Pay0005487 (gene) Melon (Payzawat) v1

Overview


Name	Pay0005487
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	importin beta-like SAD2
Location	chr11: 7321340 .. 7325914 (-)
RNA-Seq Expression	Pay0005487
Synteny	Pay0005487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTGCACTAGGGTTGCTCCTCCGCCGTCAGGGTCAACGCTGTTAGTGCTGGTATATCGTCGTCGTCATTAGTGGTCGTTCTGTCTGCAGCTGCCGTTGCCACTACCTCCCTCTTCGTCTTTGTCACGACCTCTTAGTTGGAGGTAATTCAAAGTTGAAAATTTTAAATACAAACCCCCTTTGAATTTATTCTTAATTTCATTTTCTATCACTGGGTTTCTTTTTTTCATTCTAACTCTTCCAATATTTCTTCTTGATTTCTGTTTTCGTTATATTCAAGAGTTTGGAATGGGGTTGTAATTGCTTTTCATGTTCTTGGCAAAAATGGTGAGTTTAGAAGGGAAAGTATGGTTTTATTATTATTTTTTATTTACTTACTGCTAATGTGTCGAATTGTTTGATTTTTGTCTGAATCCTTGTATGTTTATGCTCGTTTGTACACAGAAGCTGCAAAAAAGGAGGAAGTTGAAGAAGATGATGAAATGGATGGTTACCCAAGCAATGAAGATGATGACGATGGAGATGGTTCTGATAAGGAAATGGATGGTTACTCAATGATTTGTACTACCTTCCATTTAATAATGGAAGAATTTTTTTTTTAAAATAGAGTATTTCCCGACGCACAAAACAAAGCGTCGGGAGACCCTAGACATATTCCAATGTTGTATAGAACGTCGAGATATGTCTAGCTACAACGTCGGGATATGTCTAGGATCTCCCGACGCTTCGTTTTGTGGTCGAAAAATTTTCTCCCGACTTTCGTCCCGATGCACATTTATGCGTTGGGAGATCCTTTCCCGAGGATTTTGCGTATATCTTCCGACGCTTTTGGGTGTCAGGAGTTCTCCCTTTTCTTGTAGTGGTAAACTTGAAATATTTATAAAATAGCTAACTTTATGGACTTTGTTATACGGGTCGTAAATATTTTAGTGATTTGTTATATTTATGAAAATTTCCCTAAAAAATGGTTTGCAAAAATTAGAGTTGAGTTTAAGAGTTATTTGGGCATGAGAAAGGTGTTAGCATCAAGCAAACCGTAACAAAGCTCCCTAATTATAGTGCAGTGACACTCTGATTCAACACTGCGCACACATTACGTAGCACGCTGGCGCTCCAACTATTTTATAATTTAAAATTTTACAATTTTAGGTTCACATGATTCAATTCCCATATGAATTTTCTCTATAATTATATATACTGTTGTAGTAATTGTATGGTTATTGGCTAGCAATCAAATCACAATGGGTGACATATACTTGTGATTTGACCAAGTGGAAAATGGCTTGGTTAGCTAGCTAGTTTGTTTTAATATTCAACCTAGGGATGAAAAATGATGAATATTAATTTAGGTTGTTTCTAGCTAGTTAACCTTCACCTTATAAGCGTAATCCCAATTCTTAATACTTTTGACTTAACTTGATTAGGATCATTTCATCTAATTGAATTGACCAATTGATCAATTAGGACTCTCTCTTGGCTTTCTCAAGTGATTGACGAAGCTCAGATAAGATAGAATTAAATTAGGATCAATCAATCATCACGTTATAATTCGGAAAATAACTCAAAAGACTAGGACCATTAAATCCTTTGCATTGTATTTCATTTAAGTTTTCTGCAATTTATTTTTTTACAATAATTCAAAAAACAAACCCAATCGATTACCCTTGGGCTCAACTATTTGGCTAAAAATTGACATGCTCGTTGAGTTCGAGCTAGTCTTGCCACTAAAATTAGTTCATTATGGTAGATTTAATAAATTAATTTGGTCTTGAATATGGTAGAATTCAAGAATGATCGAGAGAGATGCTTTAATTTTGCTTGATCTTCATGATGGAAAAACCAAACAAAAGACATGCTGCAGCGAAAGATAAAGATCATGCTTTACTCTATATGCACCTAAACGATTTAGAAGTTAACATGCTACTACCATGCGATGGACCTAAACGAAGAGGGAGGAAGGTAAACGATGAACTTACATTTTATAGTTCTGAACTTCTTATTCGATCCAAAACTTCTTTCTTCTCTTTCCTGAAATCACGAGCCAAGGACAACACCAAGCTACCTACCTATGCTCAAGGAACCAAGAACTGATTGTGGGACTCGCTATGGAAGAGAATTTTTTAGAGATGGAAGTCAATCGTTTAGGTATTTTTTTAGAGCGCAAAAAACATCATCACTTTCTCATTCGGTAATGAGAAGTTTTATATGAAACTTACATGCAAATTGCATGTAAATTATTTCATATATAATCAACACCTAATCAATTCATTAACTCTTTAATGAAATTAGTGACCTTCAATTCATAATCGGCTGCCACATTTCCCATTATTAACGTTTATTAATTATAAGTAATTAGTAAAAGGAGCATTTTGGTCATTTGACCAACTTAAGTCAAAGTCAACTTTGACTTAATTGGTCAAAAGTCAACTTTTTTGACTTTTTACTAATTTTTCCATCTTGACTAATTCTAACCTCCGAGTATGAATCCGCATTCAATTTTCTAAAATTCAAATCATATTTGAATATGAATTCGGTCAAAGTTCAAAAATCAACATGTTGACTTTTTTATCGTTCTCTAAACTTTTCAAGCTTTTAAATATAAATCTATATTCATATTTATTAAATCATAATTTAAAAAAAAATTTAAAAGTTATTCTACCGAGACTTATATCTTATATATTTGTCAGCTTCTCTCTCTTATCTTTATTCGAACAATTCCAATTACTTCAACATACTTGTTCTTAGTTAAATCCATATGAACTAGTAGGGAACCTAATGGACATATAGATCATGGGCTCCAACGATTCAAAATTAACTGGCTAAACTCTTTTAGACCAAAGTTAATCAACATTCGTCAACTATGAGTCATTCCATTAAAGACACTTAGTTGCACTCCCTCACTATAGATATTAATTTCTGTCCCACTGATATAACCATAATGGGTAAGTCGATCTTTCACAGATTGTTTTGTAATTCTTGGCTGGGTCAAAATACTGTTTTACCCCTAGAATTACATCTTGCTCCTTAAGACCCACTGGATCCACTTTTGAACAATTGGTTTAAGGTCCGACCTATAAACCAGAATCTTTTTCGAGCCAATGAGAAGGTGGGGCCCCTTGTCAAGACTTGGATTCAGTCCTTAAGGGAACAACCTATCTAATATCCCATAAGTGGGTATGAGTGAATTCCATCTTGCACCCTATGTCCCTAGTCATCCATTCGGTGTACCCCTGAAATGGAGGCTTATTGGGCCAGCGATGTTTAGTTGCCCTCAACTTTAATACAGATTTAAGGATACTACCGAATGAAACAGAAGTTCATAGTTAGCTCAGAATTAAGATCAAGTTACCGTTAGGCCATCATAAAATGAAATAATCAGTTTATAGTTCACGGTGTTATAACTAAAAGTGACTACTTCTTGGTTCCAGTCTTATCTAAACCATTTACATAGAATGTCCCCACTCCCACGTCTCTACATGAATGATTTAGGATTACATTGTTTGTACTAATTACGGAGCGGGCTGCATCCATTGTGTTTATCCAGAATAAAGGCGCCAACCTTATTCATACACTAGACTATTTGGGCTATTTAAAACTTGAAACTAAATTCAAAATGTTTATTTCTCAACATAAAGTTCAAGTATATATGAAACTAGTAATATAGCCTCGAGACTTAAATTTATTGGTTTTAAGATTATAATATTCAATAATTGAATCAAACAAAGTATGAGTTTTAGGACACAAATTCCAACACTTCAAGGGTCTCACATCTATAAATAAGCGTCGAGTTCTCATTTGTAAAGCAAGCAAGCAAAGGGAGGATGAAAGAAAAGCAATAGAGAGTTAAGAGAGAAAAATATGTTAGTATATTAAGAGAGTGAACGAGAACTCGACGCTTATTAGAAGTCTCTAAGTCAACAATGAGAAAGACAGACCTTATTGAAGCAAGGCTGAAGATCAGACACAACTACACAGGGTTTGTTCTAACTCAAATCAACATTACAGACAGTAAAGGTAACATCTTTATGATCCATACTGTTTCTTACACTAAAGGAAAATGGTTCAAAGAAAGAAACATAAACATATATGGATCCTTCACAAGACAAGCTGCCCTGGAATTCAACGAGTATGATTTTGAAGCTGAACAATATTGATTCATGGGGTTTGCTGCCACACCTTCGAAAAAAAAAGAAAAAAAACCAAAGGAAGTGAACAGGAACGGTCGGAATAGTAACAAACGTCCAACCATTTCAAACTCACTAGACTCAACTTCATAATTTCTAACAACTCTGATGGAGGTAGGGGCAATGATGGAAGACTCAAATTCATCATTTCAGAAAAGATGGACAAAGGGAAGGTATAATGGTCTTCAATCATAGTCAAGAAGAGAAGGCTAATTTTCCAAAGAGGAAAGTCAGTTTCCCCTCTCTAAAAAACAAAACCTTCTTCTACAACCCTGAAAATGCCCCAGCTAAACCTCTTTGTATTGAAAGTCCCACTTTCAAAGACAACTCCACAAGTCTTGATAGAACCCCAAAGCCATTGAAGATCAGTCCTCCTAAATGCACCTAG

mRNA sequence

ATGGAGTGCACTAGGGTTGCTCCTCCGCCGTCAGGGTCAACGCTGTTAGTGCTGCTGCCGTTGCCACTACCTCCCTCTTCGTCTTTGTCACGACCTCTTAGTTGGAGAGTTTGGAATGGGGTTGTAATTGCTTTTCATGTTCTTGGCAAAAATGAAGCTGCAAAAAAGGAGGAAGTTGAAGAAGATGATGAAATGGATGGTTACCCAAGCAATGAAGATGATGACGATGGAGATGGTTCTGATAAGGAAATGGATGCTAAACCTCTTTGTATTGAAAGTCCCACTTTCAAAGACAACTCCACAAGTCTTGATAGAACCCCAAAGCCATTGAAGATCAGTCCTCCTAAATGCACCTAG

Coding sequence (CDS)

ATGGAGTGCACTAGGGTTGCTCCTCCGCCGTCAGGGTCAACGCTGTTAGTGCTGCTGCCGTTGCCACTACCTCCCTCTTCGTCTTTGTCACGACCTCTTAGTTGGAGAGTTTGGAATGGGGTTGTAATTGCTTTTCATGTTCTTGGCAAAAATGAAGCTGCAAAAAAGGAGGAAGTTGAAGAAGATGATGAAATGGATGGTTACCCAAGCAATGAAGATGATGACGATGGAGATGGTTCTGATAAGGAAATGGATGCTAAACCTCTTTGTATTGAAAGTCCCACTTTCAAAGACAACTCCACAAGTCTTGATAGAACCCCAAAGCCATTGAAGATCAGTCCTCCTAAATGCACCTAG

Protein sequence

MECTRVAPPPSGSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSNEDDDDGDGSDKEMDAKPLCIESPTFKDNSTSLDRTPKPLKISPPKCT

Homology

[Close]

BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A1S3CS13 (importin beta-like SAD2 OS=Cucumis melo OX=3656 GN=LOC103504047 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDDEMDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDEMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1D9T2 (importin beta-like SAD2 OS=Momordica charantia OX=3673 GN=LOC111018539 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.3e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1JWK7 (importin beta-like SAD2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488531 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.3e-06
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS 
Sbjct: 848 GLTSLIALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSE 907

Query: 72  EDDDDGDGSDKEM 85
           EDD+DGDGSDKEM
Sbjct: 908 EDDEDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1EPW3 (importin beta-like SAD2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436321 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.3e-06
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS 
Sbjct: 848 GLTSLIALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSE 907

Query: 72  EDDDDGDGSDKEM 85
           EDD+DGDGSDKEM
Sbjct: 908 EDDEDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. ExPASy TrEMBL
Match: A0A6J1JUP8 (importin beta-like SAD2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488531 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05
Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+    +  AAK+EEVEEDD+MDGYPS 
Sbjct: 848 GLTSLIALPADQLPGEALGR--VFRATLDLLVAYK--DQVAAAKEEEVEEDDDMDGYPSE 907

Query: 72  EDDDDGDGSDKEM 85
           EDD+DGDGSDKEM
Sbjct: 908 EDDEDGDGSDKEM 916

[Close]

BLAST of Pay0005487 vs. NCBI nr
Match: XP_011649413.1 (importin beta-like SAD2 [Cucumis sativus] >KGN65289.2 hypothetical protein Csa_017776 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-06
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDDEMDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDEMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. NCBI nr
Match: XP_008466699.1 (PREDICTED: importin beta-like SAD2 [Cucumis melo])

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-06
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDDEMDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDEMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. NCBI nr
Match: XP_038884983.1 (importin beta-like SAD2 isoform X1 [Benincasa hispida])

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. NCBI nr
Match: XP_038884984.1 (importin beta-like SAD2 isoform X2 [Benincasa hispida])

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

[Close]

BLAST of Pay0005487 vs. NCBI nr
Match: XP_022150344.1 (importin beta-like SAD2 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-06
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 12  GSTLLVLLPLPLPPSSSLSRPLSWRVWNGVVIAFHVLGKNEAAKKEEVEEDDEMDGYPSN 71
           G T L+ LP    P  +L R   +R    +++A+      EAAK+EEVEEDD+MDGYPS+
Sbjct: 848 GLTSLLALPADQLPGEALGR--VFRATLDLLVAYKD-QVAEAAKEEEVEEDDDMDGYPSD 907

Query: 72  EDDDDGDGSDKEM 85
           EDDDDGDGSDKEM
Sbjct: 908 EDDDDGDGSDKEM 917

The following BLAST results are available for this feature:

BLAST of Pay0005487 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0005487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CS13	1.5e-06	56.16	importin beta-like SAD2 OS=Cucumis melo OX=3656 GN=LOC103504047 PE=4 SV=1	[more]
A0A6J1D9T2	3.3e-06	54.79	importin beta-like SAD2 OS=Momordica charantia OX=3673 GN=LOC111018539 PE=4 SV=1	[more]
A0A6J1JWK7	7.3e-06	53.42	importin beta-like SAD2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488531 P...	[more]
A0A6J1EPW3	7.3e-06	53.42	importin beta-like SAD2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436321...	[more]
A0A6J1JUP8	1.2e-05	52.05	importin beta-like SAD2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488531 P...	[more]

BLAST of Pay0005487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649413.1	3.0e-06	56.16	importin beta-like SAD2 [Cucumis sativus] >KGN65289.2 hypothetical protein Csa_0...	[more]
XP_008466699.1	3.0e-06	56.16	PREDICTED: importin beta-like SAD2 [Cucumis melo]	[more]
XP_038884983.1	6.8e-06	54.79	importin beta-like SAD2 isoform X1 [Benincasa hispida]	[more]
XP_038884984.1	6.8e-06	54.79	importin beta-like SAD2 isoform X2 [Benincasa hispida]	[more]
XP_022150344.1	6.8e-06	54.79	importin beta-like SAD2 [Momordica charantia]	[more]

BLAST of Pay0005487 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0005487.1	Pay0005487.1	mRNA