATTAGTGAATCTAAA

mRNA sequence

TTCCCTTTCTTATTTATTTTTCCACAAAATCTTCCTTTCTCCCCCATTTTTATTTCAAAGTTTCTTTTCACTCCTTCATTTTTCCCCCTCATTTCCCTCCTAAATTTCCTTTCCTCTGTTTTTCAATTTTCACCCTTCCTTTTATTTTTTAAATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAAGCCGAACAAAAAAAATGGGTAATCGCGGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAGAAGGACCAATTTGGTTTGTAATAGTTGAGAATTTAGGGGTTTCTTTGTTTTTTTTTTCTTTTTTTGGGTGTTTGTTTAATTTTTCTTTTTTTGGGGGGTTTTCTTTAATATTATTATTTTTTATGTACTTGGTTAGTTATTAGGAGTAAGGAGATTATGATGTATAAAGGATTTGATATTTGTTATCTAAATGAGTATTATCACTATTATTATTATATTTTAGCTTTGCTTTAAATTTTGGGCAATTCTCTTGGAATTTTCTCATGAAACAAACAGACCCAGATGGGAAAATTTTTCATTAGTGAATCTAAA

Coding sequence (CDS)

ATGGGATTCTCCAAAAAATCTCAAATCGACTCTGGATTTGAAGCCGAACAAAAAAAATGGGTAATCGCGGGGTTGTCGGCAAGGTCATCGTTGAAGCCGATTAACACGAAATCAAAGACGAAAGAGGGAGAAGAGGACGGGGAGAAGACACCGACGGGGAAAGAAGCTAGAATACCGGAGAAATTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAGAATCATATGAGGGAGTTCTTCAATCCTCCTGATTTAGAATCTGTGTTCAAGCTAAGAGTTTAG

Protein sequence

MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV

Homology

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BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-20
Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTK------------EGEEDGE 60
           MGFSKKSQ + G E++ KKWVIAG+S R+SLKP+ TK +                EE+  
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  KTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPP-DLESVFKLR 100
            TPT KE +IPE L CPPAPRKRR +LK  SN   +REFF PP DLE+VF  R
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNV--VREFFTPPSDLETVFLRR 111

[Close]

BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.5e-12
Identity = 50/107 (46.73%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 1   MGFSKKS--QIDSGFE--AEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGE---KTPTG 60
           MGFS K+  Q D  F    E KK VI G+S  S++KPI+  S      ED +    TPT 
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDEDLCPTTPTA 60

Query: 61  KEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDLESVFKLR 100
              RIP  + CPPAP+KR+ +LK S      REFF+PPDLE+VF  R
Sbjct: 61  DSVRIPTVIPCPPAPKKRKLTLKVSYGP---REFFSPPDLETVFIYR 104

[Close]

BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.8e-10
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 1   MGFSKK--SQIDSGF--EAEQKKWVIAGLSARSSLKPIN-----TKSKTKEGEEDGEKTP 60
           MG+S K   Q+D       + KKWVIAG+ +RS LK IN     T ++T+E ++    TP
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEE-QDQCPTTP 60

Query: 61  TGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF 97
           T    RIP    CP AP+KR+     S     R++F+PPDLE+VF
Sbjct: 61  TAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: Q9LVX6 (Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 GN=SMR7 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09
Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 1  MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTK-SKTKEGEEDGE-KTPTGKEARI 60
          MG SKKSQ+    + + KK++ A  S R+SLKP+ TK  K +   EDG   TPT + A+ 
Sbjct: 1  MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERESEDGICITPTARGAKT 60

Query: 61 PEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF 97
          PE   CP APRKR  +    N   +  F  P D E VF
Sbjct: 61 PE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of Pay0006078 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-04
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 50  TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF 97
           TP  K++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A5D3BY33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00180 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60
           MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A1S3C883 (uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60
           MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A0A0KUE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60
           MGFSKKSQID+GFE E KKWVIAGLSARSSLKPINTKSKTKEGE+DG+KTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A6J1JVL3 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111489273 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 85/104 (81.73%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEK----TPTGKEA 60
           MGFSKKSQID G EAE KKWVIAGL ARSSLKPI+TKS+ K+GE+D EK    TPT KEA
Sbjct: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGEDDCEKSRSTTPTAKEA 60

Query: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Pay0006078 vs. ExPASy TrEMBL
Match: A0A6J1FHD8 (cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=LOC111445393 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 85/104 (81.73%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEK----TPTGKEA 60
           MGFSKKSQID GFE E KKWVIAGL ARSSLKPI TK + K+GE+DGEK    TPT KEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKPRAKDGEDDGEKSHSTTPTAKEA 60

Query: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLICPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Pay0006078 vs. NCBI nr
Match: XP_008458799.1 (PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo] >KAA0037576.1 uncharacterized protein E6C27_scaffold277G002090 [Cucumis melo var. makuwa] >TYK03096.1 uncharacterized protein E5676_scaffold374G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.3e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60
           MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of Pay0006078 vs. NCBI nr
Match: XP_004142790.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucumis sativus] >KGN51361.1 hypothetical protein Csa_008029 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 95/100 (95.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60
           MGFSKKSQID+GFE E KKWVIAGLSARSSLKPINTKSKTKEGE+DG+KTPTGKEARIPE
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGDKTPTGKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of Pay0006078 vs. NCBI nr
Match: XP_038890813.1 (cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida])

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEKTPTGKEARIPE 60
           MGFSKKSQID GFEAE KKWVIAGL  RSSLKPI+TKSK K+GE+DGEKTPT KEARIPE
Sbjct: 1   MGFSKKSQIDGGFEAEGKKWVIAGLPTRSSLKPISTKSKAKDGEDDGEKTPTAKEARIPE 60

Query: 61  KLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           KLGCPPAPRKRRSLKSSSNQN++REFFNPPDLESVFKLRV
Sbjct: 61  KLGCPPAPRKRRSLKSSSNQNYIREFFNPPDLESVFKLRV 100

[Close]

BLAST of Pay0006078 vs. NCBI nr
Match: KAG7016206.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.6 bits (418), Expect = 2.2e-37
Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEK----TPTGKEA 60
           MGFSKKSQID GFE E KKWVIAGL ARSSLKPI TKS+ K+GE+DGEK    TPT KEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGEDDGEKSRSTTPTAKEA 60

Query: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Pay0006078 vs. NCBI nr
Match: KAG6578666.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 2.2e-37
Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGEK----TPTGKEA 60
           MGFSKKSQID GFE E KKWVIAGL ARSSLKPI TKS+ K+GE+DGEK    TPT KEA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGEDDGEKSRSTTPTAKEA 60

Query: 61  RIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 101
           RIPEKL CP APRKRRSLKSSSNQNH REFFNPPDLESVFK+RV
Sbjct: 61  RIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of Pay0006078 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21
Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTK------------EGEEDGE 60
           MGFSKKSQ + G E++ KKWVIAG+S R+SLKP+ TK +                EE+  
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  KTPTGKEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPP-DLESVFKLR 100
            TPT KE +IPE L CPPAPRKRR +LK  SN   +REFF PP DLE+VF  R
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNV--VREFFTPPSDLETVFLRR 111

[Close]

BLAST of Pay0006078 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-13
Identity = 50/107 (46.73%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 1   MGFSKKS--QIDSGFE--AEQKKWVIAGLSARSSLKPINTKSKTKEGEEDGE---KTPTG 60
           MGFS K+  Q D  F    E KK VI G+S  S++KPI+  S      ED +    TPT 
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDEDLCPTTPTA 60

Query: 61  KEARIPEKLGCPPAPRKRR-SLKSSSNQNHMREFFNPPDLESVFKLR 100
              RIP  + CPPAP+KR+ +LK S      REFF+PPDLE+VF  R
Sbjct: 61  DSVRIPTVIPCPPAPKKRKLTLKVSYGP---REFFSPPDLETVFIYR 104

[Close]

BLAST of Pay0006078 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.8e-11
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 1   MGFSKK--SQIDSGF--EAEQKKWVIAGLSARSSLKPIN-----TKSKTKEGEEDGEKTP 60
           MG+S K   Q+D       + KKWVIAG+ +RS LK IN     T ++T+E ++    TP
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEE-QDQCPTTP 60

Query: 61  TGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF 97
           T    RIP    CP AP+KR+     S     R++F+PPDLE+VF
Sbjct: 61  TAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of Pay0006078 vs. TAIR 10
Match: AT3G27630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40460.1); Has 36 Blast hits to 36 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10
Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 1  MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTK-SKTKEGEEDGE-KTPTGKEARI 60
          MG SKKSQ+    + + KK++ A  S R+SLKP+ TK  K +   EDG   TPT + A+ 
Sbjct: 1  MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTKLIKPERESEDGICITPTARGAKT 60

Query: 61 PEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF 97
          PE   CP APRKR  +    N   +  F  P D E VF
Sbjct: 61 PE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of Pay0006078 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.4e-05
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 50  TPTGKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVF 97
           TP  K++RIPE L CPPAP+K+R  K+   +     FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

The following BLAST results are available for this feature:

BLAST of Pay0006078 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q29Q81	1.9e-20	53.98	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	9.5e-12	46.73	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SAD3	6.8e-10	41.90	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LVX6	1.5e-09	42.86	Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 G...	[more]
F4IWB3	1.9e-04	46.81	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0006078 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BY33	1.1e-47	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C883	1.1e-47	100.00	uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=...	[more]
A0A0A0KUE2	2.3e-45	95.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1	[more]
A0A6J1JVL3	1.2e-36	81.73	cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1FHD8	1.2e-36	81.73	cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Pay0006078 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458799.1	2.3e-47	100.00	PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo] >KAA0037576.1 unc...	[more]
XP_004142790.1	4.8e-45	95.00	cyclin-dependent protein kinase inhibitor SMR6 [Cucumis sativus] >KGN51361.1 hyp...	[more]
XP_038890813.1	2.5e-41	89.00	cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida]	[more]
KAG7016206.1	2.2e-37	82.69	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]
KAG6578666.1	2.2e-37	82.69	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]

BLAST of Pay0006078 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40460.1	1.4e-21	53.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G60783.1	6.7e-13	46.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10690.1	4.8e-11	41.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G27630.1	1.1e-10	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G20898.1	1.4e-05	46.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..56
None	No IPR available	PANTHER	PTHR33142:SF40	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR6-RELATED	coord: 1..100
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006078.1	Pay0006078.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus