Pay0005487 (gene) Melon (Payzawat) v1

Overview
NamePay0005487
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionimportin beta-like SAD2
Locationchr11: 7321340 .. 7325914 (-)
RNA-Seq ExpressionPay0005487
SyntenyPay0005487
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGCACTAGGGTTGCTCCTCCGCCGTCAGGGTCAACGCTGTTAGTGCTGGTATATCGTCGTCGTCATTAGTGGTCGTTCTGTCTGCAGCTGCCGTTGCCACTACCTCCCTCTTCGTCTTTGTCACGACCTCTTAGTTGGAGGTAATTCAAAGTTGAAAATTTTAAATACAAACCCCCTTTGAATTTATTCTTAATTTCATTTTCTATCACTGGGTTTCTTTTTTTCATTCTAACTCTTCCAATATTTCTTCTTGATTTCTGTTTTCGTTATATTCAAGAGTTTGGAATGGGGTTGTAATTGCTTTTCATGTTCTTGGCAAAAATGGTGAGTTTAGAAGGGAAAGTATGGTTTTATTATTATTTTTTATTTACTTACTGCTAATGTGTCGAATTGTTTGATTTTTGTCTGAATCCTTGTATGTTTATGCTCGTTTGTACACAGAAGCTGCAAAAAAGGAGGAAGTTGAAGAAGATGATGAAATGGATGGTTACCCAAGCAATGAAGATGATGACGATGGAGATGGTTCTGATAAGGAAATGGATGGTTACTCAATGATTTGTACTACCTTCCATTTAATAATGGAAGAATTTTTTTTTTAAAATAGAGTATTTCCCGACGCACAAAACAAAGCGTCGGGAGACCCTAGACATATTCCAATGTTGTATAGAACGTCGAGATATGTCTAGCTACAACGTCGGGATATGTCTAGGATCTCCCGACGCTTCGTTTTGTGGTCGAAAAATTTTCTCCCGACTTTCGTCCCGATGCACATTTATGCGTTGGGAGATCCTTTCCCGAGGATTTTGCGTATATCTTCCGACGCTTTTGGGTGTCAGGAGTTCTCCCTTTTCTTGTAGTGGTAAACTTGAAATATTTATAAAATAGCTAACTTTATGGACTTTGTTATACGGGTCGTAAATATTTTAGTGATTTGTTATATTTATGAAAATTTCCCTAAAAAATGGTTTGCAAAAATTAGAGTTGAGTTTAAGAGTTATTTGGGCATGAGAAAGGTGTTAGCATCAAGCAAACCGTAACAAAGCTCCCTAATTATAGTGCAGTGACACTCTGATTCAACACTGCGCACACATTACGTAGCACGCTGGCGCTCCAACTATTTTATAATTTAAAATTTTACAATTTTAGGTTCACATGATTCAATTCCCATATGAATTTTCTCTATAATTATATATACTGTTGTAGTAATTGTATGGTTATTGGCTAGCAATCAAATCACAATGGGTGACATATACTTGTGATTTGACCAAGTGGAAAATGGCTTGGTTAGCTAGCTAGTTTGTTTTAATATTCAACCTAGGGATGAAAAATGATGAATATTAATTTAGGTTGTTTCTAGCTAGTTAACCTTCACCTTATAAGCGTAATCCCAATTCTTAATACTTTTGACTTAACTTGATTAGGATCATTTCATCTAATTGAATTGACCAATTGATCAATTAGGACTCTCTCTTGGCTTTCTCAAGTGATTGACGAAGCTCAGATAAGATAGAATTAAATTAGGATCAATCAATCATCACGTTATAATTCGGAAAATAACTCAAAAGACTAGGACCATTAAATCCTTTGCATTGTATTTCATTTAAGTTTTCTGCAATTTATTTTTTTACAATAATTCAAAAAACAAACCCAATCGATTACCCTTGGGCTCAACTATTTGGCTAAAAATTGACATGCTCGTTGAGTTCGAGCTAGTCTTGCCACTAAAATTAGTTCATTATGGTAGATTTAATAAATTAATTTGGTCTTGAATATGGTAGAATTCAAGAATGATCGAGAGAGATGCTTTAATTTTGCTTGATCTTCATGATGGAAAAACCAAACAAAAGACATGCTGCAGCGAAAGATAAAGATCATGCTTTACTCTATATGCACCTAAACGATTTAGAAGTTAACATGCTACTACCATGCGATGGACCTAAACGAAGAGGGAGGAAGGTAAACGATGAACTTACATTTTATAGTTCTGAACTTCTTATTCGATCCAAAACTTCTTTCTTCTCTTTCCTGAAATCACGAGCCAAGGACAACACCAAGCTACCTACCTATGCTCAAGGAACCAAGAACTGATTGTGGGACTCGCTATGGAAGAGAATTTTTTAGAGATGGAAGTCAATCGTTTAGGTATTTTTTTAGAGCGCAAAAAACATCATCACTTTCTCATTCGGTAATGAGAAGTTTTATATGAAACTTACATGCAAATTGCATGTAAATTATTTCATATATAATCAACACCTAATCAATTCATTAACTCTTTAATGAAATTAGTGACCTTCAATTCATAATCGGCTGCCACATTTCCCATTATTAACGTTTATTAATTATAAGTAATTAGTAAAAGGAGCATTTTGGTCATTTGACCAACTTAAGTCAAAGTCAACTTTGACTTAATTGGTCAAAAGTCAACTTTTTTGACTTTTTACTAATTTTTCCATCTTGACTAATTCTAACCTCCGAGTATGAATCCGCATTCAATTTTCTAAAATTCAAATCATATTTGAATATGAATTCGGTCAAAGTTCAAAAATCAACATGTTGACTTTTTTATCGTTCTCTAAACTTTTCAAGCTTTTAAATATAAATCTATATTCATATTTATTAAATCATAATTTAAAAAAAAATTTAAAAGTTATTCTACCGAGACTTATATCTTATATATTTGTCAGCTTCTCTCTCTTATCTTTATTCGAACAATTCCAATTACTTCAACATACTTGTTCTTAGTTAAATCCATATGAACTAGTAGGGAACCTAATGGACATATAGATCATGGGCTCCAACGATTCAAAATTAACTGGCTAAACTCTTTTAGACCAAAGTTAATCAACATTCGTCAACTATGAGTCATTCCATTAAAGACACTTAGTTGCACTCCCTCACTATAGATATTAATTTCTGTCCCACTGATATAACCATAATGGGTAAGTCGATCTTTCACAGATTGTTTTGTAATTCTTGGCTGGGTCAAAATACTGTTTTACCCCTAGAATTACATCTTGCTCCTTAAGACCCACTGGATCCACTTTTGAACAATTGGTTTAAGGTCCGACCTATAAACCAGAATCTTTTTCGAGCCAATGAGAAGGTGGGGCCCCTTGTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTAATATCCCATAAGTGGGTATGAGTGAATTCCATCTTGCACCCTATGTCCCTAGTCATCCATTCGGTGTACCCCTGAAATGGAGGCTTATTGGGCCAGCGATGTTTAGTTGCCCTCAACTTTAATACAGATTTAAGGATACTACCGAATGAAACAGAAGTTCATAGTTAGCTCAGAATTAAGATCAAGTTACCGTTAGGCCATCATAAAATGAAATAATCAGTTTATAGTTCACGGTGTTATAACTAAAAGTGACTACTTCTTGGTTCCAGTCTTATCTAAACCATTTACATAGAATGTCCCCACTCCCACGTCTCTACATGAATGATTTAGGATTACATTGTTTGTACTAATTACGGAGCGGGCTGCATCCATTGTGTTTATCCAGAATAAAGGCGCCAACCTTATTCATACACTAGACTATTTGGGCTATTTAAAACTTGAAACTAAATTCAAAATGTTTATTTCTCAACATAAAGTTCAAGTATATATGAAACTAGTAATATAGCCTCGAGACTTAAATTTATTGGTTTTAAGATTATAATATTCAATAATTGAATCAAACAAAGTATGAGTTTTAGGACACAAATTCCAACACTTCAAGGGTCTCACATCTATAAATAAGCGTCGAGTTCTCATTTGTAAAGCAAGCAAGCAAAGGGAGGATGAAAGAAAAGCAATAGAGAGTTAAGAGAGAAAAATATGTTAGTATATTAAGAGAGTGAACGAGAACTCGACGCTTATTAGAAGTCTCTAAGTCAACAATGAGAAAGACAGACCTTATTGAAGCAAGGCTGAAGATCAGACACAACTACACAGGGTTTGTTCTAACTCAAATCAACATTACAGACAGTAAAGGTAACATCTTTATGATCCATACTGTTTCTTACACTAAAGGAAAATGGTTCAAAGAAAGAAACATAAACATATATGGATCCTTCACAAGACAAGCTGCCCTGGAATTCAACGAGTATGATTTTGAAGCTGAACAATATTGATTCATGGGGTTTGCTGCCACACCTTCGAAAAAAAAAGAAAAAAAACCAAAGGAAGTGAACAGGAACGGTCGGAATAGTAACAAACGTCCAACCATTTCAAACTCACTAGACTCAACTTCATAATTTCTAACAACTCTGATGGAGGTAGGGGCAATGATGGAAGACTCAAATTCATCATTTCAGAAAAGATGGACAAAGGGAAGGTATAATGGTCTTCAATCATAGTCAAGAAGAGAAGGCTAATTTTCCAAAGAGGAAAGTCAGTTTCCCCTCTCTAAAAAACAAAACCTTCTTCTACAACCCTGAAAATGCCCCAGCTAAACCTCTTTGTATTGAAAGTCCCACTTTCAAAGACAACTCCACAAGTCTTGATAGAACCCCAAAGCCATTGAAGATCAGTCCTCCTAAATGCACCTAG

mRNA sequence

ATGGAGTGCACTAGGGTTGCTCCTCCGCCGTCAGGGTCAACGCTGTTAGTGCTGCTGCCGTTGCCACTACCTCCCTCTTCGTCTTTGTCACGACCTCTTAGTTGGAGAGTTTGGAATGGGGTTGTAATTGCTTTTCATGTTCTTGGCAAAAATGAAGCTGCAAAAAAGGAGGAAGTTGAAGAAGATGATGAAATGGATGGTTACCCAAGCAATGAAGATGATGACGATGGAGATGGTTCTGATAAGGAAATGGATGCTAAACCTCTTTGTATTGAAAGTCCCACTTTCAAAGACAACTCCACAAGTCTTGATAGAACCCCAAAGCCATTGAAGATCAGTCCTCCTAAATGCACCTAG

Coding sequence (CDS)

ATGGAGTGCACTAGGGTTGCTCCTCCGCCGTCAGGGTCAACGCTGTTAGTGCTGCTGCCGTTGCCACTACCTCCCTCTTCGTCTTTGTCACGACCTCTTAGTTGGAGAGTTTGGAATGGGGTTGTAATTGCTTTTCATGTTCTTGGCAAAAATGAAGCTGCAAAAAAGGAGGAAGTTGAAGAAGATGATGAAATGGATGGTTACCCAAGCAATGAAGATGATGACGATGGAGATGGTTCTGATAAGGAAATGGATGCTAAACCTCTTTGTATTGAAAGTCCCACTTTCAAAGACAACTCCACAAGTCTTGATAGAACCCCAAAGCCATTGAAGATCAGTCCTCCTAAATGCACCTAG

Protein sequence

MECTRVAPPPSGSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSNEDDDDGDGSDKEMDAKPLCIESPTFKDNSTSLDRTPKPLKISPPKCT
Homology
[Close]
BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A1S3CS13 (importin beta-like SAD2 OS=Cucumis melo OX=3656 GN=LOC103504047 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDDEMDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDEMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1D9T2 (importin beta-like SAD2 OS=Momordica charantia OX=3673 GN=LOC111018539 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.3e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1JWK7 (importin beta-like SAD2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488531 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.3e-06
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS 
Sbjct: 848 GLTSLIALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSE 907

Query: 72  EDDDDGDGSDKEM 85
           EDD+DGDGSDKEM
Sbjct: 908 EDDEDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1EPW3 (importin beta-like SAD2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436321 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.3e-06
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS 
Sbjct: 848 GLTSLIALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSE 907

Query: 72  EDDDDGDGSDKEM 85
           EDD+DGDGSDKEM
Sbjct: 908 EDDEDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1JUP8 (importin beta-like SAD2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488531 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05
Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+    +  AAK+EEVEEDD+MDGYPS 
Sbjct: 848 GLTSLIALPADQLPGEALGR--VFRATLDLLVAYK--DQVAAAKEEEVEEDDDMDGYPSE 907

Query: 72  EDDDDGDGSDKEM 85
           EDD+DGDGSDKEM
Sbjct: 908 EDDEDGDGSDKEM 916

[Close]
BLAST of Pay0005487 vs. NCBI nr
Match: XP_011649413.1 (importin beta-like SAD2 [Cucumis sativus] >KGN65289.2 hypothetical protein Csa_017776 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-06
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDDEMDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDEMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. NCBI nr
Match: XP_008466699.1 (PREDICTED: importin beta-like SAD2 [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-06
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDDEMDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDEMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. NCBI nr
Match: XP_038884983.1 (importin beta-like SAD2 isoform X1 [Benincasa hispida])

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. NCBI nr
Match: XP_038884984.1 (importin beta-like SAD2 isoform X2 [Benincasa hispida])

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]
BLAST of Pay0005487 vs. NCBI nr
Match: XP_022150344.1 (importin beta-like SAD2 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

The following BLAST results are available for this feature:
BLAST of Pay0005487 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0005487 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CS131.5e-0656.16importin beta-like SAD2 OS=Cucumis melo OX=3656 GN=LOC103504047 PE=4 SV=1[more]
A0A6J1D9T23.3e-0654.79importin beta-like SAD2 OS=Momordica charantia OX=3673 GN=LOC111018539 PE=4 SV=1[more]
A0A6J1JWK77.3e-0653.42importin beta-like SAD2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488531 P... [more]
A0A6J1EPW37.3e-0653.42importin beta-like SAD2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436321... [more]
A0A6J1JUP81.2e-0552.05importin beta-like SAD2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488531 P... [more]
BLAST of Pay0005487 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649413.13.0e-0656.16importin beta-like SAD2 [Cucumis sativus] >KGN65289.2 hypothetical protein Csa_0... [more]
XP_008466699.13.0e-0656.16PREDICTED: importin beta-like SAD2 [Cucumis melo][more]
XP_038884983.16.8e-0654.79importin beta-like SAD2 isoform X1 [Benincasa hispida][more]
XP_038884984.16.8e-0654.79importin beta-like SAD2 isoform X2 [Benincasa hispida][more]
XP_022150344.16.8e-0654.79importin beta-like SAD2 [Momordica charantia][more]
BLAST of Pay0005487 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0005487.1Pay0005487.1mRNA