Pay0005527 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005527
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Single-stranded DNA-binding protein
Location	chr02: 437429 .. 443086 (+)
RNA-Seq Expression	Pay0005527
Synteny	Pay0005527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATATGAAGCGAAAGCCTAAAACCCTCCTTCTACCCTGATCGAATCGTCGCTTCCATTTCTGCTCTTTCACAATCAACATGAACTCAGTCACAGCGAGACTCCTCAACCGTTTCAGAATTCCTTCTTCAAATTTTCCCACATCTTCATTTGGTAACTCTCTTTCTCTCTGTCTCACTTTGTTAATTAACGTCTATGTTCTTTCTGTTATTACGACTTGCTTTCGGTTCAGAGCTGAAGGAATTTTGTTTACACTTTTTTTTTTTTTGTTTTGAGTGGCCCAACCAAGAATTTGGCTGTTTTGTGTATTGGGTTTGTTTATCTCAGTGCAATATGTGTGCTGGAGTGATGGCTTGAATAATTATTCAACGTTTGGTTGTAGTGGCAAGTACGCAAACAAGCTCGAAGTTTTGGTTATCCACCGGTGCTTCTGAAAGTGACGTCGATATTGAGAAGAACGATGGAGGAGACGATGATTATGATGCATTTTCTAATGAATTACAACCCCAGGGTGTTGATCCCAGTCGAGGTTGGGGATATCGAGGCGTACATAAGGTATCTCCTCTTTGTCTAAGATGTGTTCCATTTTTTAAAGTTGCGATTTGGAATCTTGTATGCTGGGAATTTTACCCAATAAGTGATCTTTCTGTTCTTGTGATGGTACTTTGTGTATTTTTTGTGATAGTTTTACTTTTTTCAGATTCACGAACTATCCAAAATAAACGACGAAACAGCTCATTTTTTTTTTTTTATTTCTTGTTCTTAGAAAATGTGCCTAATCACTTGCCTTCTCTTGTTGATAAGTTTTGAAGGAAATCTGATGTGTAAGAGAAGCCTCGTGCGTACTATGCGTATTTTAGAAATAATAAGAAGCGGGGGTAGCAATTAAGTGAGTAAGTTTTGTGAGCAATGGCAAGAACAGAAAACTTAGGTGGCTAGAGCTTGAACTTTGAAGTCTGATGTAAGAGAGTAGGAATAACGAATATATGTGTTATATATTGTAAAATTTCAGGTGAGCAAGGAGAACGAGTAGTTTCTTAGCTAGGGAAAGTCTTGTGATTGAGACTTAAGAGGAATGATAGGCAACAAGCAGAGTGAGTGTAGGAGAAACTTGCCTCTGGAACTTCAATTGTTCTGGAATCTTCCCCAATAGTGAAAGAGTTATTCTCACATGATAATTGGATTCATAATCTGCTATTTCTAGACAAATTAGACTGATTATTCTGTTTTACAACGTGATCAAATGTTCACAGGCAATAATTTGTGGAAGGGTTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGGACGATAACAATCTTTACTGTTGGAACAGGAGGGATGTATGACCAACGAATTGTTGATGGAAGAGGTCTGCCGAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACTACTTGGTGCTTATGCAGTTCAAAAACTTTGTAAAAAGTATGATTTGAACTGCTCTTAATAACTGATTTGACTGTATAATTTCACTGACTCTCCGTGGACTTTCAGCGCGTCGGTTTATGTTGAGGGTGACATTGAGACCAGAGTCTACAATGACAGCATCAATGGCGAAGTGAAAAATATTCCAGAAATATGTGTTCGACGTGATGGTATTGCAACACATACTATTATCTTTTTATTTCCTTTTCAATTTTCTTTGGAACTAGTTGAACACTTAATTAATATGAAGTCGTCATTTGGTAACTTCTCTGTTTTCTGCATCTACTTCATTATTTCTTAAATGTCATTTTGAGCACATATTAGAGGGTGTTATTTGACCTTCATAATCATAAGGTTAAGTTATCATATTAATTCCTGTCATTTGTACTTTAGACTTTCCTTTTATTTAAAAACGAACTCCATATTTTTAATAAAGTTTAGTTTTATTGTTTAATAAAGAGAGAGAAAGAGAGATGAGATTCCGATCATCGTTGTCCTCCCCTCCCCCGGCTCCTCACAGCTTACGATATTTCCTCTCCTGATCAACAATGATGAATTCAAGACAGCTCTCAACGAAAATTGAGAATAAATTCTTTACTTGTGAGCTCAATAGAAATAGCAAAGGGAGGGTGATCCGCATATCTGAAACTTGTGGAACATTTTGAAATAGCAAAGGGAGGGCCTTTTTGATTTGGGGTGTCTTTAACTCTCAAGTCCTCTAGCTTAGATGGTATGATTGGAGAGTTTTATAAAAAATCGTGGAACATTTTGAGTAAGGGTGTTCCAACATTTTTTTAAAAATGGAATCATTAATAGAAGGTGCAATGAAACTTATGATAGTCTCATTCCCAAAAAGAAAGAGGAGGTTTGTGTTAGTGACTTCAGACCCATGAGCCTCATAACCTCCTTGTATAAAGTCATCTCTAAGGTGCTTGCGACGAGACTTAAAAAGGTCCTTCCTTCAATAATTAGCGATACTCAAATGGCTTTTGTGGAGGGGAGGCAAATTTTCTTGATGCAATTTTAATAGCTTCGGTGGCCATAGATGAATGGTTTTTAAAAGGCATAAAAGGTTTTCTTTTGAAGCTTGACCTTGAGAAAGCCTACGACAAGGTGGATTGGTCCTTTCTCGATATGGCTATGAAGCTTAAAGACTTTGGTAAGAAATGGAGGAGATGGATTTGGGCTGCTTATCAATGACTAATTTCTCGATCATTGTCAACGACAGGCCTAAGGGAAAGGTATTTGCCAAAAGGGGCATTCGTTAGGAAGATCCACTTGCCCCTTTTCTTTTTACGATTGTGGTAGACACCTTTAGTTGTCTTATTCATTACTGTAACGAGAAGGACCATTAAAGGTTTCCATTTCGATAATCTTCCAGGTGATTTAACCCTCCTTCAGTACGTGGACGATACCCTTATCTTTTCCTCATGGGAGGATGGAAATCTGGAGGCTTGGTGGAGGGTGATTATTATCTTTCTCTTGGGAGCTAGTTTGCTCCTACATGGTGCCAAAACGTCATTAATACCTTGACAGTGCCGATCTGGTTCTTTGGGTTGTATGGTCGATACTCTCCCCTTTAATTACTTGAGTTTCTCTTCTGGAGGGGCCCACAATAGGAAAGAGGCTTTAATTTCTCTTGAGGAGCGGTTTAGGTATAAAATTGATAGATGAAGGAATGTCTCTCCAAAGGTGGTAGATTAACTCTTGCGTAGTTAGTATTGAATACTCTTCCTTGTTATCTGATCTCTCTCGTGCAAGCCTCAGTTGGTGTTATCAATCGAATGGAGAAGATGATCAGGGGTTTTGTCTGGACAGGGGACAACTAAATCGGTTGCCCACCTTGTCAAGTGGGATACTACCTCTCGCCCGATTTGTTATGGCGGCCTTGGGATTGGTTCTTTTAGGCAAAAGAATAATGCTCTTCTCACCAAATGGCTGTGGAGATTTAGTAAGGAAGACAATGCTTTATGGAGACGTTTAATTGTGGCCATCTACGACTTAGAAGAGAATGGTTGGTCTACTAAAGCTTCGAACAGGGGAAGGTCTTATAGGTTATGGGCTGGCATTCTGAAATACAAGGAGATGTTCTTTAATTTCTCGGCCTTTTTGTTGGGAGAGGGAACAAAAATCAGATTTTGGAACTATAGTTGGTGTGAGGCTCAACCCTTGGCAGAAGAATTTCCTGATTTGTTTTCCATTGCGCTGAACAAGGATGCTGATTGATGGTGTAATGTTAGTCACTCTTGGAATTTGGGTCTTTGAAGAAATGTGTCAGATAATGAACTTGACAACGTGGCCACCATTTTGGAAACTCTTCATTCGTGGGCCCCAAACGGATGATTGTGATAGCCTTAAATGGAATCTTATTGCGAAGTCTACCTTTCTTAAATTAACCAAAAGACCCCCCACCATCACTGCACCACTAGTTCATTACATTTGGAAGGTTAAAATTCTGAAAAATGTGAAGTTCTTCTAATGGTCGCTTGCTTATAGAAGTCTTTATTGAAAGTAGAGACAAAGAACACACAAATTTATATGGAAACCCTAGTATAGAGACAAAAACCATGGTGCTAAAGATCTTATTATTTTCTCATAATTCATAAAGGTACAAAGTGGGGAAATTTATAGGCAACACGAGCTTAATTAAAAGAATAAAAAATTAGAGCAAAGTAAATCTTAACTATCTATGGGCTTTCATCATGACCTAAGCCTATTATTTCTAACGGTCTACCACCCAAGAGAAACTTAAAAAAAATTACAGTACATTGAGCTCAGTCCCTCAATATGCTGCCTTTGCTTCAAAGATGAGGAGACCTTGGACTATTTTTTTTTTGCATTGTATCTGTTCTAGGAAAGCTTGGAATACTCTTTATTCGGAAATTTGTTTTTCTTAGTTGGATGCTTGAAGGGCTCAATAGCAGATGATTTAGTTCGAAGGGTAACATTTTATGTAGATGGGCTATCCGTTCCCTCTTGTGGTGTATTTGGAAAGATAGGAATAGTGTAATTTTTTAAGACAACTGTAATTCTTTTGATTCTTTTTGGACTGCGTTTCAACCCATTGCTTCTTGGTGGAGTACGAATTACATTAAACACTTTTGTAATTATAGTCTTTCTATGATTTTCAACAATTGGAAGTCCCTTATTCTTCAATTTTTCTCGGGGAGGGCCCTCTTGTCCCTTGCCCTTAGGCTATTCTCATTTGTTCTTTGAATATATTTGTTTCTTATTCCAAAAAAAAAAAACTTTCTTTTTATTTTGTTTGATTTTCCAAAATGTCTCTAGTATAACAAAAAGTTGACAGTTACTTTACATGACACATTTTTCTTGGACATTAGCACATTTTCTTTGAATGTGAATCATGTGACAGAGAAGTGATGAGTTGTAGTCTAAAGATGGTATCAAGTAAGAAAAAAACTACCAGCATGTGGTAAACTCATAGGCATTTTTGAAATACTGACCCAACGAATTGTAAAAAAAACTAGCCATAGAGACAAAAATAATAATTTATCCTCTAGCCTTAATACGGTGCAAACAGAAAATTACTTACAACCAAGCACAGATAATACTATTGTTACATGTTGGTTCAAATGTCTTCTGTAAAACATATGATTTGGGACTCCTTTTAACTGCCATGCTTCATTTTTGCAGGGATGCTTCGCCTTTTAAAACCTGGAGAAAGTGCCAGCAATTTGTCTTTAGACGATTTGAGTGAGTTTTCCTGTTAACATTTTGTTTATTTGATCACTAACCATGGTAGCAATGCAGTGCATGAAAACTTTTTCATTCTCTGTCAATCTGAGGTGTTGATTTTTTTATGTTTTTGTGACTGACAGAAGAAAGGTTGTTTTCGAACGAGACATAACATATTTTCCAAAAACCTCAATCAGTTGAAGTTTGTGTAGGGGCCCGAGAGAGATGCTGTTAATCGTCATTCAAAGATTGAGCCATGGTTGAGTACTGAACCACCAATCCCTTGTGATCTTTCATGTAATTGTTTATTGACATTGTAGCATTTTTTTTCTTCGAGGCTTTAAGCCACTTTTGTATTGGATTGGTGAGGGATTTTATAGTTCACTAGAGCTGTCACTGCTTCATCCCTTTAATCTTTCTTTAAATGCACTTCTAACAATGAAAGGCATCATAACTTGAAATCCACGGATTAGACATAGTTCAATAGTCATTCACAAG

mRNA sequence

ATAAAATATGAAGCGAAAGCCTAAAACCCTCCTTCTACCCTGATCGAATCGTCGCTTCCATTTCTGCTCTTTCACAATCAACATGAACTCAGTCACAGCGAGACTCCTCAACCGTTTCAGAATTCCTTCTTCAAATTTTCCCACATCTTCATTTGTGGCAAGTACGCAAACAAGCTCGAAGTTTTGGTTATCCACCGGTGCTTCTGAAAGTGACGTCGATATTGAGAAGAACGATGGAGGAGACGATGATTATGATGCATTTTCTAATGAATTACAACCCCAGGGTGTTGATCCCAGTCGAGGTTGGGGATATCGAGGCGTACATAAGGCAATAATTTGTGGAAGGGTTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGGACGATAACAATCTTTACTGTTGGAACAGGAGGGATGTATGACCAACGAATTGTTGATGGAAGAGGTCTGCCGAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACTACTTGGTGCTTATGCAGTTCAAAAACTTTGTAAAAACGCGTCGGTTTATGTTGAGGGTGACATTGAGACCAGAGTCTACAATGACAGCATCAATGGCGAAGTGAAAAATATTCCAGAAATATGTGTTCGACGTGATGGGATGCTTCGCCTTTTAAAACCTGGAGAAAGTGCCAGCAATTTGTCTTTAGACGATTTGAAAGAAAGGTTGTTTTCGAACGAGACATAACATATTTTCCAAAAACCTCAATCAGTTGAAGTTTGTGTAGGGGCCCGAGAGAGATGCTGTTAATCGTCATTCAAAGATTGAGCCATGGTTGAGTACTGAACCACCAATCCCTTGTGATCTTTCATGTAATTGTTTATTGACATTGTAGCATTTTTTTTCTTCGAGGCTTTAAGCCACTTTTGTATTGGATTGGTGAGGGATTTTATAGTTCACTAGAGCTGTCACTGCTTCATCCCTTTAATCTTTCTTTAAATGCACTTCTAACAATGAAAGGCATCATAACTTGAAATCCACGGATTAGACATAGTTCAATAGTCATTCACAAG

Coding sequence (CDS)

ATGAACTCAGTCACAGCGAGACTCCTCAACCGTTTCAGAATTCCTTCTTCAAATTTTCCCACATCTTCATTTGTGGCAAGTACGCAAACAAGCTCGAAGTTTTGGTTATCCACCGGTGCTTCTGAAAGTGACGTCGATATTGAGAAGAACGATGGAGGAGACGATGATTATGATGCATTTTCTAATGAATTACAACCCCAGGGTGTTGATCCCAGTCGAGGTTGGGGATATCGAGGCGTACATAAGGCAATAATTTGTGGAAGGGTTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGGACGATAACAATCTTTACTGTTGGAACAGGAGGGATGTATGACCAACGAATTGTTGATGGAAGAGGTCTGCCGAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACTACTTGGTGCTTATGCAGTTCAAAAACTTTGTAAAAACGCGTCGGTTTATGTTGAGGGTGACATTGAGACCAGAGTCTACAATGACAGCATCAATGGCGAAGTGAAAAATATTCCAGAAATATGTGTTCGACGTGATGGGATGCTTCGCCTTTTAAAACCTGGAGAAAGTGCCAGCAATTTGTCTTTAGACGATTTGAAAGAAAGGTTGTTTTCGAACGAGACATAA

Protein sequence

MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAFSNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLRLLKPGESASNLSLDDLKERLFSNET

Homology

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BLAST of Pay0005527 vs. ExPASy Swiss-Prot
Match: Q84J78 (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.8e-67
Identity = 129/209 (61.72%), Postives = 155/209 (74.16%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNS+  R+    R  S     S    S +  SK W STG  +  V+ +  +   +     
Sbjct: 1   MNSLAIRVSKVLRSSS----ISPLAISAERGSKSWFSTGPIDEGVEEDFEENVTE----- 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
             ELQP GVDP +GWG+RGVH+AIICG+VGQAP+QKILRNGRT+TIFTVGTGGM+DQR+V
Sbjct: 61  RPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
                PKPAQWHRIAVHNE+LG+YAVQKL KN+SVYVEGDIETRVYNDSI+ EVK+IPEI
Sbjct: 121 GATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 180

Query: 181 CVRRDGMLRLLKPGESASNLSLDDLKERL 210
           CVRRDG +R++K GES S +S D+LKE L
Sbjct: 181 CVRRDGKIRMIKYGESISKISFDELKEGL 200

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BLAST of Pay0005527 vs. ExPASy Swiss-Prot
Match: P18022 (Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 GN=ssb PE=3 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 78  RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMY-DQRIVDGRGLPKPAQWHRIAV 137
           RG++K I+ GR+G  P  + + NG  +    V T   + D++  + R   +  +WHR+ +
Sbjct: 4   RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMR---EQTEWHRVVL 63

Query: 138 HNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLRLL 192
             + L   A + L K A VY+EG + TR ++D  NG  + I EI V+  G +++L
Sbjct: 64  FGK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112

[Close]

BLAST of Pay0005527 vs. ExPASy Swiss-Prot
Match: P28045 (Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 GN=ssb PE=3 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09
Identity = 37/115 (32.17%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 78  RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMY-DQRIVDGRGLPKPAQWHRIAV 137
           RG++K I+ GR+G  P  + + NG  +    V T   + D++  + R   +  +WHR+ +
Sbjct: 4   RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMR---EQTEWHRVVL 63

Query: 138 HNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLRLL 192
             + L   A + L K A VY+EG + TR ++D  NG  + I EI V+  G +++L
Sbjct: 64  FGK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112

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BLAST of Pay0005527 vs. ExPASy Swiss-Prot
Match: Q9ZAQ8 (Single-stranded DNA-binding protein OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=ssb PE=3 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 7.2e-09
Identity = 37/120 (30.83%), Postives = 61/120 (50.83%), Query Frame = 0


Query: 80  VHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIVDGRGLPKPAQWHRIAVHNE 139
           V+K II G +G+ P  +  +NG  +    + T   +  R    R   +  +WH +A+ +E
Sbjct: 5   VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGER--KERTEWHSVAIFDE 64

Query: 140 LLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVR--RDGMLRLLKPGESA 198
            L   A Q L K ++VY+EG +ETR + D  +G+ +   E+ +R  R  +  L   GE A
Sbjct: 65  NLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLRPFRSSLTMLGGRGEGA 121

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BLAST of Pay0005527 vs. ExPASy Swiss-Prot
Match: Q92G30 (Single-stranded DNA-binding protein OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=ssb PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 31/124 (25.00%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 80  VHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIVDGRGLPKPAQWHRIAVHNE 139
           ++K I+ G VG+ P  +    G+ I   ++ T   +  RI   R   +  +WHR+ + +E
Sbjct: 5   LNKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 64

Query: 140 LLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLRLLKPGESASN 199
            L +   + + K + +Y+EG ++TR +ND+ +G+ K   E+ ++      +L   ++++N
Sbjct: 65  GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILLDSKNSNN 124

Query: 200 LSLD 204
            + D
Sbjct: 125 HNQD 125

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BLAST of Pay0005527 vs. ExPASy TrEMBL
Match: A0A1S3BQI7 (single-stranded DNA-binding protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492127 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.4e-116
Identity = 211/214 (98.60%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSVT RLLNRFRIPSSN PTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF
Sbjct: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV
Sbjct: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLRLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDGML LLKPGESASNLSLDDLKERLFSNET
Sbjct: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 214

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BLAST of Pay0005527 vs. ExPASy TrEMBL
Match: A0A0A0LVY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568540 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 195/214 (91.12%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSV  R LNRFR PSSNFPTSSFVAS QTSSKFWLSTGASE D D+EKNDG +DDYD F
Sbjct: 1   MNSVAMRFLNRFRTPSSNFPTSSFVASAQTSSKFWLSTGASEGDNDVEKNDGEEDDYDTF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDP+RGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 
Sbjct: 61  SNELQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIF 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGR LPKPAQWHRIAVHNELLGAYAVQKLC+NASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRDLPKPAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLRLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDG LRLLKPGESASN+SLDDLKE LFSN+T
Sbjct: 181 CVRRDGTLRLLKPGESASNISLDDLKEGLFSNKT 214

[Close]

BLAST of Pay0005527 vs. ExPASy TrEMBL
Match: A0A5D3CEJ3 (Single-stranded DNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004340 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.4e-100
Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSVT RLLNRFRIPSSN PTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF
Sbjct: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV
Sbjct: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLRL 191
           CVRRD  + +
Sbjct: 181 CVRRDASVAI 190

[Close]

BLAST of Pay0005527 vs. ExPASy TrEMBL
Match: A0A6J1C1K4 (single-stranded DNA-binding protein, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007549 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.1e-90
Identity = 169/213 (79.34%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSV  R    FRIPSS FP SSFVAS QTSSK W STG SESD D+EKN+  +++YD  
Sbjct: 1   MNSVALRFAKHFRIPSSTFPASSFVASRQTSSKLWFSTGVSESDNDVEKNNREEEEYDDM 60

Query: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
            +   ELQPQGVDP RGWG+RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  FDDKVELQPQGVDPRRGWGFRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV+ + LPKPAQWHRIAVHNE LGAYAVQ+L K+ASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKDASVYVEGDIETRVYNDSINGEVKNV 180

Query: 181 PEICVRRDGMLRLLKPGESASNLSLDDLKERLF 211
           PEICVRRDG +RLLKP ESASN+SLDDLKE LF
Sbjct: 181 PEICVRRDGKIRLLKPAESASNISLDDLKEGLF 213

[Close]

BLAST of Pay0005527 vs. ExPASy TrEMBL
Match: A0A6J1HZ42 (single-stranded DNA-binding protein, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467920 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 170/217 (78.34%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MN+V  R L  FRI      +SSFVAS QTSSK WLSTGAS S +D+EKN+G +++YD F
Sbjct: 1   MNAVAMRFLKHFRI------SSSFVASRQTSSKLWLSTGASGSGIDVEKNNGEEEEYDDF 60

Query: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
            N   ELQPQGVDP RGWG+RGVHKAIICGR+GQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  FNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV+ + LPKPAQWHRIAVHNE LGAYAVQ+L KNASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNV 180

Query: 181 PEICVRRDGMLRLLKPGESASNLSLDDLKERLFSNET 215
           PEICVRRDG +RLLK GESASN+SLDDLKE LF NET
Sbjct: 181 PEICVRRDGKIRLLKAGESASNISLDDLKEGLFQNET 211

[Close]

BLAST of Pay0005527 vs. NCBI nr
Match: XP_008450570.1 (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 1.1e-115
Identity = 211/214 (98.60%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSVT RLLNRFRIPSSN PTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF
Sbjct: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV
Sbjct: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLRLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDGML LLKPGESASNLSLDDLKERLFSNET
Sbjct: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 214

[Close]

BLAST of Pay0005527 vs. NCBI nr
Match: XP_004135584.1 (single-stranded DNA-binding protein, mitochondrial [Cucumis sativus] >KGN66025.1 hypothetical protein Csa_007128 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 2.5e-107
Identity = 195/214 (91.12%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSV  R LNRFR PSSNFPTSSFVAS QTSSKFWLSTGASE D D+EKNDG +DDYD F
Sbjct: 1   MNSVAMRFLNRFRTPSSNFPTSSFVASAQTSSKFWLSTGASEGDNDVEKNDGEEDDYDTF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDP+RGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 
Sbjct: 61  SNELQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIF 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGR LPKPAQWHRIAVHNELLGAYAVQKLC+NASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRDLPKPAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLRLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDG LRLLKPGESASN+SLDDLKE LFSN+T
Sbjct: 181 CVRRDGTLRLLKPGESASNISLDDLKEGLFSNKT 214

[Close]

BLAST of Pay0005527 vs. NCBI nr
Match: KAA0050936.1 (single-stranded DNA-binding protein [Cucumis melo var. makuwa] >TYK10283.1 single-stranded DNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 374.8 bits (961), Expect = 5.0e-100
Identity = 183/190 (96.32%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSVT RLLNRFRIPSSN PTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF
Sbjct: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV
Sbjct: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLRL 191
           CVRRD  + +
Sbjct: 181 CVRRDASVAI 190

[Close]

BLAST of Pay0005527 vs. NCBI nr
Match: XP_038878660.1 (single-stranded DNA-binding protein, mitochondrial [Benincasa hispida])

HSP 1 Score: 364.4 bits (934), Expect = 6.8e-97
Identity = 182/217 (83.87%), Postives = 194/217 (89.40%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MN+V  R LNRFRI SSNFPT+SFVAS QTS K WLST ASESDVD+EKN+G +D+YD F
Sbjct: 1   MNAVAMRFLNRFRISSSNFPTTSFVASRQTSWKLWLSTDASESDVDVEKNNGEEDEYDQF 60

Query: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
            N   ELQPQGVDP RGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  FNEKVELQPQGVDPRRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV+ + LP+PAQWHRIAVHNE LGAYAVQ+L KNASVYVEGDIETRVYNDSI GEVKNI
Sbjct: 121 RIVEAKDLPRPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSIGGEVKNI 180

Query: 181 PEICVRRDGMLRLLKPGESASNLSLDDLKERLFSNET 215
           PEICVRRDG LRLLKPGESASN+SLDDLKE LF NET
Sbjct: 181 PEICVRRDGKLRLLKPGESASNISLDDLKEGLFQNET 217

[Close]

BLAST of Pay0005527 vs. NCBI nr
Match: XP_022135640.1 (single-stranded DNA-binding protein, mitochondrial [Momordica charantia])

HSP 1 Score: 340.5 bits (872), Expect = 1.0e-89
Identity = 169/213 (79.34%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSV  R    FRIPSS FP SSFVAS QTSSK W STG SESD D+EKN+  +++YD  
Sbjct: 1   MNSVALRFAKHFRIPSSTFPASSFVASRQTSSKLWFSTGVSESDNDVEKNNREEEEYDDM 60

Query: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
            +   ELQPQGVDP RGWG+RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  FDDKVELQPQGVDPRRGWGFRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV+ + LPKPAQWHRIAVHNE LGAYAVQ+L K+ASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKDASVYVEGDIETRVYNDSINGEVKNV 180

Query: 181 PEICVRRDGMLRLLKPGESASNLSLDDLKERLF 211
           PEICVRRDG +RLLKP ESASN+SLDDLKE LF
Sbjct: 181 PEICVRRDGKIRLLKPAESASNISLDDLKEGLF 213

[Close]

BLAST of Pay0005527 vs. TAIR 10
Match: AT4G11060.1 (mitochondrially targeted single-stranded DNA binding protein )

HSP 1 Score: 255.4 bits (651), Expect = 4.1e-68
Identity = 129/209 (61.72%), Postives = 155/209 (74.16%), Query Frame = 0


Query: 1   MNSVTARLLNRFRIPSSNFPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNS+  R+    R  S     S    S +  SK W STG  +  V+ +  +   +     
Sbjct: 1   MNSLAIRVSKVLRSSS----ISPLAISAERGSKSWFSTGPIDEGVEEDFEENVTE----- 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
             ELQP GVDP +GWG+RGVH+AIICG+VGQAP+QKILRNGRT+TIFTVGTGGM+DQR+V
Sbjct: 61  RPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
                PKPAQWHRIAVHNE+LG+YAVQKL KN+SVYVEGDIETRVYNDSI+ EVK+IPEI
Sbjct: 121 GATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 180

Query: 181 CVRRDGMLRLLKPGESASNLSLDDLKERL 210
           CVRRDG +R++K GES S +S D+LKE L
Sbjct: 181 CVRRDGKIRMIKYGESISKISFDELKEGL 200

[Close]

BLAST of Pay0005527 vs. TAIR 10
Match: AT3G18580.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 54/159 (33.96%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 54  DDDYDAFSNELQPQGVDP-SRGWGYR--------------GVHKAIICGRVGQAPVQKIL 113
           D D+D   + ++P+  DP SR  G                G+ KAI+ G+VGQ P+QK L
Sbjct: 39  DSDFDELESPIEPKASDPVSRFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKL 98

Query: 114 RNGRTITIFTVGTGGMYDQRIVDGRGLPK------PAQWHRIAVHNELLGAYAVQKLCKN 173
           ++GRT+T+F+VGTGG+ + R       P+        QWHR++V+ E L    ++ +   
Sbjct: 99  KSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPG 158

Query: 174 ASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLRLL 192
             +Y+EG++ET+++ D + G V+ I E+ +RR+G +  L
Sbjct: 159 TVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFL 197

The following BLAST results are available for this feature:

BLAST of Pay0005527 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84J78	5.8e-67	61.72	Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P18022	2.5e-09	32.17	Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 G...	[more]
P28045	2.5e-09	32.17	Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 G...	[more]
Q9ZAQ8	7.2e-09	30.83	Single-stranded DNA-binding protein OS=Rhodobacter sphaeroides (strain ATCC 1702...	[more]
Q92G30	1.6e-08	25.00	Single-stranded DNA-binding protein OS=Rickettsia conorii (strain ATCC VR-613 / ...	[more]

BLAST of Pay0005527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQI7	5.4e-116	98.60	single-stranded DNA-binding protein, mitochondrial OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LVY2	1.2e-107	91.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568540 PE=4 SV=1	[more]
A0A5D3CEJ3	2.4e-100	96.32	Single-stranded DNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1C1K4	5.1e-90	79.34	single-stranded DNA-binding protein, mitochondrial OS=Momordica charantia OX=367...	[more]
A0A6J1HZ42	1.9e-89	78.34	single-stranded DNA-binding protein, mitochondrial OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Pay0005527 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450570.1	1.1e-115	98.60	PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis melo]	[more]
XP_004135584.1	2.5e-107	91.12	single-stranded DNA-binding protein, mitochondrial [Cucumis sativus] >KGN66025.1...	[more]
KAA0050936.1	5.0e-100	96.32	single-stranded DNA-binding protein [Cucumis melo var. makuwa] >TYK10283.1 singl...	[more]
XP_038878660.1	6.8e-97	83.87	single-stranded DNA-binding protein, mitochondrial [Benincasa hispida]	[more]
XP_022135640.1	1.0e-89	79.34	single-stranded DNA-binding protein, mitochondrial [Momordica charantia]	[more]

BLAST of Pay0005527 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11060.1	4.1e-68	61.72	mitochondrially targeted single-stranded DNA binding protein	[more]
AT3G18580.1	1.0e-21	33.96	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 80..184 e-value: 1.5E-21 score: 76.4
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 80..189 score: 11.806219
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 84..188 e-value: 8.08553E-18 score: 73.4153
None	No IPR available	GENE3D	2.40.50.140		coord: 79..192 e-value: 2.4E-19 score: 71.3
None	No IPR available	PANTHER	PTHR10302:SF13	SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL	coord: 1..209
IPR011344	Single-stranded DNA-binding protein	TIGRFAM	TIGR00621	TIGR00621	coord: 78..191 e-value: 5.6E-15 score: 54.0
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 1..209
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 78..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005527.1	Pay0005527.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003743	translation initiation factor activity