Pay0005910 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005910
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	histone H2B-like
Location	chr12: 9703678 .. 9704795 (+)
RNA-Seq Expression	Pay0005910
Synteny	Pay0005910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGGTGACTCCGGAGATGGAACCCGAGGTCCAGAAAGGTAAGAGACTTAAGAGTATCGATATAATTTAACATGATATTATTTAATTAAATCAAATTTTGCAATGAACTTGTCAGTGACACATGAATTTGAACTCTTTTAGCTTTCATCCCACTAATTTTATAACAAAAAAAAAAAAAATTCACTCATTAATGCATGTAGTTTCATATTGTATATGTTTTATAATTAACTGAACACATAAAGGTGTAGCAGACAGAGCCATCATGTGCAAATATATAGAACAACGAATGTGCAGATATAATTGTGTTTGAGTTGAATGAATAGGAAAAAAAGGTGGGAGGAGGAAGAAGAAGAAGGAGAAGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGTGTGTATATATATATATATTCAAATTATTATATAATCATTTTTATTATTATTTTATTGATATATAATAATTAATGTGTTTGGAAATTGGTGGGGCGATAATTGATAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

mRNA sequence

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

Coding sequence (CDS)

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

Protein sequence

MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPVEEIKSPPPEQPITHPVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL

Homology

[Close]

BLAST of Pay0005910 vs. ExPASy Swiss-Prot
Match: Q9SGE3 (Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30
Identity = 97/252 (38.49%), Postives = 139/252 (55.16%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVE-------------KESQDLT--------- 60
           M PR+ + V    V    +VVEET++V V E             +E+QDLT         
Sbjct: 1   MAPRKPKVV---SVTKKKKVVEETIKVTVTEEGDPCVITETANDQETQDLTFSIPVGENV 60

Query: 61  -------QEPDTAETADGGGEMFRRPVPVE--------------EIKSPPPEQPITHPVS 120
                  + PD   +   G  +    +PV+              E++  P  QP   P S
Sbjct: 61  TTVEIPVEVPD-ERSLPVGENVTTVKIPVDDRDESSPQPPETPVEVRDEPSPQPPETPAS 120

Query: 121 ENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGIS 180
           ++    + TD   +      K+E K+ K++ K    +G E Y+RYV+KV+KQVHP++GI+
Sbjct: 121 KSEGTLKKTDKVEK------KQENKKKKKKKKRDDLAGDE-YRRYVYKVMKQVHPDLGIT 180

Query: 181 GQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGT 210
            +AM ++N FM DMF+R+A+EA +LS YT   TLSSREI+ AVRLVLPGEL +HA+AEG+
Sbjct: 181 SKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRLVLPGELSRHAVAEGS 240

[Close]

BLAST of Pay0005910 vs. ExPASy Swiss-Prot
Match: P05621 (Histone H2B.2 OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 4.1e-28
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 71  PITHPVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGR-------------- 130
           P   P +EN +V +A + T    +  A++ +  GK  SK + G G+              
Sbjct: 2   PBKKPAAEN-KVEKAAEKTPAGKKPKAEKRLPAGKTASKEAGGEGKTRGRKKGSKAKKGV 61

Query: 131 EGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREI 190
           E YK Y+FKVLKQVHP+IGIS +AM I+N+F+ND+F++LA E+ KL++Y    T++SREI
Sbjct: 62  ETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREI 121

Query: 191 QGAVRLVLPGELGKHAIAEGTKAVSNYVS 206
           Q +VRLVLPGEL KHA++EGTKAV+ + S
Sbjct: 122 QTSVRLVLPGELAKHAVSEGTKAVTKFTS 149

[Close]

BLAST of Pay0005910 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 125.9 bits (315), Expect = 5.4e-28
Identity = 60/102 (58.82%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 104 GKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLS 163
           G  + K  S    E YK Y+FKVLKQVHP++GISG+AM I+N+F+ND+F++LA+E++KL+
Sbjct: 37  GSEKKKKKSKKSVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLA 96

Query: 164 KYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVS 206
           +Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Sbjct: 97  RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Pay0005910 vs. ExPASy Swiss-Prot
Match: Q43217 (Histone H2B.3 OS=Triticum aestivum OX=4565 PE=1 SV=3)

HSP 1 Score: 125.6 bits (314), Expect = 7.0e-28
Identity = 70/133 (52.63%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 75  PVSENFEVRRATDSTSQLTEDTAKRE--IKEGKRRSKNSSGSGREGYKRYVFKVLKQVHP 134
           PV+E  E   A   T       A +E   K+GK++SK S     E YK Y+FKVLKQVHP
Sbjct: 9   PVAEKAEKTTAAKKTKAEKRPPASKEGGDKKGKKKSKKSV----ETYKIYIFKVLKQVHP 68

Query: 135 EIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHA 194
           +IGIS +AM I+N+F+ND+F++LA E+ KL++Y    T++SREIQ +VRLVLPGEL KHA
Sbjct: 69  DIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHA 128

Query: 195 IAEGTKAVSNYVS 206
           ++EGTKAV+ + S
Sbjct: 129 VSEGTKAVTKFTS 137

[Close]

BLAST of Pay0005910 vs. ExPASy Swiss-Prot
Match: O65819 (Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 68/131 (51.91%), Postives = 96/131 (73.28%), Query Frame = 0


Query: 75  PVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEI 134
           PV+E     +   +  +L +D A  + K  K+RSK +     E YK Y+FKVLKQVHP+I
Sbjct: 12  PVAEKAPAEKKPKAGKKLPKDAAAGDKK--KKRSKKAV----ETYKIYIFKVLKQVHPDI 71

Query: 135 GISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIA 194
           GIS +AM I+N+F+ND+F++LA+EA++L++Y    T++SREIQ AVRLVLPGEL KHA++
Sbjct: 72  GISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVS 131

Query: 195 EGTKAVSNYVS 206
           EGTKAV+ + S
Sbjct: 132 EGTKAVTKFTS 136

[Close]

BLAST of Pay0005910 vs. ExPASy TrEMBL
Match: A0A1S3CH74 (histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.6e-105
Identity = 216/241 (89.63%), Postives = 216/241 (89.63%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSP-PPEQPITHPVSENFEVRRATDSTSQLTEDTA---------------------- 120
           EEIKSP PPEQPITHPVSENFEVRRATDSTSQLTEDTA                      
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120

Query: 121 --KREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
             KREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 217
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240

[Close]

BLAST of Pay0005910 vs. ExPASy TrEMBL
Match: A0A0A0LSH9 (Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 200/241 (82.99%), Postives = 206/241 (85.48%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPD AET DGGGEMFRR VPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDMAETPDGGGEMFRRTVPV 60

Query: 61  EEIKSPPPEQPITHPVSENFEVRRATDSTSQLTEDTA----------------------- 120
           EEIK+  P+QPI+HPVSE+FE+RRATDSTSQLTEDTA                       
Sbjct: 61  EEIKA-HPQQPISHPVSEDFELRRATDSTSQLTEDTAVTPEMEPKIRKGKKGRRRRKKKK 120

Query: 121 --KREIKEGKRRSKNS-SGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQR 180
             KREIKEGKRRSK S  G GREGYKRYVFKVLKQVHPE+GISGQAMLILNNFMNDMFQR
Sbjct: 121 EKKREIKEGKRRSKKSGGGGGREGYKRYVFKVLKQVHPEVGISGQAMLILNNFMNDMFQR 180

Query: 181 LAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSK 216
           LAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNR TKSK
Sbjct: 181 LAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRATKSK 240

[Close]

BLAST of Pay0005910 vs. ExPASy TrEMBL
Match: A0A5A7UF12 (Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00860 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 194/217 (89.40%), Postives = 195/217 (89.86%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSP-PPEQPITHPVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGY 120
           EEIKSP PPEQPITHPVSENFEVRRATDSTSQLTEDTA     E                
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEP--------------- 120

Query: 121 KRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180
           +RYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA
Sbjct: 121 ERYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180

Query: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 217
           VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL
Sbjct: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 202

[Close]

BLAST of Pay0005910 vs. ExPASy TrEMBL
Match: A0A5D3BHX3 (Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00310 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.7e-89
Identity = 189/217 (87.10%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSP-PPEQPITHPVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGY 120
           EEIKSP PPEQPITHPVSENFEVRRATDSTSQLTEDTA     E                
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEP--------------- 120

Query: 121 KRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180
                +VLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA
Sbjct: 121 -----EVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180

Query: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 217
           VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL
Sbjct: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 197

[Close]

BLAST of Pay0005910 vs. ExPASy TrEMBL
Match: A0A6J1FBI7 (histone H2B.6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443927 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.8e-66
Identity = 155/230 (67.39%), Postives = 174/230 (75.65%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRR+VGSVVRTTT+VVEETV VAVVE ESQD+TQEP TAET  GG  +FRR +PV
Sbjct: 1   MPPRRSRRIVGSVVRTTTKVVEETVHVAVVEGESQDVTQEPATAET--GGDGVFRRTIPV 60

Query: 61  EEIKSPPPEQPITHPVSENFEVRRATDSTSQLTED---TAKREIK--EGKRRS------- 120
           E+        P T PV  + ++ R  DSTS++TED   T K E K  +G R S       
Sbjct: 61  ED--------PQTSPVWGDVKLTRPVDSTSEVTEDKDVTGKMESKARDGVRESRKKNEKK 120

Query: 121 ------KNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKL 180
                 K  SG GREGYKRYVFKVLKQVHPE+GISGQAM+ILNN MNDMF+RLAEEATKL
Sbjct: 121 KEREVKKRRSGGGREGYKRYVFKVLKQVHPEVGISGQAMVILNNLMNDMFERLAEEATKL 180

Query: 181 SKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTK 213
           SKYTGG TLSSREIQGAV+LV PGELGKHA+AEGTKAVS YVSY +R T+
Sbjct: 181 SKYTGGQTLSSREIQGAVKLVFPGELGKHAVAEGTKAVSTYVSYDHRRTQ 220

[Close]

BLAST of Pay0005910 vs. NCBI nr
Match: XP_008462313.1 (PREDICTED: histone H2B type 1-A-like [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 216/241 (89.63%), Postives = 216/241 (89.63%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSP-PPEQPITHPVSENFEVRRATDSTSQLTEDTA---------------------- 120
           EEIKSP PPEQPITHPVSENFEVRRATDSTSQLTEDTA                      
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKK 120

Query: 121 --KREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
             KREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 EKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 217
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240

[Close]

BLAST of Pay0005910 vs. NCBI nr
Match: XP_031736247.1 (histone H2B [Cucumis sativus] >KGN64870.1 hypothetical protein Csa_022747 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 200/241 (82.99%), Postives = 206/241 (85.48%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPD AET DGGGEMFRR VPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDMAETPDGGGEMFRRTVPV 60

Query: 61  EEIKSPPPEQPITHPVSENFEVRRATDSTSQLTEDTA----------------------- 120
           EEIK+  P+QPI+HPVSE+FE+RRATDSTSQLTEDTA                       
Sbjct: 61  EEIKA-HPQQPISHPVSEDFELRRATDSTSQLTEDTAVTPEMEPKIRKGKKGRRRRKKKK 120

Query: 121 --KREIKEGKRRSKNS-SGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQR 180
             KREIKEGKRRSK S  G GREGYKRYVFKVLKQVHPE+GISGQAMLILNNFMNDMFQR
Sbjct: 121 EKKREIKEGKRRSKKSGGGGGREGYKRYVFKVLKQVHPEVGISGQAMLILNNFMNDMFQR 180

Query: 181 LAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSK 216
           LAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNR TKSK
Sbjct: 181 LAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRATKSK 240

[Close]

BLAST of Pay0005910 vs. NCBI nr
Match: KAA0052101.1 (histone H2B type 1-A-like [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92
Identity = 194/217 (89.40%), Postives = 195/217 (89.86%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSP-PPEQPITHPVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGY 120
           EEIKSP PPEQPITHPVSENFEVRRATDSTSQLTEDTA     E                
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEP--------------- 120

Query: 121 KRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180
           +RYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA
Sbjct: 121 ERYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180

Query: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 217
           VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL
Sbjct: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 202

[Close]

BLAST of Pay0005910 vs. NCBI nr
Match: TYJ98095.1 (histone H2B type 1-A-like [Cucumis melo var. makuwa])

HSP 1 Score: 337.0 bits (863), Expect = 1.2e-88
Identity = 189/217 (87.10%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSP-PPEQPITHPVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGY 120
           EEIKSP PPEQPITHPVSENFEVRRATDSTSQLTEDTA     E                
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEP--------------- 120

Query: 121 KRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180
                +VLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA
Sbjct: 121 -----EVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGA 180

Query: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 217
           VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL
Sbjct: 181 VRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL 197

[Close]

BLAST of Pay0005910 vs. NCBI nr
Match: XP_038894659.1 (LOW QUALITY PROTEIN: histone H2B-like [Benincasa hispida])

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-80
Identity = 176/232 (75.86%), Postives = 194/232 (83.62%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADG-GGEMFRRPVP 60
           MPPRRSRRVVGSVVRTTTR+VEETVQVAV+EKESQDLTQEP+T +TA+G GG++FRR +P
Sbjct: 1   MPPRRSRRVVGSVVRTTTRMVEETVQVAVLEKESQDLTQEPETTQTAEGRGGDVFRRTIP 60

Query: 61  VEEIKSPPPEQPITHPVSENFEVRRATDSTSQLTEDTA-------------------KRE 120
           VEE K+PP EQP T PVSE+F+ R+ TDSTSQLTEDTA                   K+ 
Sbjct: 61  VEE-KAPPREQPKTFPVSEDFDTRKPTDSTSQLTEDTAATPEVEPEVRNGKKGRKRKKKM 120

Query: 121 IKEGKRRSKNS-SGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEA 180
            KEGKRR K+S  G GREGYKRYVFKVLKQVHPEIGISG+AM+ILNNFMNDMFQRLA+EA
Sbjct: 121 EKEGKRRRKSSGGGGGREGYKRYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEA 180

Query: 181 TKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTT 212
           TKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVS YVSY +  T
Sbjct: 181 TKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT 231

[Close]

BLAST of Pay0005910 vs. TAIR 10
Match: AT1G08170.1 (Histone superfamily protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 97/252 (38.49%), Postives = 139/252 (55.16%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVE-------------KESQDLT--------- 60
           M PR+ + V    V    +VVEET++V V E             +E+QDLT         
Sbjct: 1   MAPRKPKVV---SVTKKKKVVEETIKVTVTEEGDPCVITETANDQETQDLTFSIPVGENV 60

Query: 61  -------QEPDTAETADGGGEMFRRPVPVE--------------EIKSPPPEQPITHPVS 120
                  + PD   +   G  +    +PV+              E++  P  QP   P S
Sbjct: 61  TTVEIPVEVPD-ERSLPVGENVTTVKIPVDDRDESSPQPPETPVEVRDEPSPQPPETPAS 120

Query: 121 ENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGIS 180
           ++    + TD   +      K+E K+ K++ K    +G E Y+RYV+KV+KQVHP++GI+
Sbjct: 121 KSEGTLKKTDKVEK------KQENKKKKKKKKRDDLAGDE-YRRYVYKVMKQVHPDLGIT 180

Query: 181 GQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGT 210
            +AM ++N FM DMF+R+A+EA +LS YT   TLSSREI+ AVRLVLPGEL +HA+AEG+
Sbjct: 181 SKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRLVLPGELSRHAVAEGS 240

[Close]

BLAST of Pay0005910 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.8e-29
Identity = 60/102 (58.82%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 104 GKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLS 163
           G  + K  S    E YK Y+FKVLKQVHP++GISG+AM I+N+F+ND+F++LA+E++KL+
Sbjct: 37  GSEKKKKKSKKSVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLA 96

Query: 164 KYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVS 206
           +Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Sbjct: 97  RYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Pay0005910 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 63/109 (57.80%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 98  KREIKE-GKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLA 157
           K+  KE G  + K  S    E YK Y+FKVLKQVHP+IGISG+AM I+N+F+ND+F++LA
Sbjct: 29  KKITKEGGSEKKKKKSKKNIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLA 88

Query: 158 EEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVS 206
           +E+++L++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + S
Sbjct: 89  QESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTS 137

[Close]

BLAST of Pay0005910 vs. TAIR 10
Match: AT5G02570.1 (Histone superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 63/121 (52.07%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 85  ATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLIL 144
           A  +  ++ ++    EI + K+++K S+    E YK Y+FKVLKQVHP+IGISG+AM I+
Sbjct: 15  APKAEKKIAKEGGTSEIVKKKKKTKKST----ETYKIYIFKVLKQVHPDIGISGKAMGIM 74

Query: 145 NNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYV 204
           N+F+ND+F++LA+E+++L++Y    T++SREIQ AVRLVLPGEL KHA++EGTKAV+ + 
Sbjct: 75  NSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFT 131

Query: 205 S 206
           S
Sbjct: 135 S 131

[Close]

BLAST of Pay0005910 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 68/143 (47.55%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 64  KSPPPEQPITH-PVSENFEVRRATDSTSQLTEDTAKREIKEGKRRSKNSSGSGREGYKRY 123
           K P  ++P +  PV E  +  +A             +E   G  + K       E YK Y
Sbjct: 7   KKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKIY 66

Query: 124 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 183
           +FKVLKQVHP+IGIS +AM I+N+F+ND+F++LA+EA+KL++Y    T++SREIQ AVRL
Sbjct: 67  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRL 126

Query: 184 VLPGELGKHAIAEGTKAVSNYVS 206
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 127 VLPGELAKHAVSEGTKAVTKFTS 149

The following BLAST results are available for this feature:

BLAST of Pay0005910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGE3	1.5e-30	38.49	Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1	[more]
P05621	4.1e-28	46.98	Histone H2B.2 OS=Triticum aestivum OX=4565 PE=1 SV=2	[more]
Q9ZUS0	5.4e-28	58.82	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
Q43217	7.0e-28	52.63	Histone H2B.3 OS=Triticum aestivum OX=4565 PE=1 SV=3	[more]
O65819	1.2e-27	51.91	Histone H2B.3 (Fragment) OS=Solanum lycopersicum OX=4081 GN=H2B-3 PE=2 SV=1	[more]

BLAST of Pay0005910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CH74	5.6e-105	89.63	histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1	[more]
A0A0A0LSH9	1.2e-94	82.99	Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=...	[more]
A0A5A7UF12	1.1e-92	89.40	Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3BHX3	5.7e-89	87.10	Histone H2B type 1-A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1FBI7	1.8e-66	67.39	histone H2B.6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443927 PE=3...	[more]

BLAST of Pay0005910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462313.1	1.2e-104	89.63	PREDICTED: histone H2B type 1-A-like [Cucumis melo]	[more]
XP_031736247.1	2.4e-94	82.99	histone H2B [Cucumis sativus] >KGN64870.1 hypothetical protein Csa_022747 [Cucum...	[more]
KAA0052101.1	2.3e-92	89.40	histone H2B type 1-A-like [Cucumis melo var. makuwa]	[more]
TYJ98095.1	1.2e-88	87.10	histone H2B type 1-A-like [Cucumis melo var. makuwa]	[more]
XP_038894659.1	2.0e-80	75.86	LOW QUALITY PROTEIN: histone H2B-like [Benincasa hispida]	[more]

BLAST of Pay0005910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08170.1	1.1e-31	38.49	Histone superfamily protein	[more]
AT2G37470.1	3.8e-29	58.82	Histone superfamily protein	[more]
AT3G53650.1	1.1e-28	57.80	Histone superfamily protein	[more]
AT5G02570.1	1.1e-28	52.07	Histone superfamily protein	[more]
AT5G59910.1	1.9e-28	47.55	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 160..177 score: 46.4 coord: 138..158 score: 50.75 coord: 177..190 score: 78.23 coord: 190..203 score: 69.32 coord: 119..137 score: 69.92
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 105..205 e-value: 4.9E-45 score: 165.6
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 83..207
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 81..182 e-value: 4.0E-17 score: 62.8
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 80..206 e-value: 4.7E-46 score: 157.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 96..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..114
None	No IPR available	PANTHER	PTHR23428:SF238	HISTONE H2B.2	coord: 83..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005910.1	Pay0005910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity