Pay0005558 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005558
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transcription termination factor MTERF5
Location	chr10: 4664247 .. 4665790 (-)
RNA-Seq Expression	Pay0005558
Synteny	Pay0005558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTCAAAACCCCAACCAAAACCCTTACTTCATTTTCTTCAATCCCATCCCCAAATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAGAAACGTTCTTTCAATACCGTTTCTACTTCTACGTTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTTTTCAGCATCGCCTACTTCCAAAGGTCGAAAGCTCCAATTCCATGAAAAAACATCCAGGAGTATGAAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGAATTCACATATCGCCAAGTTGGTCTCGAAGCAACCTTCAATCCTTCAATCCATAGTATCCACCAATTTGAAGCCTAAATTTGATTTCCTCCAGGAAATCGGGATCGTCGGTCCTTTACTTCCTAAGGTAATTCTATCGAACCCTGGAATTCTTTTTAGGAGCGTAAATTCTCAGTTGAAACCAACATTTCGTCTCATAAAGGAAATGCTTGAATCGGATGAAAAGGTAACTGCTGCTATTTGTCGTGCTTCGTGGATTCTAAGTGCTAATTCCAAGGGTACTATGCGATCTAACTTTGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGAAAATGATTGCATTGAACCCTAGAAGTATTATGCGAAATGTTGGTAGAATGATTCATGCAGTGAAAACGGTTAAAGAATCAGGCGTTGAACCAAAGGATCGTGCGTTTGTTTATGCAGTTAGTGCAGTGGGTTCTATGAATCATTCAAGTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCCTTTAAGAGATATCCACTTTGTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCTTAATTTCTTACCCTGTGTTCTTCAATTTGTCAGTCGACAAGCGACTCCGACCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCGTCAAGAACAAAAAGATTGCTCTTACTGGGTGGTTTATGCAAGGGGAGAGAGAATTTGTGAAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGGCGCATCTGAAACCAAATCTGTTTCATAGGATTGGAAAGTTGTAAGTTAAAATGTTCTTAAAGTCTAAATTTGAGCATCATGATCTTCAAAGGTGAGAGCACTTTTGTTGTTATTGCGCCTATTGTTCTGTTTCAAATAACACTGCTTCTCGAGGTTTTCAAATGGGAGAATTGTGTTGTCTTCCATCCAAATGAAGGCAGTTAGTTAGGTAAATCTATTTGGTGTATATTTGTTCATAGACATGTTAATCTTGAAGTTGAATCCAATGATGATGTTGAAATGGGATGAGAGACATGAGAGTTGTAGATAAACTTTCTGCTTTGTCTGTTTTAATGTAGAGGAGATTTGGGTATTGTAGTAGAAGGGATGTAATACACAATACATATCCAT

mRNA sequence

GAATTCAAAACCCCAACCAAAACCCTTACTTCATTTTCTTCAATCCCATCCCCAAATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAGAAACGTTCTTTCAATACCGTTTCTACTTCTACGTTGCCTTTAGCCTCCGTTTCTACCATCCAATTCCTCACAAATTCATGTGGCCTTTTTTCAGCATCGCCTACTTCCAAAGGTCGAAAGCTCCAATTCCATGAAAAAACATCCAGGAGTATGAAGCCGTTATCGGTTTCTTCAAATCACATGGATTCGAGAATTCACATATCGCCAAGTTGGTCTCGAAGCAACCTTCAATCCTTCAATCCATAGTATCCACCAATTTGAAGCCTAAATTTGATTTCCTCCAGGAAATCGGGATCGTCGGTCCTTTACTTCCTAAGGTAATTCTATCGAACCCTGGAATTCTTTTTAGGAGCGTAAATTCTCAGTTGAAACCAACATTTCGTCTCATAAAGGAAATGCTTGAATCGGATGAAAAGGTAACTGCTGCTATTTGTCGTGCTTCGTGGATTCTAAGTGCTAATTCCAAGGGTACTATGCGATCTAACTTTGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGAAAATGATTGCATTGAACCCTAGAAGTATTATGCGAAATGTTGGTAGAATGATTCATGCAGTGAAAACGGTTAAAGAATCAGGCGTTGAACCAAAGGATCGTGCGTTTGTTTATGCAGTTAGTGCAGTGGGTTCTATGAATCATTCAAGTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCCTTTAAGAGATATCCACTTTGTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCTTAATTTCTTACCCTGTGTTCTTCAATTTGTCAGTCGACAAGCGACTCCGACCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCGTCAAGAACAAAAAGATTGCTCTTACTGGGTGGTTTATGCAAGGGGAGAGAGAATTTGTGAAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGGCGCATCTGAAACCAAATCTGTTTCATAGGATTGGAAAGTTGTAAGTTAAAATGTTCTTAAAGTCTAAATTTGAGCATCATGATCTTCAAAGGTGAGAGCACTTTTGTTGTTATTGCGCCTATTGTTCTGTTTCAAATAACACTGCTTCTCGAGGTTTTCAAATGGGAGAATTGTGTTGTCTTCCATCCAAATGAAGGCAGTTAGTTAGGTAAATCTATTTGGTGTATATTTGTTCATAGACATGTTAATCTTGAAGTTGAATCCAATGATGATGTTGAAATGGGATGAGAGACATGAGAGTTGTAGATAAACTTTCTGCTTTGTCTGTTTTAATGTAGAGGAGATTTGGGTATTGTAGTAGAAGGGATGTAATACACAATACATATCCAT

Coding sequence (CDS)

ATGCTTGAATCGGATGAAAAGGTAACTGCTGCTATTTGTCGTGCTTCGTGGATTCTAAGTGCTAATTCCAAGGGTACTATGCGATCTAACTTTGATGTTTTGGTCAGTGAAGGAGTACCTTCTACGAATATAGCGAAAATGATTGCATTGAACCCTAGAAGTATTATGCGAAATGTTGGTAGAATGATTCATGCAGTGAAAACGGTTAAAGAATCAGGCGTTGAACCAAAGGATCGTGCGTTTGTTTATGCAGTTAGTGCAGTGGGTTCTATGAATCATTCAAGTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCCTTTAAGAGATATCCACTTTGTTTAACTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCTTAATTTCTTACCCTGTGTTCTTCAATTTGTCAGTCGACAAGCGACTCCGACCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTCGTCAAGAACAAAAAGATTGCTCTTACTGGGTGGTTTATGCAAGGGGAGAGAGAATTTGTGAAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGGCGCATCTGAAACCAAATCTGTTTCATAG

Protein sequence

MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLVKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS

Homology

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BLAST of Pay0005558 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.8e-05
Identity = 41/179 (22.91%), Postives = 86/179 (48.04%), Query Frame = 0


Query: 5   DEKVTAAICRASWILSANSKGTMRSNFDVLVSE-GVPSTNIAKMIALNPRSIMR--NVGR 64
           + K+   +     + S + + ++R     L+ E G+  T++ K++ L+P+ +++  ++  
Sbjct: 269 NSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITW 328

Query: 65  MIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSS----WKKKINVMKSLGWSEKEIFTAF 124
               +   KE G  P+D + V  V     + H S    +  +IN ++S+G    +I    
Sbjct: 329 NTRYMFLSKELGA-PRD-SVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVL 388

Query: 125 KRYPLCLTCS-EEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLK 176
                 L+ S E+ ++    +  N    +   L  YP++ +LS+D+R+RPR++ L  LK
Sbjct: 389 TSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELK 445

[Close]

BLAST of Pay0005558 vs. ExPASy TrEMBL
Match: A0A5D3CWN7 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002840 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 9.8e-124
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKVT AICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG
Sbjct: 147 MLESDEKVTVAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 206

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           RMIHAVKTVKE GVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY
Sbjct: 207 RMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 266

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNL+
Sbjct: 267 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLL 326

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS
Sbjct: 327 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 375

[Close]

BLAST of Pay0005558 vs. ExPASy TrEMBL
Match: A0A1S3BH03 (uncharacterized protein LOC103489540 OS=Cucumis melo OX=3656 GN=LOC103489540 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 9.8e-124
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKVT AICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG
Sbjct: 1   MLESDEKVTVAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           RMIHAVKTVKE GVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY
Sbjct: 61  RMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNL+
Sbjct: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLL 180

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS
Sbjct: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 229

[Close]

BLAST of Pay0005558 vs. ExPASy TrEMBL
Match: A0A5A7SU45 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002650 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104
Identity = 199/229 (86.90%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKV AAICRASWILSANSKGTMRSN DVLVSEGVPSTNIAKMIALNPRSIMRNV 
Sbjct: 147 MLESDEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVD 206

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           R+IHAVKTVKE GVEPKDR FVYAVSAVGSM+ SSWKKKINVMKSLGWSEKEIFTAFK+ 
Sbjct: 207 RIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKD 266

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           P  LTCSEEKMRDVADFCFNTAKLDP ++I YP FF  SVDKRL+PRYKV EVLKVKNL+
Sbjct: 267 PTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLL 326

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNK IA   WF++GEREFV+NNVVKHLDEIPNLMDIYRGN ASETKSVS
Sbjct: 327 KNKNIA--RWFIRGEREFVENNVVKHLDEIPNLMDIYRGNDASETKSVS 373

[Close]

BLAST of Pay0005558 vs. ExPASy TrEMBL
Match: A0A1S3BDZ4 (uncharacterized protein LOC103488851 OS=Cucumis melo OX=3656 GN=LOC103488851 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104
Identity = 199/229 (86.90%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKV AAICRASWILSANSKGTMRSN DVLVSEGVPSTNIAKMIALNPRSIMRNV 
Sbjct: 1   MLESDEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVD 60

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           R+IHAVKTVKE GVEPKDR FVYAVSAVGSM+ SSWKKKINVMKSLGWSEKEIFTAFK+ 
Sbjct: 61  RIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKD 120

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           P  LTCSEEKMRDVADFCFNTAKLDP ++I YP FF  SVDKRL+PRYKV EVLKVKNL+
Sbjct: 121 PTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLL 180

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNK IA   WF++GEREFV+NNVVKHLDEIPNLMDIYRGN ASETKSVS
Sbjct: 181 KNKNIA--RWFIRGEREFVENNVVKHLDEIPNLMDIYRGNDASETKSVS 227

[Close]

BLAST of Pay0005558 vs. ExPASy TrEMBL
Match: A0A5A7SSR2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001230 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.0e-97
Identity = 183/229 (79.91%), Postives = 200/229 (87.34%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           ML SDE+VTAAICRASW+L+ + KG ++SNFDVLVSEGVPS NIAKMIA NPR+IM+ V 
Sbjct: 147 MLGSDERVTAAICRASWLLTYDFKGVIKSNFDVLVSEGVPSRNIAKMIAWNPRTIMQRVD 206

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           +MI  VK VKE G+EPK   F  AV     M+ S+WKKKINVMKSLGWSEKEI TAFKRY
Sbjct: 207 KMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDSTWKKKINVMKSLGWSEKEILTAFKRY 266

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           PLCLTCSEEKMRDVADFCFNTAKLDPGTLIS PVFF LSV+KRLRPRYKVLEVLKVKNL+
Sbjct: 267 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPVFFKLSVNKRLRPRYKVLEVLKVKNLL 326

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           +NKKIAL  WFMQGEREFV+NNVVKHLDEIPNLMDIYRGN ASET+SVS
Sbjct: 327 RNKKIALAWWFMQGEREFVENNVVKHLDEIPNLMDIYRGNDASETQSVS 375

[Close]

BLAST of Pay0005558 vs. NCBI nr
Match: KAA0034139.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKVT AICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG
Sbjct: 147 MLESDEKVTVAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 206

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           RMIHAVKTVKE GVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY
Sbjct: 207 RMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 266

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNL+
Sbjct: 267 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLL 326

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS
Sbjct: 327 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 375

[Close]

BLAST of Pay0005558 vs. NCBI nr
Match: XP_008446996.1 (PREDICTED: uncharacterized protein LOC103489540 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKVT AICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG
Sbjct: 1   MLESDEKVTVAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           RMIHAVKTVKE GVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY
Sbjct: 61  RMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNL+
Sbjct: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLL 180

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS
Sbjct: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 229

[Close]

BLAST of Pay0005558 vs. NCBI nr
Match: KAA0034158.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-104
Identity = 199/229 (86.90%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKV AAICRASWILSANSKGTMRSN DVLVSEGVPSTNIAKMIALNPRSIMRNV 
Sbjct: 147 MLESDEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVD 206

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           R+IHAVKTVKE GVEPKDR FVYAVSAVGSM+ SSWKKKINVMKSLGWSEKEIFTAFK+ 
Sbjct: 207 RIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKD 266

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           P  LTCSEEKMRDVADFCFNTAKLDP ++I YP FF  SVDKRL+PRYKV EVLKVKNL+
Sbjct: 267 PTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLL 326

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNK IA   WF++GEREFV+NNVVKHLDEIPNLMDIYRGN ASETKSVS
Sbjct: 327 KNKNIA--RWFIRGEREFVENNVVKHLDEIPNLMDIYRGNDASETKSVS 373

[Close]

BLAST of Pay0005558 vs. NCBI nr
Match: XP_008445985.1 (PREDICTED: uncharacterized protein LOC103488851 [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-104
Identity = 199/229 (86.90%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           MLESDEKV AAICRASWILSANSKGTMRSN DVLVSEGVPSTNIAKMIALNPRSIMRNV 
Sbjct: 1   MLESDEKVAAAICRASWILSANSKGTMRSNIDVLVSEGVPSTNIAKMIALNPRSIMRNVD 60

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           R+IHAVKTVKE GVEPKDR FVYAVSAVGSM+ SSWKKKINVMKSLGWSEKEIFTAFK+ 
Sbjct: 61  RIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDSSWKKKINVMKSLGWSEKEIFTAFKKD 120

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           P  LTCSEEKMRDVADFCFNTAKLDP ++I YP FF  SVDKRL+PRYKV EVLKVKNL+
Sbjct: 121 PTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPKFFQCSVDKRLKPRYKVFEVLKVKNLL 180

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           KNK IA   WF++GEREFV+NNVVKHLDEIPNLMDIYRGN ASETKSVS
Sbjct: 181 KNKNIA--RWFIRGEREFVENNVVKHLDEIPNLMDIYRGNDASETKSVS 227

[Close]

BLAST of Pay0005558 vs. NCBI nr
Match: KAA0034132.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 183/229 (79.91%), Postives = 200/229 (87.34%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           ML SDE+VTAAICRASW+L+ + KG ++SNFDVLVSEGVPS NIAKMIA NPR+IM+ V 
Sbjct: 147 MLGSDERVTAAICRASWLLTYDFKGVIKSNFDVLVSEGVPSRNIAKMIAWNPRTIMQRVD 206

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           +MI  VK VKE G+EPK   F  AV     M+ S+WKKKINVMKSLGWSEKEI TAFKRY
Sbjct: 207 KMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDSTWKKKINVMKSLGWSEKEILTAFKRY 266

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           PLCLTCSEEKMRDVADFCFNTAKLDPGTLIS PVFF LSV+KRLRPRYKVLEVLKVKNL+
Sbjct: 267 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPVFFKLSVNKRLRPRYKVLEVLKVKNLL 326

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNGASETKSVS 230
           +NKKIAL  WFMQGEREFV+NNVVKHLDEIPNLMDIYRGN ASET+SVS
Sbjct: 327 RNKKIALAWWFMQGEREFVENNVVKHLDEIPNLMDIYRGNDASETQSVS 375

[Close]

BLAST of Pay0005558 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 125.2 bits (313), Expect = 6.9e-29
Identity = 70/220 (31.82%), Postives = 116/220 (52.73%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           +L+SDEK+ AA+ R +W+   +    +  N + +   GVP   I  ++   P ++M+   
Sbjct: 183 VLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNH 242

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAV-GSMNHSSWKKKINVMKSLGWSEKEIFTAFKR 120
                 K  +E G  P+   FV A+ A+ G  N S W K   V +  GWSE +I  AFK+
Sbjct: 243 EFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKK 302

Query: 121 YPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNL 180
           +P C+  SE K+    ++  N   + P ++   PV    S++KR+ PR  V +VL    L
Sbjct: 303 HPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGL 362

Query: 181 VKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRG 220
           VK +  +LT   +  E+ F++  V+K+ +E+P LM++Y G
Sbjct: 363 VK-EDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of Pay0005558 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-21
Identity = 58/220 (26.36%), Postives = 105/220 (47.73%), Query Frame = 0


Query: 1   MLESDEKVTAAICRASWILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVG 60
           +L  +E V   + R     S      +     +    GVP  +I  ++  +P +      
Sbjct: 170 ILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRER 229

Query: 61  RMIHAVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRY 120
           R    +  V   G +PK   FV+A+ A    + S+ ++K  + +  GWS+++   A  R+
Sbjct: 230 RFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRF 289

Query: 121 PLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV 180
           P C+T S+EK+    ++  N   L    +++ PV  +LS++KR++PR +V+ +L  K LV
Sbjct: 290 PNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLV 349

Query: 181 KNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGN 221
           K + I           EF+   V+K+ DE+P L+  +  N
Sbjct: 350 KKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of Pay0005558 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.3e-15
Identity = 54/209 (25.84%), Postives = 101/209 (48.33%), Query Frame = 0


Query: 6   EKVTAAICRASW-ILSANSKGTMRSNFDVLVSEGVPSTNIAKMIALNPRSIMRNVGRMIH 65
           E +   + R  W +LS +    +  N   L + G+  + +A ++   PR    +  ++  
Sbjct: 159 EDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRG 218

Query: 66  AVKTVKESGVEPKDRAFVYAVSAVGSMNHSSWKKKINVMKSLGWSEKEIFTAFKRYPLCL 125
            V    + G     R  V+AV ++ S++  ++ +K+ +  + G+SE EI    +R P  +
Sbjct: 219 YVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLI 278

Query: 126 TCSEEKMRDVADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVLKVKNLV---K 185
            CSE+K+    +F      L+   L   P   + +++KR+ PR KVL++L+ K L+   +
Sbjct: 279 RCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEE 338

Query: 186 NKKIALTGWFMQGEREFVKNNVVKHLDEI 211
            KK  + G     E  F++  VV+  DEI
Sbjct: 339 KKKKNMVGIVEMTEEAFLEKYVVRFGDEI 367

[Close]

BLAST of Pay0005558 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13
Identity = 53/228 (23.25%), Postives = 102/228 (44.74%), Query Frame = 0


Query: 30  NFDVLVSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKESGVEPKDRAFVYAVSAVG 89
           N  VL   G+P   +  ++  + + +     +    +K V E G +P    FV A+  + 
Sbjct: 192 NVSVLRELGMPHKLLFSLLISDSQPVC-GKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 251

Query: 90  SMNHSSWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRD---------------- 149
            MN  + ++K+++ KSLG+   +++++FK++P+ L  SE+KM D                
Sbjct: 252 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 311

Query: 150 -------------------VADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVL 209
                                +F           ++S P  F  S++KR+ PR  V++ L
Sbjct: 312 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 371

Query: 210 KVKNLVKNKKIALTGWFMQGEREFVKNNVVKHLDE--IPNLMDIYRGN 221
             K L++N+  +++   M  ++ F+   V  H+D+  +  LM IYR +
Sbjct: 372 MSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYRAS 418

[Close]

BLAST of Pay0005558 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13
Identity = 53/228 (23.25%), Postives = 102/228 (44.74%), Query Frame = 0


Query: 30  NFDVLVSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKESGVEPKDRAFVYAVSAVG 89
           N  VL   G+P   +  ++  + + +     +    +K V E G +P    FV A+  + 
Sbjct: 192 NVSVLRELGMPHKLLFSLLISDSQPVC-GKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 251

Query: 90  SMNHSSWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRD---------------- 149
            MN  + ++K+++ KSLG+   +++++FK++P+ L  SE+KM D                
Sbjct: 252 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 311

Query: 150 -------------------VADFCFNTAKLDPGTLISYPVFFNLSVDKRLRPRYKVLEVL 209
                                +F           ++S P  F  S++KR+ PR  V++ L
Sbjct: 312 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 371

Query: 210 KVKNLVKNKKIALTGWFMQGEREFVKNNVVKHLDE--IPNLMDIYRGN 221
             K L++N+  +++   M  ++ F+   V  H+D+  +  LM IYR +
Sbjct: 372 MSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYRAS 418

The following BLAST results are available for this feature:

BLAST of Pay0005558 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FM80	6.8e-05	22.91	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Pay0005558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CWN7	9.8e-124	98.69	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BH03	9.8e-124	98.69	uncharacterized protein LOC103489540 OS=Cucumis melo OX=3656 GN=LOC103489540 PE=...	[more]
A0A5A7SU45	1.0e-104	86.90	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDZ4	1.0e-104	86.90	uncharacterized protein LOC103488851 OS=Cucumis melo OX=3656 GN=LOC103488851 PE=...	[more]
A0A5A7SSR2	6.0e-97	79.91	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Pay0005558 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034139.1	2.0e-123	98.69	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 t...	[more]
XP_008446996.1	2.0e-123	98.69	PREDICTED: uncharacterized protein LOC103489540 [Cucumis melo]	[more]
KAA0034158.1	2.1e-104	86.90	transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 t...	[more]
XP_008445985.1	2.1e-104	86.90	PREDICTED: uncharacterized protein LOC103488851 [Cucumis melo]	[more]
KAA0034132.1	1.2e-96	79.91	transcription termination factor MTERF5 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0005558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	6.9e-29	31.82	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.8e-21	26.36	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.3e-15	25.84	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	4.1e-13	23.25	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	4.1e-13	23.25	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 45..75 e-value: 180.0 score: 9.7 coord: 79..109 e-value: 690.0 score: 5.1 coord: 146..177 e-value: 0.24 score: 20.5 coord: 9..40 e-value: 370.0 score: 7.3 coord: 114..145 e-value: 190.0 score: 9.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 24..177 e-value: 3.6E-20 score: 72.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..221
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 3..211 e-value: 3.3E-39 score: 136.6
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 1..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005558.1	Pay0005558.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding