Pay0006035 (gene) Melon (Payzawat) v1

Overview


Name	Pay0006035
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	GATA type zinc finger transcription factor family protein
Location	chr01: 910242 .. 912024 (+)
RNA-Seq Expression	Pay0006035
Synteny	Pay0006035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAACACAAACCCACGACGCAAACAAACAAACAAACAAAGAGAGCAGTGGCATTACCCAGAAAAGATAAAGAAGAAGGGAAGCCACTCTCTCCAGCCCGTTCCTCATCGTTGTTCGGTCGGTTTTAGAGCGTTTGGGGAGGCATATTATATAACAAAAAAAGGATGGCTAGCTTTGCAGGAACCACACAGAAATGCATGGCTTGCGAGAAGACCGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGAGTGTTCCATAAGGTTTGCTTCCGATGCTACCATTGTAGAGGCACTCTCAAGGTAATGTAATATATGTGTGTGTGTTTCTGTATCGAAAACAATTTTACGAACATGCATTGGATGCTTGTTTGATGACAATGATTTCGATTTGAAAATAATTTCTAAAAGAAAGAGAAAAAGAAAAAAGAAAATTTGAACAAATAGGTTAATTAATTGATTTGTATATAATTAATATGCTATATATGGTTTTGCAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTCTATTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGCTTTGAAGGCAATTTTTCTTTTTCCTTTTTCTTTTTAATTTCAAATCACACCCTCTATAATTTTCCTATCTTTGCAGAATTAGAACATTTGAAATTTATTTTAAACTTTATATATACATATACTGTAAGTTTTTCCAAAAATGATAGGGTATAATATAATTCTAAAATCGAATATTTTTCTTTTCATCAGGAACTCCAAAACTCATGAAACCAGAAAAGCCCAGCGAAAATGAGGTAATATTCTTTTTATCAATTAATTATACTTATATATATATATATATATATATTGAAAAACAATGTCGAGAAACCAAATTATAATCAAACAAGATTTGATTTTGGATTGAACTTTGGACATGAACAGAATGCAAAGTCAGTGTCCAACATGTTTGGTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTAATACTTTACAATAAAAAGAAATATAATTTATCAAACAAAAATTACTGATTAGTTATTTATTATTACTATCATATAGAGTGTTTGTTACTTTGATACATAAAAAAATTCAATTTCAACGATCATTTAAAATATGCACTATATCGATCTCAAGGTTAGAAGTTAGACATAAAAATGAGTATAGATATAAAAATGTATAGGAAATTGGTTCTTTCACTCCACACATATCGTCCAAAAAAAGTTGAAGATGTTGTGTTTGTGGGTATAGGTAACGGTGAACGGGACGGCGTACCACAAAAGCTGCTTTAAATGTAGCCATGGAGGATGCACAATAAGTCCATCAAATTACATAGCACATGAAGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAAGGAAATTACAGCCAACTTGAAACTGAGCGCCAAAAGAACAATTCAGCAGTGGCAGCGGCAATCAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAGCAATATATGATATTATATCAATCTCTCACATCTTTTAATTCTTCACACCTTCAAAAAAATCAAATATTGTTGAATATTGTTTGTTGCAAAATTTGTGTTGTTTGTTTTCTCCATTTCTTTAAAAGTGGATTATTATTATTATTATTATCATTCTCTGTGGAAGGTCAGTTTGTTGATGATGTTTTCACCATTTTTAGTTGTAAACGTTTTAACAAACTATTTATATTATTTAATGTCATCC

mRNA sequence

GAAAAACACAAACCCACGACGCAAACAAACAAACAAACAAAGAGAGCAGTGGCATTACCCAGAAAAGATAAAGAAGAAGGGAAGCCACTCTCTCCAGCCCGTTCCTCATCGTTGTTCGGTCGGTTTTAGAGCGTTTGGGGAGGCATATTATATAACAAAAAAAGGATGGCTAGCTTTGCAGGAACCACACAGAAATGCATGGCTTGCGAGAAGACCGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGAGTGTTCCATAAGGTTTGCTTCCGATGCTACCATTGTAGAGGCACTCTCAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTCTATTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGCTTTGAAGGAACTCCAAAACTCATGAAACCAGAAAAGCCCAGCGAAAATGAGAATGCAAAGTCAGTGTCCAACATGTTTGGTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTAACGGTGAACGGGACGGCGTACCACAAAAGCTGCTTTAAATGTAGCCATGGAGGATGCACAATAAGTCCATCAAATTACATAGCACATGAAGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAAGGAAATTACAGCCAACTTGAAACTGAGCGCCAAAAGAACAATTCAGCAGTGGCAGCGGCAATCAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAGCAATATATGATATTATATCAATCTCTCACATCTTTTAATTCTTCACACCTTCAAAAAAATCAAATATTGTTGAATATTGTTTGTTGCAAAATTTGTGTTGTTTGTTTTCTCCATTTCTTTAAAAGTGGATTATTATTATTATTATTATCATTCTCTGTGGAAGGTCAGTTTGTTGATGATGTTTTCACCATTTTTAGTTGTAAACGTTTTAACAAACTATTTATATTATTTAATGTCATCC

Coding sequence (CDS)

ATGGCTAGCTTTGCAGGAACCACACAGAAATGCATGGCTTGCGAGAAGACCGTTTATCTTGTAGATAAGCTGACTGCTGATAATAGAGTGTTCCATAAGGTTTGCTTCCGATGCTACCATTGTAGAGGCACTCTCAAGCTTAGCAACTATTGTTCCTTTGAGGGAGTGCTCTATTGCAGGCCTCACTATGATCAACTCTTCAAGAGAACTGGCAGCCTTGACAAGAGCTTTGAAGGAACTCCAAAACTCATGAAACCAGAAAAGCCCAGCGAAAATGAGAATGCAAAGTCAGTGTCCAACATGTTTGGTGGCACCAGAGACAAATGTTCAGGCTGTACCAAGACTGTTTATCCCATTGAAAAGGTAACGGTGAACGGGACGGCGTACCACAAAAGCTGCTTTAAATGTAGCCATGGAGGATGCACAATAAGTCCATCAAATTACATAGCACATGAAGGAAAACTATATTGCAAACATCATCACATTCAACTATTCAAGGAGAAAGGAAATTACAGCCAACTTGAAACTGAGCGCCAAAAGAACAATTCAGCAGTGGCAGCGGCAATCAAATTAACCACTCCAATGGAAATTGCAGCTGAATCATAG

Protein sequence

MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNNSAVAAAIKLTTPMEIAAES

Homology

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BLAST of Pay0006035 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-85
Identity = 149/189 (78.84%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           +FAGTTQKCMAC+KTVYLVDKLTADNRV+HK CFRC+HC+GTLKLSNY SFEGVLYCRPH
Sbjct: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPKLMKPEKPSENEN--AKSVSNMFGGTRDKCSGCTKTVYPIE 122
           +DQ FKRTGSL+KSFEGTPK+ KP++P E E      VSNMFGGTR+KC GC KTVYPIE
Sbjct: 62  FDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIE 121

Query: 123 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLE--TER 182
           KV+VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKGN SQLE   E 
Sbjct: 122 KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGEN 181

Query: 183 QKNNSAVAA 188
              +  VAA
Sbjct: 182 AAKDKVVAA 190

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BLAST of Pay0006035 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.9e-76
Identity = 130/179 (72.63%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           M SF GTTQKC  CEKTVYLVDKL A+ RV+HK CFRC+HC  TLKLSN+ SF+GV+YCR
Sbjct: 1   MKSFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEK--PSENENAKSVSNMFGGTRDKCSGCTKTVYP 120
            H+DQLFKRTGSL+KSF+GTPK  KPE+    E ++A  +S+ F GTRDKC+ C K VYP
Sbjct: 61  HHFDQLFKRTGSLEKSFDGTPK-FKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYP 120

Query: 121 IEKVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETE 178
           IE+V V+GTAYH++CFKC HGGCTISPSNYIAHEG+LYCKHHHIQLFK+KGNYSQLE E
Sbjct: 121 IERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVE 178

