Pay0005457 (gene) Melon (Payzawat) v1

Overview
NamePay0005457
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionUnknown protein
Locationchr08: 9917259 .. 9920109 (-)
RNA-Seq ExpressionPay0005457
SyntenyPay0005457
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCCCCACAAAAAGAAATCAAATCCCTCAAATTTCAATGCCATGAAGGCAATCTCAGAAACTCAAAGGTATTCTTTCTTTTTTCTCTTCTTCATTCCATTTTCTATCTTCTTTTTCTTTGAACCCAAAACCCATTTCAAATTTTGCTTCCATTTTATGTTTCTTCAACTCTTTTGTTCAGATTTAGTATTGGGTTTTTATTTCTTTGATTTTCTGCTTTTTTTTTTTTCATATACCCCTTTACTTAGAAATCAAAACCCATTTGATATTTTGCTTCCATTTTATGGTTTCTTCAAAACCCGTTAAATAATTTTCTACTTCTTGTTGCAGTTTTTTAGGGTTTTTTTTTTTTGTTTGGTATTTCTCAGGTCTTCAGTGAATCAAGAATTGTGGAATACGATTTCAAAGAAAGACTTATTTCCCCTAAAAAACACGAGGTGCATGACCAAGCACAGTCACTATTATTGTTTTCTTTCTAGTTTCTATTATCAATTTATTAATGTTTACAGTTGATGAGAGTTTCAATTTTGAACACAAATTATTGTCAATAAGAAGCAACACTAAAGTTTTTGGGAAGAAACATAGATTTGGAATCCATGATCGTCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCATCATGAGGACTGGTACGTTAGCCAACATTTTTCACCTTTACATTTCTTTGAATAGACTTGTTGCCTTCATCCGCCTCTTAATCATTCTCTTGCTTGCAACGAGTAAGGTTATCTAGTGTATAGGGTTTAGAAGAGTTAGAATTGAATGGGGATCCTAACTCTCCAGACTGGGGTTGTTTGGCAGGCAATTGAGAAATTAATAAAAGAGTTGGCAATCAATATAGAGAGGAAGAGCTTGAGTATTAATAATGTCTAATAAAATGCGTGTTTTTTCAGCTGTATTGATTTTCAAGCACAAGGTTGGGTTGTCATTTGTAAATGTAAATGTTTTGTGGAAGTGTTTTAGATGAAAGCATTTTTAGTCCATTGCATAAGTAATGTACTCTAGATAAATATACATATATTATGTCTGAAGTATTAGGCTATAAGCCAGATATTACAAAGATGGAGTCTAGACAAAAACAATTTGAGAATGGATATTTTCTGCTATCCAATGCTATGGAAAAAAATTCATATCTTTTTCTTTCTTATTCATGTTCCAGCTGACTTGTTTTATTAATTTTTTTATGCACTTGGTTGTTCATACTTGTTTTATTATTTTTATTTGTTATATTCCTTGATGTATTCGTTATATTCCTTCCTCTAATGATTGACGGTATTTCTTCTATATAAGAAGATTGTGAAGAAGCACGCTCACCATTTGTGTAGAAGTACAAGACTGTCATACACCCTGGTGAGGTATATGTCTTTCAATTTCTCAAACAATGAAGTATAAAACATATGAAAACATTAGATATAGTGAAGCTCATCTTCATATAAGAAATCTATTCCTGTCAACATTATGCAATTTCTCAAGCTTTTTAATATATTTAGTTGTTGATTCTTGATATTAATAGGATTCTTAATATTAATACAACTTTGCTGATTTTCTTAAGTTATTAGCTTACTGGTTTTTTCAAATTTGTAGCTTAGTTTTAGCTTGAATTAGGCTTCACATTTATGAAAAGATATGATCACTTGTTTGAAGATAATTTCTTTTGCTTTGAGTATTTTTGTATTTTGGTGCAACACAATCATCCTAAATTCTTTTGTAATTATATAATCATCATATGCTTATTTACACAGTTGAAAGACTTTCATATAACTGTTTTGGTGGGGAGGGGTAACCTCTACCCTTGCCCTTTGGGTCGTTCTTCTTTCTCTCATTTTTTCTCTTAGTCAAATTATAAGAATGACTAAAAGAGTTAAGGTTACTAGTTCATTTGTAAGCCTAGGCACACCGCTACCAACACAGCTTCCACATATAGCTCAACAAAGTACAACTTGGAAACATGGTCCAGTTTGAAACAATATTACCTTTATTCATGTGTATCAAGAATCATATTGACTTTTCTGTAGAGTTTTATGTTAAAATATGCTATGGTGCATATTCATTCCATAATTCAAATCCGATAATAAGAAGGAAGCATAGAAGGGAAGCATGGAAGATATATTTTGTTTTTGATCCAATGGAAATTAATGTAGAATGGCTTGATAAAAAAATTTGGGGCACGAAAATGTTGACATTTTGTAGGATTTTGTTAAATTGAATGTTGATTTTGCATATTGGGTTAGTAAAATATTATTCTCAATGGTGTTAATCCTTTTGGATTTTGGAGGTTAGTATCCTCCCGTGCATTTGGATTTACTATTTTTAGTCCATGGTGCTAATGTAATAACCTTACTTGTAGGTTTAGTATCCTTTTTCTGAAAGATTTTGCACGATCGAACTAGCTTTACTATAAGTTTATGATACATTTCAAAATTTTGATTGTTTCTATGTTATTATGGTCTGTTTGTTTTTATCTTTTCTTACCAATTTTGTTATTTGTTTGGGCTAAAATTTTGATATAGATTTCCTCCCTAAGAGTCCATAATTGGTGCTTGGTTTCTTCACGTTATTGGTTCATTTGATTTTTAGGACAAAAAACTTGAAACGGAAGACCCTGAGAAGAAGAAGAATGAAGAAAAGGTTTCTTTCTCCCATTTCTTATTTATTTTTTATCGTATTGCTACGCATTTTTTTGGCAGTTTGGTATAGTGTTGTTGCTATTATTTTGTTTTATTTCAATTGAAGCTTAATTGGACTGGCTCGGGGCCTGGTTCGGCCTCGGATGATTCGGTTGAGTTGGCTGATATGGATTCTTCTGTGTTGGATGAGCTTTTGGTGA

mRNA sequence

ATGAGTGCCCCACAAAAAGAAATCAAATCCCTCAAATTTCAATGCCATGAAGGCAATCTCAGAAACTCAAAGGTCTTCAGTGAATCAAGAATTGTGGAATACGATTTCAAAGAAAGACTTATTTCCCCTAAAAAACACGAGATTGTGAAGAAGCACGCTCACCATTTGTGTAGAAGTACAAGACTGTCATACACCCTGGTGAGGACAAAAAACTTGAAACGGAAGACCCTGAGAAGAAGAAGAATGAAGAAAAGCTTAATTGGACTGGCTCGGGGCCTGGTTCGGCCTCGGATGATTCGGTTGAGTTGGCTGATATGGATTCTTCTGTGTTGGATGAGCTTTTGGTGA

Coding sequence (CDS)

ATGAGTGCCCCACAAAAAGAAATCAAATCCCTCAAATTTCAATGCCATGAAGGCAATCTCAGAAACTCAAAGGTCTTCAGTGAATCAAGAATTGTGGAATACGATTTCAAAGAAAGACTTATTTCCCCTAAAAAACACGAGATTGTGAAGAAGCACGCTCACCATTTGTGTAGAAGTACAAGACTGTCATACACCCTGGTGAGGACAAAAAACTTGAAACGGAAGACCCTGAGAAGAAGAAGAATGAAGAAAAGCTTAATTGGACTGGCTCGGGGCCTGGTTCGGCCTCGGATGATTCGGTTGAGTTGGCTGATATGGATTCTTCTGTGTTGGATGAGCTTTTGGTGA

Protein sequence

MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRSTRLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW
Homology
[Close]
BLAST of Pay0005457 vs. ExPASy TrEMBL
Match: A0A1S3C297 (uncharacterized protein LOC103495835 OS=Cucumis melo OX=3656 GN=LOC103495835 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60
           MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST
Sbjct: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60

Query: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 116
           RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW
Sbjct: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 115

[Close]
BLAST of Pay0005457 vs. ExPASy TrEMBL
Match: A0A1S4DVU2 (uncharacterized protein LOC107990753 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990753 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEY 35
           MSAPQKEIKSLK QCHE NLRNSKVFSESRIVEY
Sbjct: 78  MSAPQKEIKSLKSQCHESNLRNSKVFSESRIVEY 111

[Close]
BLAST of Pay0005457 vs. NCBI nr
Match: XP_008455732.1 (PREDICTED: uncharacterized protein LOC103495835 [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60
           MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST
Sbjct: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEYDFKERLISPKKHEIVKKHAHHLCRST 60

Query: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 116
           RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW
Sbjct: 61  RLSYTLVRTKNLKRKTLRRRRMKKSLIGLARGLVRPRMIRLSWLIWILLCWMSFW 115

[Close]
BLAST of Pay0005457 vs. NCBI nr
Match: XP_016900106.1 (PREDICTED: uncharacterized protein LOC107990753 isoform X1 [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   MSAPQKEIKSLKFQCHEGNLRNSKVFSESRIVEY 35
           MSAPQKEIKSLK QCHE NLRNSKVFSESRIVEY
Sbjct: 78  MSAPQKEIKSLKSQCHESNLRNSKVFSESRIVEY 111

The following BLAST results are available for this feature:
BLAST of Pay0005457 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0005457 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C2971.3e-55100.00uncharacterized protein LOC103495835 OS=Cucumis melo OX=3656 GN=LOC103495835 PE=... [more]
A0A1S4DVU21.3e-0794.12uncharacterized protein LOC107990753 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Pay0005457 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455732.12.6e-55100.00PREDICTED: uncharacterized protein LOC103495835 [Cucumis melo][more]
XP_016900106.12.7e-0794.12PREDICTED: uncharacterized protein LOC107990753 isoform X1 [Cucumis melo][more]
BLAST of Pay0005457 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0005457.1Pay0005457.1mRNA