Pay0005359 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAACCTTCTTCTCTTTCACTTTCTCTCTTTCTCCTTTCTCATGGCTATGCCTTGTTTCTTTCTCACTCTTTTATTCTTCTTATCTACGTTGCATGCGTGTGACGCTAGTCGTCTTCGATTCTTCCAGAGCTCGAATTTTGTTTCCAGGATTGAACCGCATTCGATCTCTCAAGGGATTTGGACAGATCATGATCAGGAGAGAAGTTTTTACAAAAACAACAGTGACAAGGTTCTTCCTCATAAGGAGATTATTGTTGGGATTGAAATGTTAAAGGTATACTACATATATATATATATATATATATATATATATATATATATATACTTCATCTCCCATCTTGTGCTTTCTAAAGATGAGCTTGTAATTTAGTTCATAATTACTAGCTAGCTATATGAGAGGGGGAGGGGGAGTTTTCAGATATGTAGACATTTTCATTAACATGTCTACATCTTGATAAAACTCAATATCAAAATATATATGAAGTGATAAAAATATACTTTCCCTCTAAATAATGCAATAAACATGTCAACCAAAGTATATATATATATATGCATACATTATCTTATTTAAAAATTCAATCAAATGGTTTTTGGTCGAAATATAATGTTTATCGATATCAAATATATTTGTTTTCAAAGAAACCAACATATAATATCTTTTTATCATTATTTCTATTTACATTTGTACAAACTTGGAAATCTCATAATTTTTATCGACATCAACATTTAGTTCTCGAGTCAAGACAATAATTATGGTGGATATAGACACCATTTAATTTCTTTGGTACAAAATAATAATATCATTAATATAGACAAAGGCATATGAATGGTAAATTGCATGAAAAAAGGGAATGGATTATTTGGAAATATAGAGAGTGTGTGATTAATGAATTAACTTTGGTATTTTAATTTCTCAGGGAATGAAGAAGGATGGAAGCAGATTGGTAATGGAACTTCCAATGAAAGAAAAAGTGATGAATTCTAAGGAAAATGAAGTTGGAGAAGACATGGTAGTGATGGATTATGCACAACCCCATAGAAAGCCTCCTATTCACAATGAAAGACCCTAGATATATATATACATATATGTAATGTAATAGTTCTCAAATTTGCCATCAATATCTAAATATGTTTCAAAAATTAAAGTCTTTTTTTTATATATATATTTTGGAATAAAGAAAAAAGAAT CAAAACCTTCTTCTCTTTCACTTTCTCTCTTTCTCCTTTCTCATGGCTATGCCTTGTTTCTTTCTCACTCTTTTATTCTTCTTATCTACGTTGCATGCGTGTGACGCTAGTCGTCTTCGATTCTTCCAGAGCTCGAATTTTGTTTCCAGGATTGAACCGCATTCGATCTCTCAAGGGATTTGGACAGATCATGATCAGGAGAGAAGTTTTTACAAAAACAACAGTGACAAGGTTCTTCCTCATAAGGAGATTATTGTTGGGATTGAAATGTTAAAGGGAATGAAGAAGGATGGAAGCAGATTGGTAATGGAACTTCCAATGAAAGAAAAAGTGATGAATTCTAAGGAAAATGAAGTTGGAGAAGACATGGTAGTGATGGATTATGCACAACCCCATAGAAAGCCTCCTATTCACAATGAAAGACCCTAGATATATATATACATATATGTAATGTAATAGTTCTCAAATTTGCCATCAATATCTAAATATGTTTCAAAAATTAAAGTCTTTTTTTTATATATATATTTTGGAATAAAGAAAAAAGAAT ATGGCTATGCCTTGTTTCTTTCTCACTCTTTTATTCTTCTTATCTACGTTGCATGCGTGTGACGCTAGTCGTCTTCGATTCTTCCAGAGCTCGAATTTTGTTTCCAGGATTGAACCGCATTCGATCTCTCAAGGGATTTGGACAGATCATGATCAGGAGAGAAGTTTTTACAAAAACAACAGTGACAAGGTTCTTCCTCATAAGGAGATTATTGTTGGGATTGAAATGTTAAAGGGAATGAAGAAGGATGGAAGCAGATTGGTAATGGAACTTCCAATGAAAGAAAAAGTGATGAATTCTAAGGAAAATGAAGTTGGAGAAGACATGGTAGTGATGGATTATGCACAACCCCATAGAAAGCCTCCTATTCACAATGAAAGACCCTAG MAMPCFFLTLLFFLSTLHACDASRLRFFQSSNFVSRIEPHSISQGIWTDHDQERSFYKNNSDKVLPHKEIIVGIEMLKGMKKDGSRLVMELPMKEKVMNSKENEVGEDMVVMDYAQPHRKPPIHNERP Homology
BLAST of Pay0005359 vs. ExPASy Swiss-Prot
Match: Q93VK8 (Protein GOLVEN 1 OS=Arabidopsis thaliana OX=3702 GN=GLV1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 19/24 (79.17%), Postives = 22/24 (91.67%), Query Frame = 0
BLAST of Pay0005359 vs. ExPASy TrEMBL
Match: A0A0A0L298 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G020610 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50 Identity = 109/130 (83.85%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of Pay0005359 vs. ExPASy TrEMBL
Match: A0A6J1DKL1 (uncharacterized protein LOC111021396 OS=Momordica charantia OX=3673 GN=LOC111021396 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19 Identity = 77/132 (58.33%), Postives = 87/132 (65.91%), Query Frame = 0
BLAST of Pay0005359 vs. ExPASy TrEMBL
Match: A0A6J1KZM9 (uncharacterized protein LOC111498521 OS=Cucurbita maxima OX=3661 GN=LOC111498521 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 4.8e-19 Identity = 73/139 (52.52%), Postives = 88/139 (63.31%), Query Frame = 0
BLAST of Pay0005359 vs. ExPASy TrEMBL
Match: A0A6S7NRQ9 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS30448 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.6e-06 Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 0
BLAST of Pay0005359 vs. ExPASy TrEMBL
Match: A0A6P6TWI6 (uncharacterized protein LOC113705039 OS=Coffea arabica OX=13443 GN=LOC113705039 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.9e-06 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of Pay0005359 vs. NCBI nr
Match: XP_011650407.1 (uncharacterized protein LOC105434783 [Cucumis sativus] >KGN55873.1 hypothetical protein Csa_010787 [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 2.2e-50 Identity = 109/130 (83.85%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of Pay0005359 vs. NCBI nr
Match: XP_038905997.1 (uncharacterized protein LOC120091906 isoform X2 [Benincasa hispida]) HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45 Identity = 102/126 (80.95%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of Pay0005359 vs. NCBI nr
Match: XP_038905996.1 (uncharacterized protein LOC120091906 isoform X1 [Benincasa hispida]) HSP 1 Score: 188.7 bits (478), Expect = 3.1e-44 Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of Pay0005359 vs. NCBI nr
Match: KAG7028383.1 (Root meristem growth factor 6 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107.8 bits (268), Expect = 6.8e-20 Identity = 73/137 (53.28%), Postives = 91/137 (66.42%), Query Frame = 0
BLAST of Pay0005359 vs. NCBI nr
Match: XP_023540680.1 (uncharacterized protein LOC111800973 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107.5 bits (267), Expect = 8.9e-20 Identity = 74/137 (54.01%), Postives = 90/137 (65.69%), Query Frame = 0
BLAST of Pay0005359 vs. TAIR 10
Match: AT4G16515.1 (Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). ) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-05 Identity = 19/24 (79.17%), Postives = 22/24 (91.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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