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BLAST of Pay0006035 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-60
Identity = 110/186 (59.14%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LSNY S EGV+YCRPH
Sbjct: 2   SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPK-LMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEK 122
           ++QLFK +GS  K+F+   K L     P  N     ++ MF GT+DKC+ CTKTVYPIEK
Sbjct: 62  FEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEK 121

Query: 123 VTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKN 182
           VTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L       
Sbjct: 122 VTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 181

Query: 183 NSAVAA 188
            +  AA
Sbjct: 182 RATAAA 187

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BLAST of Pay0006035 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-59
Identity = 111/199 (55.78%), Postives = 133/199 (66.83%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKV 122
           ++QLFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKV
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKV 121

Query: 123 TVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNN 182
           TV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        
Sbjct: 122 TVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181

Query: 183 SAVAAAIKLTTPMEIAAES 202
           SA AAA+    P     ES
Sbjct: 182 SA-AAAVAAGVPAASVPES 199

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BLAST of Pay0006035 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.8e-52
Identity = 90/174 (51.72%), Postives = 125/174 (71.84%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF GT  KC AC+KTVY++D LT +   +HK CFRC HC+GTL +SNY S +GVLYC+PH
Sbjct: 2   SFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPKLMKPEKPSEN--ENAKSVSNMFGGTRDKCSGCTKTVYPIE 122
           ++QLFK +G+  K+F+      K EKP+++       +S+ F GT+DKC+ C KTVYP+E
Sbjct: 62  FEQLFKESGNYSKNFQAG----KTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLE 121

Query: 123 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQL 175
           KVT+ G +YHK+CF+C+H GC ++ S+Y +  G LYCK H  QLF EKG+Y+ +
Sbjct: 122 KVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

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BLAST of Pay0006035 vs. ExPASy TrEMBL
Match: A0A5A7SP97 (LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001270 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.5e-115
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
           NNSAVAAAIKLTTPMEIAAES
Sbjct: 181 NNSAVAAAIKLTTPMEIAAES 201

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BLAST of Pay0006035 vs. ExPASy TrEMBL
Match: A0A0A0K2E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 190/201 (94.53%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMACEKTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK+M+ EKPSENENAKSVSNMFGGTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNG AYHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKGNYSQLETERQK
Sbjct: 121 KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
           NNSA+AAAIKLTTPMEIAAES
Sbjct: 181 NNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of Pay0006035 vs. ExPASy TrEMBL
Match: A0A6J1GLG2 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111455348 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.0e-105
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFAGTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
            NS     +    PMEIAAES
Sbjct: 181 ENSVPINTLNANNPMEIAAES 201

[Close]

BLAST of Pay0006035 vs. ExPASy TrEMBL
Match: A0A6J1I4V6 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111471016 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.6e-104
Identity = 178/201 (88.56%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF GTTQ+CMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFVGTTQRCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
            NS     +    PMEIAAES
Sbjct: 181 ENSVPINTLDANNPMEIAAES 201

[Close]

BLAST of Pay0006035 vs. ExPASy TrEMBL
Match: A0A6J1D4V0 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111017319 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 180/201 (89.55%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMACEKTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK +KPEKP+E ENAKSVSNMFGGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPK-VKPEKPTETENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHK+CFKC+HGGCTISPSNYIAHEGKLYCKHHHIQLF EKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKTCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLFMEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
           N    + ++ LT+P+EIAAES
Sbjct: 181 N----SVSMNLTSPVEIAAES 196

[Close]

BLAST of Pay0006035 vs. NCBI nr
Match: KAA0031371.1 (LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain protein GLIM1a [Cucumis melo var. makuwa])

HSP 1 Score: 424.5 bits (1090), Expect = 5.2e-115
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
           NNSAVAAAIKLTTPMEIAAES
Sbjct: 181 NNSAVAAAIKLTTPMEIAAES 201

[Close]

BLAST of Pay0006035 vs. NCBI nr
Match: XP_004136935.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical protein Csa_017260 [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-109
Identity = 190/201 (94.53%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASF+GTTQKCMACEKTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFSGTTQKCMACEKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK+M+ EKPSENENAKSVSNMFGGTRDKCSGCTKTVY IE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVMRSEKPSENENAKSVSNMFGGTRDKCSGCTKTVYLIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNG AYHKSCFKCSHGGCTISPS+YIAHEGKLYCKHHHIQLF EKGNYSQLETERQK
Sbjct: 121 KVTVNGNAYHKSCFKCSHGGCTISPSSYIAHEGKLYCKHHHIQLFMEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
           NNSA+AAAIKLTTPMEIAAES
Sbjct: 181 NNSAIAAAIKLTTPMEIAAES 201

[Close]

BLAST of Pay0006035 vs. NCBI nr
Match: XP_038888760.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 394.0 bits (1011), Expect = 7.5e-106
Identity = 185/201 (92.04%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFAGTTQKCMAC+KTVYLVDKLTADNRVFHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK++K +KP+ENENAKSVSNMF GTRDKCSGCTKTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKVVKLDKPTENENAKSVSNMFAGTRDKCSGCTKTVYPIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
           NN+A + A+ LT+PMEIAAES
Sbjct: 181 NNNA-SVAMTLTSPMEIAAES 200

[Close]

BLAST of Pay0006035 vs. NCBI nr
Match: XP_023553857.1 (LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFAGTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 1   MASFAGTTQKCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCR 60

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIE
Sbjct: 61  PHYDQLFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIE 120

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
            NS     +    PMEIAAES
Sbjct: 181 ENSVPIDTLNANNPMEIAAES 201

[Close]

BLAST of Pay0006035 vs. NCBI nr
Match: KAG6571916.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104
Identity = 180/201 (89.55%), Postives = 188/201 (93.53%), Query Frame = 0


Query: 1   MASFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCR 60
           MASFAGTTQKCMAC+KTVYLVDKLTADNR+FHK CFRCYHC+GTLKLSNYCSFEGVLYCR
Sbjct: 111 MASFAGTTQKCMACDKTVYLVDKLTADNRIFHKPCFRCYHCKGTLKLSNYCSFEGVLYCR 170

Query: 61  PHYDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIE 120
           PHYDQLFKRTGSLDKSFEGTPK+ KPEKP+ENENAKSVS+MFGGTRDKC+GC KTVYPIE
Sbjct: 171 PHYDQLFKRTGSLDKSFEGTPKITKPEKPTENENAKSVSSMFGGTRDKCAGCIKTVYPIE 230

Query: 121 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 180
           KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK
Sbjct: 231 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQK 290

Query: 181 NNSAVAAAIKLTTPMEIAAES 202
            NS     +    PMEIAAES
Sbjct: 291 ENSVPINTLNANNPMEIAAES 311

[Close]

BLAST of Pay0006035 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 317.4 bits (812), Expect = 8.3e-87
Identity = 149/189 (78.84%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           +FAGTTQKCMAC+KTVYLVDKLTADNRV+HK CFRC+HC+GTLKLSNY SFEGVLYCRPH
Sbjct: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPKLMKPEKPSENEN--AKSVSNMFGGTRDKCSGCTKTVYPIE 122
           +DQ FKRTGSL+KSFEGTPK+ KP++P E E      VSNMFGGTR+KC GC KTVYPIE
Sbjct: 62  FDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIE 121

Query: 123 KVTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLE--TER 182
           KV+VNGT YHKSCFKC+HGGCTISPSNYIAHEGKLYCKHHHIQL KEKGN SQLE   E 
Sbjct: 122 KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGEN 181

Query: 183 QKNNSAVAA 188
              +  VAA
Sbjct: 182 AAKDKVVAA 190

[Close]

BLAST of Pay0006035 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 234.2 bits (596), Expect = 9.3e-62
Identity = 110/186 (59.14%), Postives = 129/186 (69.35%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LSNY S EGV+YCRPH
Sbjct: 2   SFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPK-LMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEK 122
           ++QLFK +GS  K+F+   K L     P  N     ++ MF GT+DKC+ CTKTVYPIEK
Sbjct: 62  FEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEK 121

Query: 123 VTVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKN 182
           VTV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L       
Sbjct: 122 VTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 181

Query: 183 NSAVAA 188
            +  AA
Sbjct: 182 RATAAA 187

[Close]

BLAST of Pay0006035 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.0e-60
Identity = 111/199 (55.78%), Postives = 133/199 (66.83%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKV 122
           ++QLFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKV
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKV 121

Query: 123 TVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNN 182
           TV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        
Sbjct: 122 TVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181

Query: 183 SAVAAAIKLTTPMEIAAES 202
           SA AAA+    P     ES
Sbjct: 182 SA-AAAVAAGVPAASVPES 199

[Close]

BLAST of Pay0006035 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.0e-60
Identity = 111/199 (55.78%), Postives = 133/199 (66.83%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKV 122
           ++QLFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKV
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKV 121

Query: 123 TVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNN 182
           TV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        
Sbjct: 122 TVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181

Query: 183 SAVAAAIKLTTPMEIAAES 202
           SA AAA+    P     ES
Sbjct: 182 SA-AAAVAAGVPAASVPES 199

[Close]

BLAST of Pay0006035 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.0e-60
Identity = 111/199 (55.78%), Postives = 133/199 (66.83%), Query Frame = 0


Query: 3   SFAGTTQKCMACEKTVYLVDKLTADNRVFHKVCFRCYHCRGTLKLSNYCSFEGVLYCRPH 62
           SF GT QKC ACEKTVY V+ L+AD   +HK CF+C HC+  L+LS+Y S EGVLYC+PH
Sbjct: 2   SFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPH 61

Query: 63  YDQLFKRTGSLDKSFEGTPKLMKPEKPSENENAKSVSNMFGGTRDKCSGCTKTVYPIEKV 122
           ++QLFK +GS +K+F+   K      P        V+  F GT++KC+ C+KTVYPIEKV
Sbjct: 62  FEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKV 121

Query: 123 TVNGTAYHKSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFKEKGNYSQLETERQKNN 182
           TV    YHKSCFKCSHGGC ISPSNY A EG LYCKHH  QLFKEKG+Y+ L        
Sbjct: 122 TVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181

Query: 183 SAVAAAIKLTTPMEIAAES 202
           SA AAA+    P     ES
Sbjct: 182 SA-AAAVAAGVPAASVPES 199

The following BLAST results are available for this feature:

BLAST of Pay0006035 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	1.2e-85	78.84	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	2.9e-76	72.63	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	1.3e-60	59.14	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	1.4e-59	55.78	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	3.8e-52	51.72	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of Pay0006035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SP97	2.5e-115	100.00	LIM domain protein GLIM1a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0K2E5	2.1e-109	94.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071340 PE=4 SV=1	[more]
A0A6J1GLG2	9.0e-105	89.55	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I4V6	7.6e-104	88.56	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1D4V0	1.4e-102	89.55	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Pay0006035 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031371.1	5.2e-115	100.00	LIM domain protein GLIM1a [Cucumis melo var. makuwa] >TYK06823.1 LIM domain prot...	[more]
XP_004136935.1	4.3e-109	94.53	LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN43845.1 hypothetical p...	[more]
XP_038888760.1	7.5e-106	92.04	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]
XP_023553857.1	1.8e-104	89.55	LIM domain-containing protein WLIM1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571916.1	1.8e-104	89.55	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Pay0006035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	8.3e-87	78.84	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	9.3e-62	59.14	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.0e-60	55.78	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	1.0e-60	55.78	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	1.0e-60	55.78	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 108..160 e-value: 4.5E-15 score: 66.1 coord: 10..62 e-value: 2.7E-9 score: 46.9
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 109..164 e-value: 9.0E-13 score: 48.3 coord: 11..65 e-value: 2.9E-9 score: 37.0
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 11..45
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 9..69 score: 12.9889
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 107..167 score: 12.8503
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 104..173 e-value: 5.0E-20 score: 73.4 coord: 5..75 e-value: 1.9E-18 score: 68.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..97
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..186
None	No IPR available	PANTHER	PTHR24206:SF35	LIM DOMAIN-CONTAINING PROTEIN WLIM1	coord: 1..186
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 109..169 e-value: 2.36491E-39 score: 127.201
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 7..69 e-value: 1.02783E-36 score: 120.647
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..36
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 101..134
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 135..174
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 37..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0006035.1	Pay0006035.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding